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CSPI04G19550 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G19550
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationChr4:17322131..17323144
RNA-Seq ExpressionCSPI04G19550
SyntenyCSPI04G19550
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032570.1 protein SAND [Cucumis melo var. makuwa]2.0e-3659.7Show/hide
Query:  LDKWRRYNLS-------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSV
        L KWR   L        +V+RSIH+S TF WH++GKE+ SLRSPWISISRQ RK++ LA+FK+G G RILFW  PW++ I L  KFPRL RIAL P GSV
Subjt:  LDKWRRYNLS-------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSV

Query:  LDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI
         ++WDSS++SWSI FR LL +EEI DFQ LL  +
Subjt:  LDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI

RVW90400.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.6e-3836.15Show/hide
Query:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP
        + E F VG++R  +  LQFADD + F    EE +  LK  LLVF   SG K+N +KS I G+N+E + +   A +L+CK    P +YLGLPLG  PK++ 
Subjt:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP

Query:  FWQPILDKIHGKLDKWRRYNLS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWV
        FW P++++I  +LD W++  LS                  +VI SI+ S +  W  N     S R PW +I+  +++      F +GDG RI FW   W 
Subjt:  FWQPILDKIHGKLDKWRRYNLS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWV

Query:  DIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI
           TL  ++PRL  +  + N    S+L +  S   SW+  FRR L D EI D ++L+  +
Subjt:  DIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI

TYK01565.1 hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa]3.0e-4060.16Show/hide
Query:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP
        ++E FV+GKD++H+PILQF D  LLFC YD  MM+NL++TL  FEWCSGQK+NW+KSA+CG+N+ +SE++S A  L  KV+ LP IYLGLPLG Y K   
Subjt:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP

Query:  FWQPILDKIHGKLDKWRRYNLSR
         WQ + DK+H KLDKW+R+N SR
Subjt:  FWQPILDKIHGKLDKWRRYNLSR

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]2.5e-5540.86Show/hide
Query:  FEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPF
        +E F+VGKD+VHI I+QF  D LLFCKY +EM+ENL +T+ +FEWCS QK+NWEKSAICG+NIE+++++S A  LNCKV+ LP +YLGLPLG YPK+  F
Subjt:  FEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPF

Query:  WQPILDKIHGKLDKWRRYNLSR------------------------------------------------------------------------------
        WQP++DK+ GKLDKWRR+NLSR                                                                              
Subjt:  WQPILDKIHGKLDKWRRYNLSR------------------------------------------------------------------------------

Query:  -------------------VIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVD
                           V++SIH    F+WH++GK +++LRS WISISR W K+++LA++KLG+GSRI F   PW D
Subjt:  -------------------VIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVD

XP_038889274.1 uncharacterized protein LOC120079176 [Benincasa hispida]5.1e-4060.32Show/hide
Query:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP
        + E FVVGKD++ I ILQFAD  LLFCKYD  M+  LK+T+  F+WCSGQK+NWEKSA+ G+N++++E+ISTA  LNCK + LPF YLGLPLG Y K   
Subjt:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP

Query:  FWQPILDKIHGKLDKWRRYNLSRVIR
        FWQP+L+    KLDKW+ +NLSR +R
Subjt:  FWQPILDKIHGKLDKWRRYNLSRVIR

TrEMBL top hitse value%identityAlignment
A0A438DVH3 Transposon TX1 uncharacterized 149 kDa protein9.7e-3735Show/hide
Query:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP
        + E F VG+++  +  LQFADD + F    EE M  LK  LLVF    G K+N +KS I  +N+E + +   A +L+CK    P +YLGLPLG  PK++ 
Subjt:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP

Query:  FWQPILDKIHGKLDKWRRYNLS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWV
        FW P++++I  +LD W++  LS                  +VI SI+ S +  W  N     S R PW +I+  +++      F +GDG RI FW   W 
Subjt:  FWQPILDKIHGKLDKWRRYNLS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWV

Query:  DIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI
            L  ++PRL  +  + N    S+L +  S   SW+  FRR L D EI D ++L+  +
Subjt:  DIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI

A0A438I181 Transposon TX1 uncharacterized 149 kDa protein1.8e-3836.15Show/hide
Query:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP
        + E F VG++R  +  LQFADD + F    EE +  LK  LLVF   SG K+N +KS I G+N+E + +   A +L+CK    P +YLGLPLG  PK++ 
Subjt:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP

Query:  FWQPILDKIHGKLDKWRRYNLS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWV
        FW P++++I  +LD W++  LS                  +VI SI+ S +  W  N     S R PW +I+  +++      F +GDG RI FW   W 
Subjt:  FWQPILDKIHGKLDKWRRYNLS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWV

Query:  DIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI
           TL  ++PRL  +  + N    S+L +  S   SW+  FRR L D EI D ++L+  +
Subjt:  DIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI

A0A5A7SP09 Vacuolar fusion protein MON1 homolog9.7e-3759.7Show/hide
Query:  LDKWRRYNLS-------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSV
        L KWR   L        +V+RSIH+S TF WH++GKE+ SLRSPWISISRQ RK++ LA+FK+G G RILFW  PW++ I L  KFPRL RIAL P GSV
Subjt:  LDKWRRYNLS-------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSV

Query:  LDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI
         ++WDSS++SWSI FR LL +EEI DFQ LL  +
Subjt:  LDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQI

A0A5D3BF26 Putative LRR receptor-like serine/threonine-protein kinase8.2e-3631.88Show/hide
Query:  MMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNLSR---------
        M+  LK+ + +FE CS QK+NWEKSA+ G++I +  ++ TA+ ++CK E+LP +YL LPLG YP+   FWQP++D+IH KLD+W+ +N+ R         
Subjt:  MMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNLSR---------

Query:  ------------------------------------------------------------------------------------VIRSIHESSTFNWHSN
                                                                                            +I SIH    F+W + 
Subjt:  ------------------------------------------------------------------------------------VIRSIHESSTFNWHSN

Query:  GKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLS
         K   SLRSPW SIS+ WR ++SLAL K                          LGRIAL P G V DHWD +T SWS+ FRR L D EI++F++ LS
Subjt:  GKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLS

A0A5D3BQV1 Reverse transcriptase domain-containing protein1.4e-4060.16Show/hide
Query:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP
        ++E FV+GKD++H+PILQF D  LLFC YD  MM+NL++TL  FEWCSGQK+NW+KSA+CG+N+ +SE++S A  L  KV+ LP IYLGLPLG Y K   
Subjt:  MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAP

Query:  FWQPILDKIHGKLDKWRRYNLSR
         WQ + DK+H KLDKW+R+N SR
Subjt:  FWQPILDKIHGKLDKWRRYNLSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCT
TAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAA
ACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCAT
GGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAG
AAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACA
TTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTC
AGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCT
TAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAA
ACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCAT
GGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAG
AAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACA
TTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTC
AGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA
Protein sequenceShow/hide protein sequence
MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIH
GKLDKWRRYNLSRVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTNSWSIYF
RRLLNDEEILDFQALLSQISSS