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CSPI04G19430 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G19430
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCACTA en-spm transposon protein
Genome locationChr4:17205017..17205684
RNA-Seq ExpressionCSPI04G19430
SyntenyCSPI04G19430
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049832.1 uncharacterized protein E6C27_scaffold1591G00280 [Cucumis melo var. makuwa]8.8e-2166.22Show/hide
Query:  ALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVD
        ALK   VP EYI+V+KG LR+WFMLDF D  LT+FVE QML++WKEF+ DNHRHFKQ+N+ +EA ANPPPR+++
Subjt:  ALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVD

KAA0054714.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]8.8e-2152.46Show/hide
Query:  DYLDN--VGGSSSAWVTLQETSALLELGVGKVHTVKLEDPHFNPPMRGQALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDN
        D LDN   GGSSS      E+   L   +   H+ K        P+R   LK A V REYIEVVKG L+++F+LDF D  + +FVEHQML  +KEFR D 
Subjt:  DYLDN--VGGSSSAWVTLQETSALLELGVGKVHTVKLEDPHFNPPMRGQALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDN

Query:  HRHFKQYNDPEEARANPPPRLV
        HRHFK+Y+DPEEARANPP  LV
Subjt:  HRHFKQYNDPEEARANPPPRLV

KAA0054888.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.7e-2045.58Show/hide
Query:  MSFPSNIHEAHVYLNL-DYLDNVGGSSSAWVTL---QETSALLELGVGKVHTVKLEDPHFNPPMRG----QALKLAHVPREYIEVVKGGLRQWFMLDFED
        MSFPS  HE  +YL L D  +N GG SS   TL   Q T +     +     ++LE    +   +      ALK A V  EYI++VKG L+        D
Subjt:  MSFPSNIHEAHVYLNL-DYLDNVGGSSSAWVTL---QETSALLELGVGKVHTVKLEDPHFNPPMRG----QALKLAHVPREYIEVVKGGLRQWFMLDFED

Query:  PTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVDHV
          LT FVEHQML++WKE + DNHRHFKQ+N+ EEARANPP RL++ V
Subjt:  PTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVDHV

TYK11015.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.7e-2045.58Show/hide
Query:  MSFPSNIHEAHVYLNL-DYLDNVGGSSSAWVTL---QETSALLELGVGKVHTVKLEDPHFNPPMRG----QALKLAHVPREYIEVVKGGLRQWFMLDFED
        MSFPS  HE  +YL L D  +N GG SS   TL   Q T +     +     ++LE    +   +      ALK A V  EYI++VKG L+        D
Subjt:  MSFPSNIHEAHVYLNL-DYLDNVGGSSSAWVTL---QETSALLELGVGKVHTVKLEDPHFNPPMRG----QALKLAHVPREYIEVVKGGLRQWFMLDFED

Query:  PTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVDHV
          LT FVEHQML++WKE + DNHRHFKQ+N+ EEARANPP RL++ V
Subjt:  PTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVDHV

TYK22325.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.8e-1966.22Show/hide
Query:  QALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLV
        + LK A V REYIEVVKGGL+++F+LDF D  + +FVEHQM+  +KEFR D HRHFK+Y+DPEEARANPP  LV
Subjt:  QALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLV

TrEMBL top hitse value%identityAlignment
A0A5A7U212 RNase H domain-containing protein4.3e-2166.22Show/hide
Query:  ALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVD
        ALK   VP EYI+V+KG LR+WFMLDF D  LT+FVE QML++WKEF+ DNHRHFKQ+N+ +EA ANPPPR+++
Subjt:  ALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVD

A0A5A7UHT7 CACTA en-spm transposon protein4.3e-2152.46Show/hide
Query:  DYLDN--VGGSSSAWVTLQETSALLELGVGKVHTVKLEDPHFNPPMRGQALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDN
        D LDN   GGSSS      E+   L   +   H+ K        P+R   LK A V REYIEVVKG L+++F+LDF D  + +FVEHQML  +KEFR D 
Subjt:  DYLDN--VGGSSSAWVTLQETSALLELGVGKVHTVKLEDPHFNPPMRGQALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDN

Query:  HRHFKQYNDPEEARANPPPRLV
        HRHFK+Y+DPEEARANPP  LV
Subjt:  HRHFKQYNDPEEARANPPPRLV

A0A5A7UIU7 CACTA en-spm transposon protein2.8e-2045.58Show/hide
Query:  MSFPSNIHEAHVYLNL-DYLDNVGGSSSAWVTL---QETSALLELGVGKVHTVKLEDPHFNPPMRG----QALKLAHVPREYIEVVKGGLRQWFMLDFED
        MSFPS  HE  +YL L D  +N GG SS   TL   Q T +     +     ++LE    +   +      ALK A V  EYI++VKG L+        D
Subjt:  MSFPSNIHEAHVYLNL-DYLDNVGGSSSAWVTL---QETSALLELGVGKVHTVKLEDPHFNPPMRG----QALKLAHVPREYIEVVKGGLRQWFMLDFED

Query:  PTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVDHV
          LT FVEHQML++WKE + DNHRHFKQ+N+ EEARANPP RL++ V
Subjt:  PTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVDHV

A0A5D3CHK6 CACTA en-spm transposon protein2.8e-2045.58Show/hide
Query:  MSFPSNIHEAHVYLNL-DYLDNVGGSSSAWVTL---QETSALLELGVGKVHTVKLEDPHFNPPMRG----QALKLAHVPREYIEVVKGGLRQWFMLDFED
        MSFPS  HE  +YL L D  +N GG SS   TL   Q T +     +     ++LE    +   +      ALK A V  EYI++VKG L+        D
Subjt:  MSFPSNIHEAHVYLNL-DYLDNVGGSSSAWVTL---QETSALLELGVGKVHTVKLEDPHFNPPMRG----QALKLAHVPREYIEVVKGGLRQWFMLDFED

Query:  PTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVDHV
          LT FVEHQML++WKE + DNHRHFKQ+N+ EEARANPP RL++ V
Subjt:  PTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLVDHV

A0A5D3DFJ8 CACTA en-spm transposon protein1.4e-1966.22Show/hide
Query:  QALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLV
        + LK A V REYIEVVKGGL+++F+LDF D  + +FVEHQM+  +KEFR D HRHFK+Y+DPEEARANPP  LV
Subjt:  QALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEFREDNHRHFKQYNDPEEARANPPPRLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTTCCGAGCAATATTCATGAGGCACATGTGTACCTGAACTTGGACTATTTAGATAATGTTGGAGGATCGTCTTCGGCGTGGGTGACACTTCAGGAGACGTCGGC
ACTCCTGGAACTTGGAGTTGGAAAGGTACATACTGTGAAATTGGAAGATCCTCATTTCAATCCCCCCATGAGGGGACAAGCCCTAAAGTTGGCTCATGTACCTCGAGAGT
ACATCGAGGTTGTCAAGGGTGGCCTACGGCAATGGTTCATGCTAGATTTCGAAGATCCAACACTTACTCAGTTTGTTGAGCATCAAATGCTCAACGTGTGGAAGGAATTT
AGGGAAGACAACCACCGACATTTCAAGCAATACAACGACCCTGAAGAAGCACGTGCAAACCCACCACCTAGATTGGTCGATCATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTTCCGAGCAATATTCATGAGGCACATGTGTACCTGAACTTGGACTATTTAGATAATGTTGGAGGATCGTCTTCGGCGTGGGTGACACTTCAGGAGACGTCGGC
ACTCCTGGAACTTGGAGTTGGAAAGGTACATACTGTGAAATTGGAAGATCCTCATTTCAATCCCCCCATGAGGGGACAAGCCCTAAAGTTGGCTCATGTACCTCGAGAGT
ACATCGAGGTTGTCAAGGGTGGCCTACGGCAATGGTTCATGCTAGATTTCGAAGATCCAACACTTACTCAGTTTGTTGAGCATCAAATGCTCAACGTGTGGAAGGAATTT
AGGGAAGACAACCACCGACATTTCAAGCAATACAACGACCCTGAAGAAGCACGTGCAAACCCACCACCTAGATTGGTCGATCATGTGTAA
Protein sequenceShow/hide protein sequence
MSFPSNIHEAHVYLNLDYLDNVGGSSSAWVTLQETSALLELGVGKVHTVKLEDPHFNPPMRGQALKLAHVPREYIEVVKGGLRQWFMLDFEDPTLTQFVEHQMLNVWKEF
REDNHRHFKQYNDPEEARANPPPRLVDHV