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CSPI04G19340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G19340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontranscription factor bHLH101-like
Genome locationChr4:17041072..17042324
RNA-Seq ExpressionCSPI04G19340
SyntenyCSPI04G19340
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR015660 - Achaete-scute transcription factor-related


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026016.1 transcription factor bHLH101-like [Cucumis melo var. makuwa]1.1e-5093.28Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
        MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSS CAVNWLSETEALLQIALE+QTHTQLPFSQILLSLE+DGLLL TAS
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS

Query:  SFRSFNGRLFLTLLLQAKA
        SFRS NG LF TLLLQA A
Subjt:  SFRSFNGRLFLTLLLQAKA

TYK21927.1 transcription factor bHLH101-like protein [Cucumis melo var. makuwa]1.1e-5093.28Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
        MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSS CAVNWLSETEALLQIALE+QTHTQLPFSQILLSLE+DGLLL TAS
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS

Query:  SFRSFNGRLFLTLLLQAKA
        SFRS NG LF TLLLQA A
Subjt:  SFRSFNGRLFLTLLLQAKA

XP_004144366.2 transcription factor bHLH101 [Cucumis sativus]8.9e-66100Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
        MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS

Query:  SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL
        SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL
Subjt:  SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL

XP_008455701.1 PREDICTED: transcription factor bHLH101-like [Cucumis melo]2.5e-6093.43Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
        MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSS CAVNWLSETEALLQIALE+QTHTQLPFSQILLSLE+DGLLL TAS
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS

Query:  SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL
        SFRS NG LF TLLLQAKAN LPRVLQEILNKKL+PL
Subjt:  SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL

XP_038882377.1 transcription factor bHLH101-like [Benincasa hispida]3.9e-4579.56Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENL--KQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLT
        MSNPSTISKALKYIPELQQQVEGLRRRK+GLVTK+N   L  KQ RKNNK PWMSS CA+N LSETEALLQIA   +T  QLPFSQILLSLEEDGLLLLT
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENL--KQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLT

Query:  ASSFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLE
        ASSF+SF+GR F TLLLQ  ANT  RVLQEILNK+L+
Subjt:  ASSFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLE

TrEMBL top hitse value%identityAlignment
A0A0A0KYH3 Uncharacterized protein4.3e-66100Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
        MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS

Query:  SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL
        SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL
Subjt:  SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL

A0A1S3C1M0 transcription factor bHLH101-like1.2e-6093.43Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
        MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSS CAVNWLSETEALLQIALE+QTHTQLPFSQILLSLE+DGLLL TAS
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS

Query:  SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL
        SFRS NG LF TLLLQAKAN LPRVLQEILNKKL+PL
Subjt:  SFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKLEPL

A0A5A7SJN9 Transcription factor bHLH101-like5.1e-5193.28Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
        MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSS CAVNWLSETEALLQIALE+QTHTQLPFSQILLSLE+DGLLL TAS
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS

Query:  SFRSFNGRLFLTLLLQAKA
        SFRS NG LF TLLLQA A
Subjt:  SFRSFNGRLFLTLLLQAKA

A0A5D3DDY1 Transcription factor bHLH101-like protein5.1e-5193.28Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS
        MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSS CAVNWLSETEALLQIALE+QTHTQLPFSQILLSLE+DGLLL TAS
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTAS

Query:  SFRSFNGRLFLTLLLQAKA
        SFRS NG LF TLLLQA A
Subjt:  SFRSFNGRLFLTLLLQAKA

A0A6J1HRN3 transcription factor bHLH101-like6.3e-3364.71Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN---EENLKQIRKNNKEPWMS-SFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLL
        MSNP+TIS+ALKYIPEL+QQVE LRRRK+GL TK+N    +  KQ+RKN   PWM  S CAVNWL E EALLQ+   D    +L FSQIL SL+ED LL+
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN---EENLKQIRKNNKEPWMS-SFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLL

Query:  LTASSFRSFNGRLFLTLLLQAKANTLPRVLQEILNK
         T S+FR F+GR F TLL+QAK NT  RVLQEILNK
Subjt:  LTASSFRSFNGRLFLTLLLQAKANTLPRVLQEILNK

SwissProt top hitse value%identityAlignment
A2WZ60 Protein IRON-RELATED TRANSCRIPTION FACTOR 28.0e-0933.33Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLK------QIRKNNKEPWMSSFCAVNWLSETEALLQIA-LEDQTHTQLPFSQILLSLEEDG
        +S P+T+S+ LKYIPELQ+QVE L R+K+ L T  +  N K      Q+      P +S+ C    +++ E ++Q++ L +   + LP S+ +  LE +G
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLK------QIRKNNKEPWMSSFCAVNWLSETEALLQIA-LEDQTHTQLPFSQILLSLEEDG

Query:  LLLLTASSFRSFNGRLFLTLLLQAKANTL
        L  +++S+   F  R F ++ LQ    T+
Subjt:  LLLLTASSFRSFNGRLFLTLLLQAKANTL

Q0JFZ0 Protein IRON-RELATED TRANSCRIPTION FACTOR 28.0e-0933.33Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLK------QIRKNNKEPWMSSFCAVNWLSETEALLQIA-LEDQTHTQLPFSQILLSLEEDG
        +S P+T+S+ LKYIPELQ+QVE L R+K+ L T  +  N K      Q+      P +S+ C    +++ E ++Q++ L +   + LP S+ +  LE +G
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLK------QIRKNNKEPWMSSFCAVNWLSETEALLQIA-LEDQTHTQLPFSQILLSLEEDG

Query:  LLLLTASSFRSFNGRLFLTLLLQAKANTL
        L  +++S+   F  R F ++ LQ    T+
Subjt:  LLLLTASSFRSFNGRLFLTLLLQAKANTL

Q9FYE6 Transcription factor bHLH1012.2e-1135.25Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNK-----EPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL
        +S P T+++ +KYIPE +Q+++ L RRKE L+ +++ +  ++  +N       +   S   A NWL++TE  +QIA    T      S +LL LEE+GL 
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNK-----EPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL

Query:  LLTASSFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKL
        +++ SS  S   R+F TL LQ + +   R L+E++N  L
Subjt:  LLTASSFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKL

Q9M1K1 Transcription factor ORG26.1e-0934.71Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSF---CAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLL
        +S P T+SK+LKYIPELQQQV+ L ++KE ++ +++ +   ++    +   ++S+    +   L + E ++Q++   + H     S +L  +EEDG +L+
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSF---CAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLL

Query:  TASSFRSFNGRLFLTLLLQAK
          SS RS   RLF TL LQ +
Subjt:  TASSFRSFNGRLFLTLLLQAK

Q9ZVB5 Transcription factor bHLH1002.5e-1041.46Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN-EENLKQIRKNNK-EPWMSSFCAV---NWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL
        +S  +T+S+ALKYIPELQ+QV+ L ++KE L  +++ + +L    +N+K E  ++S+ +      LSETE ++QI+   QT  +  F  +L  +EEDGL+
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN-EENLKQIRKNNK-EPWMSSFCAV---NWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL

Query:  LLTASSFRSFNGRLFLTLLLQAK
        L+ ASS RS   RLF ++ LQ K
Subjt:  LLTASSFRSFNGRLFLTLLLQAK

Arabidopsis top hitse value%identityAlignment
AT2G41240.1 basic helix-loop-helix protein 1001.8e-1141.46Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN-EENLKQIRKNNK-EPWMSSFCAV---NWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL
        +S  +T+S+ALKYIPELQ+QV+ L ++KE L  +++ + +L    +N+K E  ++S+ +      LSETE ++QI+   QT  +  F  +L  +EEDGL+
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN-EENLKQIRKNNK-EPWMSSFCAV---NWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL

Query:  LLTASSFRSFNGRLFLTLLLQAK
        L+ ASS RS   RLF ++ LQ K
Subjt:  LLTASSFRSFNGRLFLTLLLQAK

AT2G41240.2 basic helix-loop-helix protein 1001.8e-1141.46Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN-EENLKQIRKNNK-EPWMSSFCAV---NWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL
        +S  +T+S+ALKYIPELQ+QV+ L ++KE L  +++ + +L    +N+K E  ++S+ +      LSETE ++QI+   QT  +  F  +L  +EEDGL+
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN-EENLKQIRKNNK-EPWMSSFCAV---NWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL

Query:  LLTASSFRSFNGRLFLTLLLQAK
        L+ ASS RS   RLF ++ LQ K
Subjt:  LLTASSFRSFNGRLFLTLLLQAK

AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.3e-1034.71Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSF---CAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLL
        +S P T+SK+LKYIPELQQQV+ L ++KE ++ +++ +   ++    +   ++S+    +   L + E ++Q++   + H     S +L  +EEDG +L+
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSF---CAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLL

Query:  TASSFRSFNGRLFLTLLLQAK
          SS RS   RLF TL LQ +
Subjt:  TASSFRSFNGRLFLTLLLQAK

AT3G56980.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.1e-0833.88Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSF---CAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLL
        +S P+T+S++LKYIPELQ+QV+ L ++KE L+ +++ +   +         ++++    +   L + E ++QI+   + H     S +L  LEED  +L+
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSF---CAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLL

Query:  TASSFRSFNGRLFLTLLLQAK
          SS RS   RLF TL LQ +
Subjt:  TASSFRSFNGRLFLTLLLQAK

AT5G04150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.6e-1235.25Show/hide
Query:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNK-----EPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL
        +S P T+++ +KYIPE +Q+++ L RRKE L+ +++ +  ++  +N       +   S   A NWL++TE  +QIA    T      S +LL LEE+GL 
Subjt:  MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNK-----EPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLL

Query:  LLTASSFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKL
        +++ SS  S   R+F TL LQ + +   R L+E++N  L
Subjt:  LLTASSFRSFNGRLFLTLLLQAKANTLPRVLQEILNKKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAATCCAAGCACAATATCAAAGGCATTGAAGTACATTCCAGAGCTTCAACAGCAAGTGGAGGGATTAAGGAGAAGGAAGGAAGGCCTTGTCACAAAGCTTAATGA
AGAAAATTTAAAGCAAATAAGAAAGAACAATAAGGAACCATGGATGAGTTCGTTTTGTGCTGTGAATTGGCTTAGTGAAACAGAAGCACTTCTTCAAATAGCCTTAGAAG
ATCAAACCCACACACAACTTCCTTTTTCACAAATTCTCCTCTCTCTGGAAGAGGATGGGCTTCTCCTCTTAACTGCTTCCTCTTTTCGATCCTTTAATGGGAGGCTCTTC
CTCACCTTACTCCTTCAGGCAAAGGCTAATACTCTTCCAAGAGTGCTGCAGGAGATCTTGAATAAAAAGCTCGAGCCATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAATCCAAGCACAATATCAAAGGCATTGAAGTACATTCCAGAGCTTCAACAGCAAGTGGAGGGATTAAGGAGAAGGAAGGAAGGCCTTGTCACAAAGCTTAATGA
AGAAAATTTAAAGCAAATAAGAAAGAACAATAAGGAACCATGGATGAGTTCGTTTTGTGCTGTGAATTGGCTTAGTGAAACAGAAGCACTTCTTCAAATAGCCTTAGAAG
ATCAAACCCACACACAACTTCCTTTTTCACAAATTCTCCTCTCTCTGGAAGAGGATGGGCTTCTCCTCTTAACTGCTTCCTCTTTTCGATCCTTTAATGGGAGGCTCTTC
CTCACCTTACTCCTTCAGGCAAAGGCTAATACTCTTCCAAGAGTGCTGCAGGAGATCTTGAATAAAAAGCTCGAGCCATTGTAG
Protein sequenceShow/hide protein sequence
MSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLNEENLKQIRKNNKEPWMSSFCAVNWLSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTASSFRSFNGRLF
LTLLLQAKANTLPRVLQEILNKKLEPL