| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032310.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.8e-160 | 60.53 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE----LNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV EE LNGAT+F+KIDLKS YHQIRM DI K AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE----LNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEF+VMPFGLTNAP+TFQ+LMN+IF+P+L KFVLVFFDDILIYSK KDH+ H+ V LRK+ L+ANKKKC+F Q +V+YL HIISG+GVEVD EK+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
+A+ WP N+RE W K+ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVIQPQYQKW+SKLL YSFEVVYKPGLENKAA ALSR P +Q
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ------------------------------GHSGFLRTYKRMAAELH
LN ++ +D+E IK EV++DEKLK I LN+ +E + K+++K GHSGFLRTYKR+A+EL+
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ------------------------------GHSGFLRTYKRMAAELH
|
|
| TYK02195.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-163 | 61.13 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV E ELNGAT+F+KIDLKSGYHQIRM DI K AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEF+VMPFGLTNAP+TFQ+LMN+IF+P+LRKFVLVFFDDILIYSK KDH+ H+ V LRK+ L+ANKKKC+F Q +V+YL HIISG+GVEVD EK+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
+A+ WP N+RE W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVIQPQYQKW+SKLLGYSFEVVYKPGLENKAA ALSR P +Q
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ------------------------------GHSGFLRTYKRMAAELH
LN ++ +D+E IK EV++DEKLK I+ LNE +E + K+++K GHSGFLRTYKR+A+EL+
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ------------------------------GHSGFLRTYKRMAAELH
|
|
| TYK15990.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.4e-159 | 61.54 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPV+E ELNGA +F+KIDLK+GYHQIRM DIEK AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEFMVMPFGLTNAPSTFQ+LMN +FKP+LR+FVLVFFDDILIYSKG+++H H+ VLE+LR++ LYAN KC FA+ R+ YL H IS G+EVDPEK+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
A+K+WP ANVRE WT+ET+ AF +LK++MMTLPVLA+PDF++PFEIE+DASG+G+GA
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
+S L+ RDR +PVYERELMAVV AVQRWRPYLLG+KF VKTDQRSLKFLLEQRVIQPQYQ+WI+KLLGYSFEV+YKPGLENKAA ALSR+ T
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE--------TEERKDGKY----------------------SMKQGHSGFLRTYKRMAAELH
LNQLT ++D+EVI+ EV +D L+ I+ + E T + K+ S+ GHSGFLRTYKRMA EL+
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE--------TEERKDGKY----------------------SMKQGHSGFLRTYKRMAAELH
|
|
| TYK23090.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.4e-159 | 61.54 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPV+E ELNGA +F+KIDLK+GYHQIRM DIEK AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEFMVMPFGLTNAPSTFQ+LMN +FKP+LR+FVLVFFDDILIYSKG+++H H+ VLE+LR++ LYAN KC FA+ R+ YL H IS G+EVDPEK+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
A+K+WP ANVRE WT+ET+ AF +LK++MMTLPVLA+PDF++PFEIE+DASG+G+GA
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
+S L+ RDR +PVYERELMAVV AVQRWRPYLLG+KF VKTDQRSLKFLLEQRVIQPQYQ+WI+KLLGYSFEV+YKPGLENKAA ALSR+ T
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE--------TEERKDGKY----------------------SMKQGHSGFLRTYKRMAAELH
LNQLT ++D+EVI+ EV +D L+ I+ + E T + K+ S+ GHSGFLRTYKRMA EL+
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE--------TEERKDGKY----------------------SMKQGHSGFLRTYKRMAAELH
|
|
| TYK23779.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.0e-162 | 60.61 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYR +NN T+PDKFPIPV E ELNGAT+F+KIDLKSGYHQIRM DI K AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEF+VMPFGLTNAP+TFQ+LMN+IF+P+LRKFVLVFFDDILIYSK KDH+ H+ V LRK+ L+ANKKKC+F Q +V+YL HIISG+GVEVD EK+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
+ + WP N+RE W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVIQPQYQKW+SKLLGYSFEVVYKPGLENKAA ALSR P +Q
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ-------------------------------GHSGFLRTYKRMAAELH
LN ++ +D+E IK EV++DEKLK I+ LNE +E + K+++K GHSGFLRTYKR+A+EL+
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ-------------------------------GHSGFLRTYKRMAAELH
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNE3 Ty3/gypsy retrotransposon protein | 1.8e-160 | 60.53 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE----LNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV EE LNGAT+F+KIDLKS YHQIRM DI K AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE----LNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEF+VMPFGLTNAP+TFQ+LMN+IF+P+L KFVLVFFDDILIYSK KDH+ H+ V LRK+ L+ANKKKC+F Q +V+YL HIISG+GVEVD EK+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
+A+ WP N+RE W K+ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVIQPQYQKW+SKLL YSFEVVYKPGLENKAA ALSR P +Q
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ------------------------------GHSGFLRTYKRMAAELH
LN ++ +D+E IK EV++DEKLK I LN+ +E + K+++K GHSGFLRTYKR+A+EL+
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ------------------------------GHSGFLRTYKRMAAELH
|
|
| A0A5A7T6B1 Transposon Ty3-G Gag-Pol polyprotein | 1.2e-159 | 60.12 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV E ELNGAT+F+KIDLKSGYHQIRM DI K AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEF+VMPFGLTNAP+TFQ+LMN+IF+P+LRKFVLVFFDDILIYSK KDH+ H+ V LRK+ L+ANKKKC+F Q +V+YL HIISG+GVEVD +K+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
+A+ WP N+RE W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+ A
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQ+VIQPQYQKW+SKLLGYSFEVVYKP LENKAA ALSR P +Q
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ-------------------------------GHSGFLRTYKRMAAEL
LN ++ +D+E IK EV++DEKLK I+ LNE +E + K+++K GHSGFLRTYKR+A L
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ-------------------------------GHSGFLRTYKRMAAEL
|
|
| A0A5D3BSP2 Ty3/gypsy retrotransposon protein | 1.8e-163 | 61.13 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV E ELNGAT+F+KIDLKSGYHQIRM DI K AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEF+VMPFGLTNAP+TFQ+LMN+IF+P+LRKFVLVFFDDILIYSK KDH+ H+ V LRK+ L+ANKKKC+F Q +V+YL HIISG+GVEVD EK+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
+A+ WP N+RE W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVIQPQYQKW+SKLLGYSFEVVYKPGLENKAA ALSR P +Q
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ------------------------------GHSGFLRTYKRMAAELH
LN ++ +D+E IK EV++DEKLK I+ LNE +E + K+++K GHSGFLRTYKR+A+EL+
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ------------------------------GHSGFLRTYKRMAAELH
|
|
| A0A5D3CXB1 Ty3/gypsy retrotransposon protein | 1.2e-159 | 61.54 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPV+E ELNGA +F+KIDLK+GYHQIRM DIEK AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEFMVMPFGLTNAPSTFQ+LMN +FKP+LR+FVLVFFDDILIYSKG+++H H+ VLE+LR++ LYAN KC FA+ R+ YL H IS G+EVDPEK+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
A+K+WP ANVRE WT+ET+ AF +LK++MMTLPVLA+PDF++PFEIE+DASG+G+GA
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
+S L+ RDR +PVYERELMAVV AVQRWRPYLLG+KF VKTDQRSLKFLLEQRVIQPQYQ+WI+KLLGYSFEV+YKPGLENKAA ALSR+ T
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE--------TEERKDGKY----------------------SMKQGHSGFLRTYKRMAAELH
LNQLT ++D+EVI+ EV +D L+ I+ + E T + K+ S+ GHSGFLRTYKRMA EL+
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE--------TEERKDGKY----------------------SMKQGHSGFLRTYKRMAAELH
|
|
| A0A5D3DKH5 Ty3/gypsy retrotransposon protein | 1.9e-162 | 60.61 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYR +NN T+PDKFPIPV E ELNGAT+F+KIDLKSGYHQIRM DI K AFRTHEG
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE----ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
YEF+VMPFGLTNAP+TFQ+LMN+IF+P+LRKFVLVFFDDILIYSK KDH+ H+ V LRK+ L+ANKKKC+F Q +V+YL HIISG+GVEVD EK+
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
+ + WP N+RE W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA
Subjt: EAIKKWPVLANVRE-----------------------------------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------
Query: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVIQPQYQKW+SKLLGYSFEVVYKPGLENKAA ALSR P +Q
Subjt: ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQ
Query: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ-------------------------------GHSGFLRTYKRMAAELH
LN ++ +D+E IK EV++DEKLK I+ LNE +E + K+++K GHSGFLRTYKR+A+EL+
Subjt: LNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQ-------------------------------GHSGFLRTYKRMAAELH
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 8.9e-64 | 36.07 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGS-----WRFCVDYRALNNVTVPDKFPIPVIEELNG----ATMFTKIDLKSGYHQIRMCTYDIEKIAF
+E +++ML GIIR S SPY+SP+ +V KK + +R +DYR LN +TV D+ PIP ++E+ G FT IDL G+HQI M + K AF
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGS-----WRFCVDYRALNNVTVPDKFPIPVIEELNG----ATMFTKIDLKSGYHQIRMCTYDIEKIAF
Query: RTHEGRYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEV
T G YE++ MPFGL NAP+TFQ MN I +P L K LV+ DDI+++S L +HL + V E L K L KC F + +L H+++ DG++
Subjt: RTHEGRYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEV
Query: DPEKVEAIKKWPVLANVRE------------------------WTK-------------ETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA
+PEK+EAI+K+P+ +E TK E AF +LK + P+L +PDF+ F + TDAS LGA
Subjt: DPEKVEAIKKWPVLANVRE------------------------WTK-------------ETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA
Query: -----------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALS
S TL + E+EL+A+V A + +R YLLG+ F + +D + L +L + + +W KL + F++ Y G EN A ALS
Subjt: -----------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALS
Query: RV
R+
Subjt: RV
|
|
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 8.1e-65 | 37.06 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTVPDKFPIPVIEELNG----ATMFTKIDLKSGYHQIRMCTYDIEKIAF
+E V+EML G+IR S SPY+SP +V KK +R +DYR LN +T+PD++PIP ++E+ G FT IDL G+HQI M I K AF
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTVPDKFPIPVIEELNG----ATMFTKIDLKSGYHQIRMCTYDIEKIAF
Query: RTHEGRYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEV
T G YE++ MPFGL NAP+TFQ MN I +P L K LV+ DDI+I+S L +HLN ++ V L L KC F + ++L HI++ DG++
Subjt: RTHEGRYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEV
Query: DPEKVEAIKKWPV--------------------LANVREWTK------------ETQ-----EAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA
+P KV+AI +P+ + N + K +TQ EAF +LK ++ P+L LPDF F + TDAS LGA
Subjt: DPEKVEAIKKWPV--------------------LANVREWTK------------ETQ-----EAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA
Query: -----------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALS
S TL + E+EL+A+V A + +R YLLG++FL+ +D + L++L + + ++W +L Y F++ Y G EN A ALS
Subjt: -----------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALS
Query: RV
R+
Subjt: RV
|
|
| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 4.8e-57 | 33.71 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEEL----NGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
+ ++V+++L + I PS SP SSPV+LV KKDG++R CVDYR LN T+ D FP+P I+ L A +FT +DL SGYHQI M D K AF T G
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEEL----NGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
+YE+ VMPFGL NAPSTF M F+ +FV V+ DDILI+S+ ++H H+ VLE L+ L KKKC FA ++L + I + K
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVR----------------------------------EWTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA--------
AI+ +P V+ +WT++ +A +LK ++ PVL + + + TDAS G+GA
Subjt: EAIKKWPVLANVR----------------------------------EWTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA--------
Query: ---------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRV
+S +L + P E EL+ ++ A+ +R L GK F ++TD SL L + + Q+W+ L Y F + Y G +N A A+SR
Subjt: ---------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRV
Query: PATVQLNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE
T+ TS ID E K+ D ++ + E
Subjt: PATVQLNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE
|
|
| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 3.4e-63 | 34.11 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKK-----DGSWRFCVDYRALNNVTVPDKFPIP----VIEELNGATMFTKIDLKSGYHQIRMCTYDIEKIAF
+ER ++E+L GIIRPS SPY+SP+ +V KK + +R VD++ LN VT+PD +PIP + L A FT +DL SG+HQI M DI K AF
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKK-----DGSWRFCVDYRALNNVTVPDKFPIP----VIEELNGATMFTKIDLKSGYHQIRMCTYDIEKIAF
Query: RTHEGRYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEV
T G+YEF+ +PFGL NAP+ FQ +++ I + ++ K V+ DDI+++S+ H ++R VL L K L N +K F +V++L +I++ DG++
Subjt: RTHEGRYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEV
Query: DPEKVEAIKKWPVLANVREWTK----------------------------------------------ETQ-EAFNRLKQSMMTLPVLALPDFSVPFEIE
DP+KV AI + P +V+E + ET ++FN LK + + +LA P F+ PF +
Subjt: DPEKVEAIKKWPVLANVREWTK----------------------------------------------ETQ-EAFNRLKQSMMTLPVLALPDFSVPFEIE
Query: TDASGYGLGA---------------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFL-VKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEV
TDAS + +GA S +L + E+E++A++ ++ R YL G + V TD + L F L R + ++W +++ Y+ E+
Subjt: TDASGYGLGA---------------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFL-VKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEV
Query: VYKPGLENKAAYALSRVPATVQLNQLTT
+YKPG N A ALSR+P QLNQL+T
Subjt: VYKPGLENKAAYALSRVPATVQLNQLTT
|
|
| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 2.1e-57 | 33.71 | Show/hide |
Query: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEEL----NGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
+ ++V+++L + I PS SP SSPV+LV KKDG++R CVDYR LN T+ D FP+P I+ L A +FT +DL SGYHQI M D K AF T G
Subjt: MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEEL----NGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEG
Query: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
+YE+ VMPFGL NAPSTF M F+ +FV V+ DDILI+S+ ++H H+ VLE L+ L KKKC FA ++L + I + K
Subjt: RYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKV
Query: EAIKKWPVLANVR----------------------------------EWTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA--------
AI+ +P V+ +WT++ +A ++LK ++ PVL + + + TDAS G+GA
Subjt: EAIKKWPVLANVR----------------------------------EWTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA--------
Query: ---------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRV
+S +L + P E EL+ ++ A+ +R L GK F ++TD SL L + + Q+W+ L Y F + Y G +N A A+SR
Subjt: ---------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRV
Query: PATVQLNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE
T+ TS ID E K+ D ++ + E
Subjt: PATVQLNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNE
|
|
