; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G18790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G18790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr4:16316681..16317412
RNA-Seq ExpressionCSPI04G18790
SyntenyCSPI04G18790
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571896.1 E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia]1.7e-7561.18Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        ME+QISRY    VEV  D+P  ++IPK PS IE IGL+FTLRRR + F+V ENGER+L++++E  K+PLCD+QF  EIFN D  SLF  L CSF+N++ +
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN
        IDAE VA  LIE+WIEIR++ NSRS D+VF MTVNLTI  +V +Y +G  GS  GG+   +VPAC  A+ KML+RLE  +E + +CVICLDE+   KKKN
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN

Query:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI
        GR GL+MPCLHVFHG CIE+W KNSH CPICRFE+PI
Subjt:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI

XP_011654386.1 RING finger protein 141 [Cucumis sativus]2.0e-13798.77Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        MEYQISRYSTTAVEVDIDVPKWTKIPK PSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR
        IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR

Query:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGEDS
        IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSD  EDS
Subjt:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGEDS

XP_016901804.1 PREDICTED: RING finger protein 141-like [Cucumis melo]5.0e-12085.95Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        MEYQIS+YSTTAVE+DID+P   +I K PSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQE SKVPLCDHQFPVEIFNGD +SLFQYLCCSFENYE K
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR
        IDAEVVA+ LIEQWI IR+Q+NSRS  KVFSMTVNLTITDVV+QYV+GEDGS+FGGED R VPACDKALKKMLKRLE+R+EDER+C+ICLDEV KKKNGR
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR

Query:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED
         GLEMPCLHVFHGKCIENW KNSHCCPICRF+MPISS FGED
Subjt:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED

XP_022952293.1 ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucurbita moschata]8.3e-7560.34Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        ME+QISRY    VEV  D+P  ++IPK PS IE IGL+FTLRRR + F+V ENGER+L++++E  K+PLCD+QF  EIFN D  SLF  L CSF+N++ +
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN
        IDAE VA  LIE+WIEIR++ NSRS D+VF MTVNLT+  +V +Y +G  GS  GG+   +VPAC  A+ KML+RL+  +E + +CVICLDE+   KKKN
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN

Query:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI
        GR GL+MPCLHVFHG CIE+W KNSH CPICRFE+PI
Subjt:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI

XP_023511497.1 ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucurbita pepo subsp. pepo]2.4e-7460.34Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        ME+QISRY +  VEV  D+P  ++IPK PS IE IGL+FTLRRR + F+V ENGER+L++++E  K+PLCD+QF  EIFN D  SLF  L CSF+N++ +
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN
        IDAE VA  LIE+WIEIR++ NSRS D+VF MTVNLTI  +V +Y +G  GS  GG+   +VPAC  A+ KML+RL+  +E + +CVICLDE+   KKKN
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN

Query:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI
        GR  L+MPCLHVFHG CIE+W KNSH CPICRFE+PI
Subjt:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI

TrEMBL top hitse value%identityAlignment
A0A0A0L236 RING-type domain-containing protein9.7e-13898.77Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        MEYQISRYSTTAVEVDIDVPKWTKIPK PSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR
        IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR

Query:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGEDS
        IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSD  EDS
Subjt:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGEDS

A0A1S4E0Q9 RING finger protein 141-like2.4e-12085.95Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        MEYQIS+YSTTAVE+DID+P   +I K PSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQE SKVPLCDHQFPVEIFNGD +SLFQYLCCSFENYE K
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR
        IDAEVVA+ LIEQWI IR+Q+NSRS  KVFSMTVNLTITDVV+QYV+GEDGS+FGGED R VPACDKALKKMLKRLE+R+EDER+C+ICLDEV KKKNGR
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR

Query:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED
         GLEMPCLHVFHGKCIENW KNSHCCPICRF+MPISS FGED
Subjt:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED

A0A5A7SNF1 RING finger protein 141-like2.4e-12085.95Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        MEYQIS+YSTTAVE+DID+P   +I K PSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQE SKVPLCDHQFPVEIFNGD +SLFQYLCCSFENYE K
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR
        IDAEVVA+ LIEQWI IR+Q+NSRS  KVFSMTVNLTITDVV+QYV+GEDGS+FGGED R VPACDKALKKMLKRLE+R+EDER+C+ICLDEV KKKNGR
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGR

Query:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED
         GLEMPCLHVFHGKCIENW KNSHCCPICRF+MPISS FGED
Subjt:  IGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED

A0A6J1GK53 ERAD-associated E3 ubiquitin-protein ligase HRD1-like4.0e-7560.34Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        ME+QISRY    VEV  D+P  ++IPK PS IE IGL+FTLRRR + F+V ENGER+L++++E  K+PLCD+QF  EIFN D  SLF  L CSF+N++ +
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN
        IDAE VA  LIE+WIEIR++ NSRS D+VF MTVNLT+  +V +Y +G  GS  GG+   +VPAC  A+ KML+RL+  +E + +CVICLDE+   KKKN
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN

Query:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI
        GR GL+MPCLHVFHG CIE+W KNSH CPICRFE+PI
Subjt:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI

A0A6J1I8N9 ERAD-associated E3 ubiquitin-protein ligase HRD1-like2.2e-7358.75Show/hide
Query:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK
        ME+QISRY    VEV  D+P  ++IPK PS IE IGL+FTLR R + F+V E+GER+L++++E  K+PLCD+QF  EIFN D  SLF  L  SF+N++ +
Subjt:  MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESK

Query:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN
        IDAE VA  LIE+WIEIR++ NSRS D+VF MTVNLT+  +V +Y +G  GS  GG+   +VPAC  A+ KML+RLE  +E + +CVICLDE+   KKKN
Subjt:  IDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEV--GKKKN

Query:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSD
        GR GL+MPCLHVFHG CIE+W KNSH CPICRFE+PI  +
Subjt:  GRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSD

SwissProt top hitse value%identityAlignment
Q3T0W3 E3 ubiquitin-protein ligase RNF1812.2e-0934.88Show/hide
Query:  DHRVVPACDKALKKMLKRLEMR-EEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED
        DH + P   K   + L R  +R  + E  C +CL E  +++     +EMPC H+FH  CI  W   ++ CP+CR E+P   D  E+
Subjt:  DHRVVPACDKALKKMLKRLEMR-EEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED

Q6AXU4 E3 ubiquitin-protein ligase RNF1812.8e-0934.88Show/hide
Query:  DHRVVPACDKALKKMLKRLEMR-EEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED
        +H + P   KA+ + L R  +R  + E  C +CL E  +++     +EMPC H+FH  CI  W   ++ CP+CR E+P   D  E+
Subjt:  DHRVVPACDKALKKMLKRLEMR-EEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED

Q8GXF8 E3 ubiquitin-protein ligase SGR9, amyloplastic4.8e-0946.43Show/hide
Query:  CVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGE
        CVIC +E+ +   GR   EMPC H FH KCI  W    + CP CRF++P    F E
Subjt:  CVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGE

Q9LQX2 E3 ubiquitin-protein ligase MPSR12.2e-0948.21Show/hide
Query:  ERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSD
        E  CVICL+E   ++  +   EMPC H FHG CIE W      CP+CR+EMP+  D
Subjt:  ERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSD

Q9P0P0 E3 ubiquitin-protein ligase RNF1814.4e-1034.88Show/hide
Query:  DHRVVPACDKALKKMLKRLEMR-EEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED
        DH + P   K + + L R  +R  + E  C +CL E  +++     +EMPC H+FH  CI  W   ++ CP+CR+E+P   D  E+
Subjt:  DHRVVPACDKALKKMLKRLEMR-EEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDFGED

Arabidopsis top hitse value%identityAlignment
AT1G14200.1 RING/U-box superfamily protein2.8e-1240Show/hide
Query:  EDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERV---CVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI
        +D  + GG+  R  PA    ++ M  R+ + E+ E+    C ICLDE  K   G +  EMPC H FH KC+E W      CP+CR+EMP+
Subjt:  EDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERV---CVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPI

AT1G21960.1 RING/U-box superfamily protein7.4e-1328.48Show/hide
Query:  FQYLCCSFENYESKIDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQY---VVGEDGSTFGGEDHRVV---PA----CDKALKKMLKRL
        ++ +  S+ N   K++  + ++ L EQ+++I N   +    K  SM  +     +V  Y   +V     +F    + +    PA     D+  +K+  + 
Subjt:  FQYLCCSFENYESKIDAEVVASVLIEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQY---VVGEDGSTFGGEDHRVV---PA----CDKALKKMLKRL

Query:  EMREEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMP
        +    D  VC ICL+E  K   G I + +PC H F   CI  WF   H CP+CRFE+P
Subjt:  EMREEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMP

AT1G26800.1 RING/U-box superfamily protein1.5e-1048.21Show/hide
Query:  ERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSD
        E  CVICL+E   ++  +   EMPC H FHG CIE W      CP+CR+EMP+  D
Subjt:  ERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSD

AT3G15740.1 RING/U-box superfamily protein2.2e-1239Show/hide
Query:  LQYVVGEDGSTFGGEDHR--------VVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMP
        +Q  +G   S F GED          V PA D+A++  L+ L +  E+E  CVIC+D +    +   G  MPC HVFH  C E W +NS  CP+CR   P
Subjt:  LQYVVGEDGSTFGGEDHR--------VVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMP

AT5G56340.1 RING/U-box superfamily protein2.0e-1032.69Show/hide
Query:  DVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDF
        D++LQ++   D +  G       P   K   + L  +++ E  +  C +CLD+  K   G    EMPC H FH +CI  W +    CP+CRFE+P S+D 
Subjt:  DVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWFKNSHCCPICRFEMPISSDF

Query:  GEDS
         +++
Subjt:  GEDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATCAAATCTCTCGATACTCAACTACGGCAGTGGAAGTAGATATAGATGTTCCGAAGTGGACAAAAATCCCGAAGCAACCATCACCAATCGAACTAATTGGCTT
GCTCTTCACCCTACGTCGTCGTTGCAACCGCTTTCAGGTGCTGGAGAACGGTGAACGACAATTAGTAGAGGAACAAGAGATATCAAAAGTTCCTCTATGCGACCACCAAT
TCCCTGTTGAAATATTTAATGGAGACAGCAGTTCTCTGTTCCAATACCTCTGTTGTAGCTTCGAAAACTACGAATCTAAAATTGATGCAGAGGTGGTAGCAAGTGTCCTA
ATCGAGCAGTGGATTGAAATAAGGAACCAAGTGAATTCGAGAAGCCGAGATAAAGTATTTTCAATGACGGTGAATTTGACAATCACAGATGTTGTGCTTCAATATGTTGT
TGGCGAAGACGGCAGCACATTTGGTGGAGAAGATCATAGAGTGGTTCCAGCATGCGACAAAGCTCTTAAGAAGATGTTGAAGAGATTGGAAATGAGAGAGGAAGATGAAA
GAGTTTGTGTGATATGTTTGGATGAAGTTGGGAAAAAGAAGAATGGAAGGATTGGTTTGGAAATGCCTTGTTTACATGTGTTTCATGGGAAATGCATTGAAAATTGGTTC
AAAAATAGCCATTGTTGTCCAATTTGTAGATTTGAAATGCCAATCAGTTCAGACTTTGGTGAAGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATATCAAATCTCTCGATACTCAACTACGGCAGTGGAAGTAGATATAGATGTTCCGAAGTGGACAAAAATCCCGAAGCAACCATCACCAATCGAACTAATTGGCTT
GCTCTTCACCCTACGTCGTCGTTGCAACCGCTTTCAGGTGCTGGAGAACGGTGAACGACAATTAGTAGAGGAACAAGAGATATCAAAAGTTCCTCTATGCGACCACCAAT
TCCCTGTTGAAATATTTAATGGAGACAGCAGTTCTCTGTTCCAATACCTCTGTTGTAGCTTCGAAAACTACGAATCTAAAATTGATGCAGAGGTGGTAGCAAGTGTCCTA
ATCGAGCAGTGGATTGAAATAAGGAACCAAGTGAATTCGAGAAGCCGAGATAAAGTATTTTCAATGACGGTGAATTTGACAATCACAGATGTTGTGCTTCAATATGTTGT
TGGCGAAGACGGCAGCACATTTGGTGGAGAAGATCATAGAGTGGTTCCAGCATGCGACAAAGCTCTTAAGAAGATGTTGAAGAGATTGGAAATGAGAGAGGAAGATGAAA
GAGTTTGTGTGATATGTTTGGATGAAGTTGGGAAAAAGAAGAATGGAAGGATTGGTTTGGAAATGCCTTGTTTACATGTGTTTCATGGGAAATGCATTGAAAATTGGTTC
AAAAATAGCCATTGTTGTCCAATTTGTAGATTTGAAATGCCAATCAGTTCAGACTTTGGTGAAGATTCTTGA
Protein sequenceShow/hide protein sequence
MEYQISRYSTTAVEVDIDVPKWTKIPKQPSPIELIGLLFTLRRRCNRFQVLENGERQLVEEQEISKVPLCDHQFPVEIFNGDSSSLFQYLCCSFENYESKIDAEVVASVL
IEQWIEIRNQVNSRSRDKVFSMTVNLTITDVVLQYVVGEDGSTFGGEDHRVVPACDKALKKMLKRLEMREEDERVCVICLDEVGKKKNGRIGLEMPCLHVFHGKCIENWF
KNSHCCPICRFEMPISSDFGEDS