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CSPI04G19230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G19230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein MODIFIER OF SNC1 11-like isoform X1
Genome locationChr4:16889150..16889522
RNA-Seq ExpressionCSPI04G19230
SyntenyCSPI04G19230
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580577.1 WRKY transcription factor 44, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1072.22Show/hide
Query:  DLPSPTATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS-CVDPS
        DLPS  ATDFT ELS+N LPG K  LPL+ G AAAGNG VDQHQNRRS  V PS
Subjt:  DLPSPTATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS-CVDPS

XP_004137795.1 protein MODIFIER OF SNC1 11 isoform X2 [Cucumis sativus]1.4e-1393.02Show/hide
Query:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRSC
        ATDFT+ELSKNTLPG KQTLPL FGIAAAGNGHVDQHQNRRSC
Subjt:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRSC

XP_008442609.1 PREDICTED: protein MODIFIER OF SNC1 11-like isoform X1 [Cucumis melo]6.6e-1185.71Show/hide
Query:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS
        ATDF  ELS+NTLPG KQTLPLDFGI AAGNGHVDQHQNR S
Subjt:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS

XP_008442610.1 PREDICTED: uncharacterized protein LOC103486433 isoform X2 [Cucumis melo]6.6e-1185.71Show/hide
Query:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS
        ATDF  ELS+NTLPG KQTLPLDFGI AAGNGHVDQHQNR S
Subjt:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS

XP_011651924.1 protein MODIFIER OF SNC1 11 isoform X1 [Cucumis sativus]1.4e-1393.02Show/hide
Query:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRSC
        ATDFT+ELSKNTLPG KQTLPL FGIAAAGNGHVDQHQNRRSC
Subjt:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRSC

TrEMBL top hitse value%identityAlignment
A0A0A0LDV0 Tho1_MOS11_C domain-containing protein6.9e-1493.02Show/hide
Query:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRSC
        ATDFT+ELSKNTLPG KQTLPL FGIAAAGNGHVDQHQNRRSC
Subjt:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRSC

A0A1S3B640 protein MODIFIER OF SNC1 11-like isoform X13.2e-1185.71Show/hide
Query:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS
        ATDF  ELS+NTLPG KQTLPLDFGI AAGNGHVDQHQNR S
Subjt:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS

A0A1S3B6R5 uncharacterized protein LOC103486433 isoform X23.2e-1185.71Show/hide
Query:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS
        ATDF  ELS+NTLPG KQTLPLDFGI AAGNGHVDQHQNR S
Subjt:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS

A0A5D3DNB7 Protein MODIFIER OF SNC1 11-like isoform X13.2e-1185.71Show/hide
Query:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS
        ATDF  ELS+NTLPG KQTLPLDFGI AAGNGHVDQHQNR S
Subjt:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS

A0A6J1F8Q7 protein MODIFIER OF SNC1 11-like8.7e-0972.92Show/hide
Query:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS-CVDPS
        ATDFT ELS+N LPG K  LPL+ G AAAGNG VDQHQNRRS  V PS
Subjt:  ATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRS-CVDPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACCCCGTCCCCCGCCAATTCTTCCGTTTCAACATTCATCTCAACGCTTTTCTGTCGGTTCTCCATTTTGTTTGGTTCCCGCCGTCGACATCCGCATTTTTCGTT
TTTCGGCGAGCTGTTCACTGCATCAAAAAGTCTCGATCTTCCTTCTCCAACGGCGACCGATTTCACAAGAGAATTGAGCAAAAACACTCTTCCAGGTTCGAAGCAAACCC
TACCCCTAGATTTTGGAATTGCAGCCGCTGGTAATGGCCACGTAGATCAACACCAAAATCGTCGTTCTTGCGTAGATCCATCGATTTGGGATCCTCGAGCTGAGAGGCGT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGATACCCCGTCCCCCGCCAATTCTTCCGTTTCAACATTCATCTCAACGCTTTTCTGTCGGTTCTCCATTTTGTTTGGTTCCCGCCGTCGACATCCGCATTTTTCGTT
TTTCGGCGAGCTGTTCACTGCATCAAAAAGTCTCGATCTTCCTTCTCCAACGGCGACCGATTTCACAAGAGAATTGAGCAAAAACACTCTTCCAGGTTCGAAGCAAACCC
TACCCCTAGATTTTGGAATTGCAGCCGCTGGTAATGGCCACGTAGATCAACACCAAAATCGTCGTTCTTGCGTAGATCCATCGATTTGGGATCCTCGAGCTGAGAGGCGT
TGA
Protein sequenceShow/hide protein sequence
MDTPSPANSSVSTFISTLFCRFSILFGSRRRHPHFSFFGELFTASKSLDLPSPTATDFTRELSKNTLPGSKQTLPLDFGIAAAGNGHVDQHQNRRSCVDPSIWDPRAERR