CuGenDBv2

Gene ID	CSPI04G19530
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA-directed DNA polymerase
Genome location	Chr4:17314583..17316964
RNA-Seq Expression	CSPI04G19530
Synteny	CSPI04G19530
Gene Ontology terms	GO:0006261 - DNA-dependent DNA replication (biological process) GO:0071897 - DNA biosynthetic process (biological process) GO:0003677 - DNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR002298 - DNA polymerase A

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144345.1 uncharacterized protein LOC101222649 isoform X1 [Cucumis sativus]

2.2e-36

98.75

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        +MLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

XP_008449676.1 PREDICTED: DNA polymerase I [Cucumis melo]

2.2e-36

98.75

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        +MLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

XP_011653865.1 uncharacterized protein LOC101222649 isoform X2 [Cucumis sativus]

2.2e-36

98.75

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        +MLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

XP_038899892.1 DNA polymerase I isoform X2 [Benincasa hispida]

3.2e-32

91.25

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        +MLVTNAEQAILSKDLA LRSDLP YMVPF+TRDLLFKKPEDNGEKFTSLLTAIGAYAE FSADPIIRRVL LWKKLD+N
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

XP_038899895.1 DNA polymerase I isoform X4 [Benincasa hispida]

3.2e-32

91.25

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        +MLVTNAEQAILSKDLA LRSDLP YMVPF+TRDLLFKKPEDNGEKFTSLLTAIGAYAE FSADPIIRRVL LWKKLD+N
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3M4 Uncharacterized protein

5.2e-44

98.89

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Query:  MDDSGCQWRTEMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        M+DSGCQWRTEMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
Subjt:  MDDSGCQWRTEMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

A0A1S3BMJ7 DNA-directed DNA polymerase

1.1e-36

98.75

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        +MLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

A0A6J1D5H7 DNA-directed DNA polymerase

2.1e-32

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        +MLVTNA QAILSK+LA LRSDLP YMVPFTTRDLLFKKPEDNGEKFTSL+TAIGAYAE FSADPIIRRVLYLWKKL+KN
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

A0A6J1D7Q6 DNA-directed DNA polymerase

2.1e-32

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        +MLVTNA QAILSK+LA LRSDLP YMVPFTTRDLLFKKPEDNGEKFTSL+TAIGAYAE FSADPIIRRVLYLWKKL+KN
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

A0A6J1D847 uncharacterized protein LOC111017796 isoform X2

2.1e-32

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN
        +MLVTNA QAILSK+LA LRSDLP YMVPFTTRDLLFKKPEDNGEKFTSL+TAIGAYAE FSADPIIRRVLYLWKKL+KN
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G52050.1 5'-3' exonuclease family protein

1.8e-25

69.23

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLD
        E L+ +A+QAILSK LA LRSDLP Y+VPF T+DL FKKPEDNGEK +SLL AI  YAE FSADP+IRR   LW+KL+
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLD

AT3G52050.2 5'-3' exonuclease family protein

1.8e-25

69.23

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLD
        E L+ +A+QAILSK LA LRSDLP Y+VPF T+DL FKKPEDNGEK +SLL AI  YAE FSADP+IRR   LW+KL+
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLD

AT3G52050.3 5'-3' exonuclease family protein

1.8e-25

69.23

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLD
        E L+ +A+QAILSK LA LRSDLP Y+VPF T+DL FKKPEDNGEK +SLL AI  YAE FSADP+IRR   LW+KL+
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLD

AT3G52050.4 5'-3' exonuclease family protein

1.8e-25

69.23

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Query:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLD
        E L+ +A+QAILSK LA LRSDLP Y+VPF T+DL FKKPEDNGEK +SLL AI  YAE FSADP+IRR   LW+KL+
Subjt:  EMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLD

Sequences

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CDS sequence

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mRNA sequence

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ATGGACGACAGTGGCTGTCAGTGGAGGACAGAGATGTTGGTAACAAATGCTGAACAAGCTATCTTGAGCAAGGACCTGGCAACCTTGCGATCTGATCTTCCATTCTATAT
GGTACCATTTACCACCAGAGACCTTTTATTCAAGAAACCGGAGGATAATGGGGAGAAATTCACAAGCCTCTTAACTGCTATTGGTGCATATGCAGAAAGATTTTCTGCTG
ATCCAATCATTAGGAGAGTACTCTACTTATGGAAGAAGCTAGACAAAAATTAGTTATTGGTAATCAATTAATCTATGTCTCCACTTTGTTTCTTTTAAATTTGGTTTTGT
TGTGTGGTTAGAGATATAAGTAGAGCTTAGAAATCACATCATTCTTTATATATATATATGAATAACCCCTTCTCCTTGTTCTTCATGTCCTTTTAACAAAGAAAATGTGA
AACACGAGAAGTTTCAGCTTGATGAAATAACTCAACTGGAGTCTTCTCCCCTTGGATTGCTTCTTTGAACACTCCATTCATGTGAATGGTTTTTTGGAAGATGGAGGCAT
TTTGTGGTTGAAGTATATATATGTACATGTATATTAAATTTATCCCAACCCATTCACGTGAAAGATAGGTAATTTGACATTTACAATATTGAAAGATGGTTCATCTAACA
TGGATGGGTTTCAAGTATTCAGAGATAAATGTTCCTGAAAATTAATGGTTTTACATTTTTCCTCTTGATTTAGAAGATGATACATCATGGAAACGGGTTTTTGAAAATAT
AAAGGAAGTTCTAGGGAATGAGAGGGATTAATAATGATCTCTAG

Protein sequence

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MDDSGCQWRTEMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKLDKN

CSPI04G19530 (gene) of Cucumber (PI 183967) v1 genome