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CSPI04G19410 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G19410
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranslation factor GUF1 homolog, chloroplastic
Genome locationChr4:17188164..17194451
RNA-Seq ExpressionCSPI04G19410
SyntenyCSPI04G19410
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0045727 - positive regulation of translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR000795 - Translational (tr)-type GTP-binding domain
IPR006297 - Elongation factor 4
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449438.1 PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis melo]5.3e-31100Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

XP_011653860.1 translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis sativus]5.3e-31100Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

XP_031740276.1 translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis sativus]5.3e-31100Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

XP_031740277.1 translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis sativus]5.3e-31100Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

XP_031740278.1 translation factor GUF1 homolog, chloroplastic isoform X4 [Cucumis sativus]5.3e-31100Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

TrEMBL top hitse value%identityAlignment
A0A0A0L295 Tr-type G domain-containing protein5.7e-3198.61Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIP+
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

A0A1S3BMN9 Translation factor GUF1 homolog, chloroplastic2.6e-31100Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

A0A2P5BIW9 Translation factor GUF1 homolog, chloroplastic2.2e-3097.22Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYM+KNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

A0A6J1DVN5 Translation factor GUF1 homolog, chloroplastic7.5e-3198.61Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

A0A6J1HRW4 Translation factor GUF1 homolog, chloroplastic7.5e-3198.61Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

SwissProt top hitse value%identityAlignment
A5B4D2 Translation factor GUF1 homolog, chloroplastic1.9e-3193.06Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRY+++NE YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

B8AI54 Translation factor GUF1 homolog, chloroplastic1.0e-2990.28Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRY+  +E YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL+N+LEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

B9GHA6 Translation factor GUF1 homolog, chloroplastic5.0e-3294.44Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRY+Y+NE YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

B9RHQ5 Translation factor GUF1 homolog, chloroplastic1.9e-3193.06Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRY+Y+N+ YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

Q9FNM5 Translation factor GUF1 homolog, chloroplastic3.6e-3090.28Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRY+Y++  +CLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

Arabidopsis top hitse value%identityAlignment
AT1G06220.1 Ribosomal protein S5/Elongation factor G/III/V family protein1.4e-0841.27Show/hide
Query:  KNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        ++++Y  N++DTPGHV+FS E++ SL   +GA+L+VDA++GV   T   +  A+ ++L I+ V
Subjt:  KNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

AT1G06220.2 Ribosomal protein S5/Elongation factor G/III/V family protein1.4e-0841.27Show/hide
Query:  KNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        ++++Y  N++DTPGHV+FS E++ SL   +GA+L+VDA++GV   T   +  A+ ++L I+ V
Subjt:  KNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein1.2e-0759.52Show/hide
Query:  YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQT
        Y +NLID+PGHVDFS EV+ +L   +GAL+VVD  +GV  QT
Subjt:  YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQT

AT5G08650.1 Small GTP-binding protein2.5e-3190.28Show/hide
Query:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        QAARMRY+Y++  +CLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPV
Subjt:  QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV

AT5G39900.1 Small GTP-binding protein1.4e-2168.83Show/hide
Query:  QAARMRYMYKNE-----AYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV
        Q A M Y  K E      Y LNLIDTPGHVDFSYEVSRSL+AC+GALLVVDA+QGV+AQT+AN YLA + NL I+PV
Subjt:  QAARMRYMYKNE-----AYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGCAGCTCGAATGCGCTACATGTATAAGAATGAAGCATACTGCTTGAATTTGATTGATACACCTGGCCATGTTGACTTCTCTTATGAGGTTTCTCGATCTCTTGCTGC
CTGTGAGGGTGCTCTCCTTGTTGTAGATGCTTCACAGGGCGTGGAGGCACAAACGTTGGCAAATGTCTATTTGGCTCTTGATAATAACTTAGAAATTATCCCCGTAAGTT
TCATCATTATACTGCTC
mRNA sequenceShow/hide mRNA sequence
CAGGCAGCTCGAATGCGCTACATGTATAAGAATGAAGCATACTGCTTGAATTTGATTGATACACCTGGCCATGTTGACTTCTCTTATGAGGTTTCTCGATCTCTTGCTGC
CTGTGAGGGTGCTCTCCTTGTTGTAGATGCTTCACAGGGCGTGGAGGCACAAACGTTGGCAAATGTCTATTTGGCTCTTGATAATAACTTAGAAATTATCCCCGTAAGTT
TCATCATTATACTGCTC
Protein sequenceShow/hide protein sequence
QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVSFIIILL