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CSPI04G19420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G19420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranslation factor GUF1-like protein
Genome locationChr4:17200231..17200774
RNA-Seq ExpressionCSPI04G19420
SyntenyCSPI04G19420
Gene Ontology termsGO:0045727 - positive regulation of translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR000795 - Translational (tr)-type GTP-binding domain
IPR006297 - Elongation factor 4
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449438.1 PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis melo]5.1e-6996.43Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
        MA +LS APLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSL+TFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQ+RLLKVPISHIRNFSIIAHIDHGK
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK

Query:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

XP_011653860.1 translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis sativus]1.4e-71100Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
        MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK

Query:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

XP_031740276.1 translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis sativus]1.4e-71100Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
        MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK

Query:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

XP_031740277.1 translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis sativus]1.4e-71100Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
        MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK

Query:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

XP_031740278.1 translation factor GUF1 homolog, chloroplastic isoform X4 [Cucumis sativus]1.4e-71100Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
        MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK

Query:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

TrEMBL top hitse value%identityAlignment
A0A0A0L295 Tr-type G domain-containing protein7.0e-72100Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
        MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK

Query:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

A0A1S3BMN9 Translation factor GUF1 homolog, chloroplastic2.5e-6996.43Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
        MA +LS APLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSL+TFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQ+RLLKVPISHIRNFSIIAHIDHGK
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK

Query:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

A0A5D3DUS3 Translation factor GUF1-like protein2.5e-6996.43Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK
        MA +LS APLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSL+TFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQ+RLLKVPISHIRNFSIIAHIDHGK
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGK

Query:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  STLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

A0A6J1EAZ6 Translation factor GUF1 homolog, chloroplastic3.3e-5380.42Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLS---LTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHID
        MA ELS APLLSTCTQH R  QSR +  FH P+LP+PLS    T+   SSSTAT+RGKVLCQTAG H FDA+ A EAGQ+RLLKVPISHIRNF IIAHID
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLS---LTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHID

Query:  HGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        HGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  HGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

A0A6J1HRW4 Translation factor GUF1 homolog, chloroplastic3.3e-5380.42Show/hide
Query:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLS---LTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHID
        MA E S APLLSTCTQH R  QSR +  FH P+LP+PLS    T+   SSST TTRGKVLCQTAG H FDA+ A EAGQNRLLKVPISHIRNF IIAHID
Subjt:  MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLS---LTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHID

Query:  HGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        HGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
Subjt:  HGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

SwissProt top hitse value%identityAlignment
A5B4D2 Translation factor GUF1 homolog, chloroplastic2.4e-2963.2Show/hide
Query:  HFHFPSLPIPLSLTTFPFSSSTATT--------RGKVLCQ-TAGAHF---FDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQ
        H H  S P   S    PFS   +TT        R  V+ Q TAG       D   A  +GQ+RLLKVPIS+IRNF IIAHIDHGKSTLADKLLQMTGTVQ
Subjt:  HFHFPSLPIPLSLTTFPFSSSTATT--------RGKVLCQ-TAGAHF---FDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQ

Query:  TREMKDQFLDNMDLERERGITIKLQ
         REMK+QFLDNMDLERERGITIKLQ
Subjt:  TREMKDQFLDNMDLERERGITIKLQ

B9F2U5 Translation factor GUF1 homolog, chloroplastic3.2e-2966.06Show/hide
Query:  PSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLER
        P+ P+P S    P + S A  RG+V+C  A A      +  +AGQ+RL KVP+S+IRNFSIIAHIDHGKSTLADKLL++TGTVQ REMK QFLDNMDLER
Subjt:  PSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLER

Query:  ERGITIKLQ
        ERGITIKLQ
Subjt:  ERGITIKLQ

B9GHA6 Translation factor GUF1 homolog, chloroplastic2.1e-2875.28Show/hide
Query:  TRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        TR  + CQT       A  A  AGQ+RL KVPI +IRNF IIAHIDHGKSTLADKLLQMTGTVQ REMK+QFLDNMDLERERGITIKLQ
Subjt:  TRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

B9RHQ5 Translation factor GUF1 homolog, chloroplastic2.9e-3056.38Show/hide
Query:  MAVEL-SSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTA-TTRGKVLCQTAG-------AHFFDAQNAVEAGQNRLLKVPISHIRNFS
        MA +L SS+ LL +      PF   TN         + LS T   ++S  A  +R ++LCQT G       +   D Q A + GQ+RL KVPIS+IRNF 
Subjt:  MAVEL-SSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTA-TTRGKVLCQTAG-------AHFFDAQNAVEAGQNRLLKVPISHIRNFS

Query:  IIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        IIAHIDHGKSTLADKLLQ+TGTVQ REMK+QFLDNMDLERERGITIKLQ
Subjt:  IIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

Q9FNM5 Translation factor GUF1 homolog, chloroplastic3.5e-2869.89Show/hide
Query:  KVLCQT-------AGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        ++LCQ        +G     ++ A  +GQ+RLLKVPIS+IRNFSIIAHIDHGKSTLADKLLQ+TGTVQ R+MK+QFLDNMDLERERGITIKLQ
Subjt:  KVLCQT-------AGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

Arabidopsis top hitse value%identityAlignment
AT2G31060.2 elongation factor family protein4.1e-0847.37Show/hide
Query:  SHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQV
        + +RN ++IAH+DHGK+TL D+LL+  G     E   + +D+++LERERGITI  +V
Subjt:  SHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQV

AT5G08650.1 Small GTP-binding protein2.5e-2969.89Show/hide
Query:  KVLCQT-------AGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        ++LCQ        +G     ++ A  +GQ+RLLKVPIS+IRNFSIIAHIDHGKSTLADKLLQ+TGTVQ R+MK+QFLDNMDLERERGITIKLQ
Subjt:  KVLCQT-------AGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ

AT5G13650.1 elongation factor family protein8.3e-0947.17Show/hide
Query:  HIRNFSIIAHIDHGKSTLADKLLQMTGTVQTRE-MKDQFLDNMDLERERGITI
        ++RN +I+AH+DHGK+TL D +L+     +  + M+++ +D+ DLERERGITI
Subjt:  HIRNFSIIAHIDHGKSTLADKLLQMTGTVQTRE-MKDQFLDNMDLERERGITI

AT5G13650.2 elongation factor family protein8.3e-0947.17Show/hide
Query:  HIRNFSIIAHIDHGKSTLADKLLQMTGTVQTRE-MKDQFLDNMDLERERGITI
        ++RN +I+AH+DHGK+TL D +L+     +  + M+++ +D+ DLERERGITI
Subjt:  HIRNFSIIAHIDHGKSTLADKLLQMTGTVQTRE-MKDQFLDNMDLERERGITI

AT5G39900.1 Small GTP-binding protein3.2e-1661.29Show/hide
Query:  LLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ
        L K P   IRNFSIIAHIDHGKSTLAD+L+++TGT++    + Q+LD + +ERERGIT+K Q
Subjt:  LLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTAGAGCTTTCTTCCGCGCCTCTCTTATCCACATGCACTCAACATCTTCGTCCTTTCCAATCAAGAACAAACATCCATTTCCATTTCCCTTCACTTCCAATTCC
TCTATCCCTCACCACTTTCCCTTTCTCTTCTTCAACTGCCACAACCAGAGGCAAGGTCCTCTGTCAGACTGCTGGAGCGCATTTCTTCGATGCTCAAAACGCTGTTGAAG
CAGGTCAAAATCGACTGCTGAAGGTTCCTATATCGCACATCAGAAACTTCAGCATTATTGCGCACATTGATCATGGTAAATCAACTTTGGCCGATAAATTGCTTCAGATG
ACTGGTACCGTTCAGACTCGAGAAATGAAGGATCAGTTTCTTGATAACATGGATTTGGAGAGAGAAAGAGGCATCACAATTAAATTACAGGTC
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTAGAGCTTTCTTCCGCGCCTCTCTTATCCACATGCACTCAACATCTTCGTCCTTTCCAATCAAGAACAAACATCCATTTCCATTTCCCTTCACTTCCAATTCC
TCTATCCCTCACCACTTTCCCTTTCTCTTCTTCAACTGCCACAACCAGAGGCAAGGTCCTCTGTCAGACTGCTGGAGCGCATTTCTTCGATGCTCAAAACGCTGTTGAAG
CAGGTCAAAATCGACTGCTGAAGGTTCCTATATCGCACATCAGAAACTTCAGCATTATTGCGCACATTGATCATGGTAAATCAACTTTGGCCGATAAATTGCTTCAGATG
ACTGGTACCGTTCAGACTCGAGAAATGAAGGATCAGTTTCTTGATAACATGGATTTGGAGAGAGAAAGAGGCATCACAATTAAATTACAGGTC
Protein sequenceShow/hide protein sequence
MAVELSSAPLLSTCTQHLRPFQSRTNIHFHFPSLPIPLSLTTFPFSSSTATTRGKVLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQM
TGTVQTREMKDQFLDNMDLERERGITIKLQV