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CSPI04G19350 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G19350
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription factor bHLH101-like
Genome locationChr4:17044159..17044698
RNA-Seq ExpressionCSPI04G19350
SyntenyCSPI04G19350
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026018.1 transcription factor bHLH101-like [Cucumis melo var. makuwa]5.8e-2790.28Show/hide
Query:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMI
        MEPF+QFSSLQPSQQVKLESCPT LSAGVV DDIT M KKLKHNANERDRRRKINSLY SLRCLLPPTDSM+
Subjt:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMI

XP_004144366.2 transcription factor bHLH101 [Cucumis sativus]1.8e-31100Show/hide
Query:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSM
        MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSM
Subjt:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSM

XP_008455701.1 PREDICTED: transcription factor bHLH101-like [Cucumis melo]1.3e-2691.55Show/hide
Query:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSM
        MEPF+QFSSLQPSQQVKLESCPT LSAGVV DDIT M KKLKHNANERDRRRKINSLY SLRCLLPPTDSM
Subjt:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSM

XP_022966445.1 transcription factor bHLH101-like [Cucurbita maxima]3.1e-1251.65Show/hide
Query:  EPFFQFSSLQPSQQVKLESCPTPLS--------AGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD---SMINHCPVLKAI
        E F QFSS QPS  VK+ESC  P +         G  +DD   +AKKLKHNA+ERDRR+K+NSLY SLRCLLP T+   +M N   + +A+
Subjt:  EPFFQFSSLQPSQQVKLESCPTPLS--------AGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD---SMINHCPVLKAI

XP_038882377.1 transcription factor bHLH101-like [Benincasa hispida]2.5e-1460.49Show/hide
Query:  MEPFFQFSSLQPSQQVKLESCPTPLS----------AGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSM
        +EPF QFSS Q SQ VKLE+C  P +           G V  D+T +AKKLKHNA+ERDRRRKINSLY SLRCLLP T+ M
Subjt:  MEPFFQFSSLQPSQQVKLESCPTPLS----------AGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSM

TrEMBL top hitse value%identityAlignment
A0A059D1N4 BHLH domain-containing protein2.1e-0650.82Show/hide
Query:  PSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMI
        PS   +    P  +  GVV D+   M KKL HNA+ERDRR+K+NSLY +LR LLP  D M+
Subjt:  PSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMI

A0A1S3C1M0 transcription factor bHLH101-like6.3e-2791.55Show/hide
Query:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSM
        MEPF+QFSSLQPSQQVKLESCPT LSAGVV DDIT M KKLKHNANERDRRRKINSLY SLRCLLPPTDSM
Subjt:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSM

A0A5A7SIL4 Transcription factor bHLH101-like2.8e-2790.28Show/hide
Query:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMI
        MEPF+QFSSLQPSQQVKLESCPT LSAGVV DDIT M KKLKHNANERDRRRKINSLY SLRCLLPPTDSM+
Subjt:  MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMI

A0A6J1EBF8 transcription factor bHLH101-like5.7e-1250.55Show/hide
Query:  EPFFQFSSLQPSQQVKLESCPTPLS--------AGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD---SMINHCPVLKAI
        E F QFSS +PS  VK+ESC  P +         G   DD   +AKKLKHNA+ERDRR+K+NSLY SLRCLLP T+   +M N   + +A+
Subjt:  EPFFQFSSLQPSQQVKLESCPTPLS--------AGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD---SMINHCPVLKAI

A0A6J1HRN3 transcription factor bHLH101-like1.5e-1251.65Show/hide
Query:  EPFFQFSSLQPSQQVKLESCPTPLS--------AGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD---SMINHCPVLKAI
        E F QFSS QPS  VK+ESC  P +         G  +DD   +AKKLKHNA+ERDRR+K+NSLY SLRCLLP T+   +M N   + +A+
Subjt:  EPFFQFSSLQPSQQVKLESCPTPLS--------AGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD---SMINHCPVLKAI

SwissProt top hitse value%identityAlignment
A2WZ60 Protein IRON-RELATED TRANSCRIPTION FACTOR 25.5e-0464.52Show/hide
Query:  KKLKHNANERDRRRKINSLYCSLRCLLPPTD
        +KL HNA ERDRR+++N LY SLR LLP  D
Subjt:  KKLKHNANERDRRRKINSLYCSLRCLLPPTD

Q9FYE6 Transcription factor bHLH1011.3e-0569.7Show/hide
Query:  MAKKLKHNANERDRRRKINSLYCSLRCLLPPTD
        + KKL HNA+ERDRRRK+N+LY SLR LLP +D
Subjt:  MAKKLKHNANERDRRRKINSLYCSLRCLLPPTD

Q9M1K0 Transcription factor ORG36.5e-0560.98Show/hide
Query:  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLP
        S G   D+   + KKL HNA+ERDRRRKINSL+ SLR  LP
Subjt:  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLP

Q9M1K1 Transcription factor ORG26.5e-0554.55Show/hide
Query:  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD
        S G   D+   + KKL HNA+ERDRR+KIN+L+ SLR  LP +D
Subjt:  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD

Q9ZVB5 Transcription factor bHLH1001.5e-0464.52Show/hide
Query:  KKLKHNANERDRRRKINSLYCSLRCLLPPTD
        KKL HNA+ER+RR+KIN+++ SLR  LPPT+
Subjt:  KKLKHNANERDRRRKINSLYCSLRCLLPPTD

Arabidopsis top hitse value%identityAlignment
AT2G41240.1 basic helix-loop-helix protein 1001.0e-0564.52Show/hide
Query:  KKLKHNANERDRRRKINSLYCSLRCLLPPTD
        KKL HNA+ER+RR+KIN+++ SLR  LPPT+
Subjt:  KKLKHNANERDRRRKINSLYCSLRCLLPPTD

AT2G41240.2 basic helix-loop-helix protein 1001.0e-0564.52Show/hide
Query:  KKLKHNANERDRRRKINSLYCSLRCLLPPTD
        KKL HNA+ER+RR+KIN+++ SLR  LPPT+
Subjt:  KKLKHNANERDRRRKINSLYCSLRCLLPPTD

AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.6e-0654.55Show/hide
Query:  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD
        S G   D+   + KKL HNA+ERDRR+KIN+L+ SLR  LP +D
Subjt:  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTD

AT3G56980.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.6e-0660.98Show/hide
Query:  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLP
        S G   D+   + KKL HNA+ERDRRRKINSL+ SLR  LP
Subjt:  SAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLP

AT5G04150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.3e-0769.7Show/hide
Query:  MAKKLKHNANERDRRRKINSLYCSLRCLLPPTD
        + KKL HNA+ERDRRRK+N+LY SLR LLP +D
Subjt:  MAKKLKHNANERDRRRKINSLYCSLRCLLPPTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCGTTCTTTCAGTTCTCATCATTGCAGCCATCTCAACAGGTCAAGCTAGAGAGCTGTCCTACCCCATTATCGGCTGGTGTCGTTGCTGACGATATCACTGACAT
GGCTAAGAAACTTAAACACAATGCTAACGAGCGCGACCGTCGAAGAAAGATCAACTCGCTCTATTGTTCTCTCCGTTGCTTGCTCCCTCCTACAGATTCAATGATCAACC
ACTGTCCTGTCCTGAAAGCAATTACGACAAACCGAGGTGTCAATCCTGATGTCGGTTGTTCCTCAAGGTTAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCGTTCTTTCAGTTCTCATCATTGCAGCCATCTCAACAGGTCAAGCTAGAGAGCTGTCCTACCCCATTATCGGCTGGTGTCGTTGCTGACGATATCACTGACAT
GGCTAAGAAACTTAAACACAATGCTAACGAGCGCGACCGTCGAAGAAAGATCAACTCGCTCTATTGTTCTCTCCGTTGCTTGCTCCCTCCTACAGATTCAATGATCAACC
ACTGTCCTGTCCTGAAAGCAATTACGACAAACCGAGGTGTCAATCCTGATGTCGGTTGTTCCTCAAGGTTAACATAG
Protein sequenceShow/hide protein sequence
MEPFFQFSSLQPSQQVKLESCPTPLSAGVVADDITDMAKKLKHNANERDRRRKINSLYCSLRCLLPPTDSMINHCPVLKAITTNRGVNPDVGCSSRLT