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CSPI04G19820 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G19820
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription initiation factor TFIID subunit 1 isoform X1
Genome locationChr4:17644990..17652345
RNA-Seq ExpressionCSPI04G19820
SyntenyCSPI04G19820
Gene Ontology termsGO:0006071 - glycerol metabolic process (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0006655 - phosphatidylglycerol biosynthetic process (biological process)
GO:0006810 - transport (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016024 - CDP-diacylglycerol biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031969 - chloroplast membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003841 - 1-acylglycerol-3-phosphate O-acyltransferase activity (molecular function)
GO:0004371 - glycerone kinase activity (molecular function)
GO:0004674 - protein serine/threonine kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036035.1 putative 3,4-dihydroxy-2-butanone kinase isoform X2 [Cucumis melo var. makuwa]4.1e-3285.9Show/hide
Query:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLS
        GRL+ISKFQAKSGWVLSCDHWPYSGGLF+IR CS KNQQGW S C+MLEKFVEKMDYVRWY GNI SFPSPQ VEK+S
Subjt:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLS

TYJ98834.1 putative 3,4-dihydroxy-2-butanone kinase isoform X1 [Cucumis melo var. makuwa]4.1e-3285.9Show/hide
Query:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLS
        GRL+ISKFQAKSGWVLSCDHWPYSGGLF+IR CS KNQQGW S C+MLEKFVEKMDYVRWY GNI SFPSPQ VEK+S
Subjt:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLS

TYJ98837.1 putative 3,4-dihydroxy-2-butanone kinase isoform X5 [Cucumis melo var. makuwa]2.2e-3033.09Show/hide
Query:  SQSKTWKLSVGKSTSPTTAFGKRKIVVSLKMWKPVEASLFLGRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVR
        SQ+ TW++SV                   + ++ ++     GRL+ISKFQAKSGW+LSCDHWPYSGGLF+IRVC  K+QQ                    
Subjt:  SQSKTWKLSVGKSTSPTTAFGKRKIVVSLKMWKPVEASLFLGRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVR

Query:  WYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPPKQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQ
                                                                                                            
Subjt:  WYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPPKQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQ

Query:  GSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWLKIKNLPLDYWCRSTFEVIGDHFGGLIDI
                  GKWQ WGNF LK ERWD++KHS PLV KGY GWLKIKNLPLDYWCRST EVIGDHF GL DI
Subjt:  GSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWLKIKNLPLDYWCRSTFEVIGDHFGGLIDI

TYK11578.1 transcription initiation factor TFIID subunit 1 isoform X1 [Cucumis melo var. makuwa]8.8e-2738.02Show/hide
Query:  PYSG--GLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPP
        PY    G F+IRVCS+ N++GW SFC+MLEK V+ +DY  W+S N +  PS   VEK+SYV+ VKS++S                               
Subjt:  PYSG--GLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPP

Query:  KQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWLKIKNLPLD
                                         T   +DQGS+ D I  EGKW  WGNF LKFE+WD++KH+RPLVLK Y GWLK++   LD
Subjt:  KQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWLKIKNLPLD

TYK30603.1 Ulp1-like peptidase [Cucumis melo var. makuwa]2.2e-2534.65Show/hide
Query:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEV
        G  +++KF++ SGW+L C    +SG L  + V S   +QGW S          +    RW   +I+           S V   K+ +S+  +++S     
Subjt:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEV

Query:  SQDFSQKRKLLVDSHPSPPKQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYD
            ++   LL+ S  S             +   LE+ F +K  INP FD      I+ G I + +  + KW  +G F L FE+WD I HSRP  +KG+ 
Subjt:  SQDFSQKRKLLVDSHPSPPKQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYD

Query:  GWLKIKNLPLDYWCRSTFEVIGDHFGGL
        GWL IKNLPLD W R+ FEVIG HFGGL
Subjt:  GWLKIKNLPLDYWCRSTFEVIGDHFGGL

TrEMBL top hitse value%identityAlignment
A0A5A7T3H6 Putative 3,4-dihydroxy-2-butanone kinase isoform X22.0e-3285.9Show/hide
Query:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLS
        GRL+ISKFQAKSGWVLSCDHWPYSGGLF+IR CS KNQQGW S C+MLEKFVEKMDYVRWY GNI SFPSPQ VEK+S
Subjt:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLS

A0A5D3BI91 Putative 3,4-dihydroxy-2-butanone kinase isoform X51.1e-3033.09Show/hide
Query:  SQSKTWKLSVGKSTSPTTAFGKRKIVVSLKMWKPVEASLFLGRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVR
        SQ+ TW++SV                   + ++ ++     GRL+ISKFQAKSGW+LSCDHWPYSGGLF+IRVC  K+QQ                    
Subjt:  SQSKTWKLSVGKSTSPTTAFGKRKIVVSLKMWKPVEASLFLGRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVR

Query:  WYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPPKQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQ
                                                                                                            
Subjt:  WYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPPKQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQ

Query:  GSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWLKIKNLPLDYWCRSTFEVIGDHFGGLIDI
                  GKWQ WGNF LK ERWD++KHS PLV KGY GWLKIKNLPLDYWCRST EVIGDHF GL DI
Subjt:  GSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWLKIKNLPLDYWCRSTFEVIGDHFGGLIDI

A0A5D3BIE8 Putative 3,4-dihydroxy-2-butanone kinase isoform X12.0e-3285.9Show/hide
Query:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLS
        GRL+ISKFQAKSGWVLSCDHWPYSGGLF+IR CS KNQQGW S C+MLEKFVEKMDYVRWY GNI SFPSPQ VEK+S
Subjt:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLS

A0A5D3CK64 Transcription initiation factor TFIID subunit 1 isoform X14.2e-2738.02Show/hide
Query:  PYSG--GLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPP
        PY    G F+IRVCS+ N++GW SFC+MLEK V+ +DY  W+S N +  PS   VEK+SYV+ VKS++S                               
Subjt:  PYSG--GLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPP

Query:  KQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWLKIKNLPLD
                                         T   +DQGS+ D I  EGKW  WGNF LKFE+WD++KH+RPLVLK Y GWLK++   LD
Subjt:  KQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWLKIKNLPLD

A0A5D3E3A5 Ulp1-like peptidase1.0e-2534.65Show/hide
Query:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEV
        G  +++KF++ SGW+L C    +SG L  + V S   +QGW S          +    RW   +I+           S V   K+ +S+  +++S     
Subjt:  GRLKISKFQAKSGWVLSCDHWPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEV

Query:  SQDFSQKRKLLVDSHPSPPKQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYD
            ++   LL+ S  S             +   LE+ F +K  INP FD      I+ G I + +  + KW  +G F L FE+WD I HSRP  +KG+ 
Subjt:  SQDFSQKRKLLVDSHPSPPKQKQWLIKNHELAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYD

Query:  GWLKIKNLPLDYWCRSTFEVIGDHFGGL
        GWL IKNLPLD W R+ FEVIG HFGGL
Subjt:  GWLKIKNLPLDYWCRSTFEVIGDHFGGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTGTTTCTCTCTATCGCCATGCTTTTTCGCTTCCTCTTCATCGCTCCGGTTGTCAAGAACTTGGGCTTTTCAGTACTTCATCTTCTCTGCTGATGAATGGGTT
TAGGAGTCTTCAATATAGTTCGTCTCTACATCAACAAGCAAATTTGGGAAATGCTGAACAGAAATTCAACAAGACTGAAAATAAAACTACCCAGCCACCAGATACTGAAT
ACTCTGCCTTCCCTGCTCTCCAGGAAACTAGCAGCCCTCGATACCAGAACAAAATAACCCCCCTTCTCTTCCCTTCTTCCTATCCTCTAAACAATCCTTCTCTCCCCAAA
GAAGCATCTCATATAAGCTTCCACACCTCTATTGACCACCTCCGTTTGTCCATCCGATTGGGGGTGGATAGCTGTGTAACTATCTCTTTAACAAAAACCTCAGCAACAGC
CTTTGCACCGGTTTCTTCATCAGTCTTTTTTGACAAGTCTCAAAGCAAAACATGGAAGTTGTCAGTTGGGAAATCGACCAGTCCCACTACTGCATTTGGAAAGAGGAAGA
TAGTTGTTTCATTGAAGATGTGGAAGCCTGTAGAAGCATCTCTATTTCTAGGAAGATTGAAAATTTCAAAGTTTCAAGCAAAGTCCGGATGGGTCCTAAGCTGCGATCAT
TGGCCATATTCAGGGGGTCTTTTCAGTATTAGAGTTTGCTCAGAAAAAAATCAGCAAGGATGGAAGTCGTTTTGCAAGATGCTGGAAAAATTTGTAGAAAAAATGGACTA
TGTTAGATGGTACTCTGGTAATATATCCAGTTTTCCTTCTCCGCAAATGGTAGAAAAGTTGAGTTATGTTGATAAGGTTAAGTCCAGTAGCTCTAAACTCCCAGTTATAA
GGTCTGAAAGACTGGAAGTCAGCCAAGATTTTAGTCAAAAAAGGAAGTTACTAGTGGACAGTCATCCTTCCCCTCCAAAACAGAAGCAGTGGTTGATCAAGAACCATGAA
CTTGCTAAGAGGCTGGAAGAATTTTTTGGAATGAAAACTGTAATAAATCCTCTATTTGATGAGAACACCCTCATTGGTATTGATCAAGGATCAATTATTGACTTTATCCG
TGAGGAAGGGAAATGGCAAGCTTGGGGGAATTTCCGCCTCAAATTCGAAAGATGGGACGACATCAAACACAGTCGGCCACTTGTTTTAAAAGGCTACGATGGTTGGCTCA
AAATAAAAAACCTTCCTCTGGATTATTGGTGTAGAAGCACCTTTGAGGTTATTGGGGATCACTTTGGAGGTCTTATTGACATATAG
mRNA sequenceShow/hide mRNA sequence
CAAGAGCAAAAGGAAAAGCTCTTTGCACGCTTCTCTCTCTCTTCACTTTCTGAATCTTCCGCCATTTCTCCGCATTCAATTCTCTTTGCTTCTCGTAAATAATCACTTCA
TTTCTTCCATCTCCTACTCTGTTTCTTCTTCGTCTTCTTCATTTTGTTCATGTTTTTCGTCTTTTTCTTCTCAATCATCTCTGTCCTTAACCAAATCCATCTCATTTCAA
CTTACTTTCTCCCCATAAATTCTGCCTTTCGATTTCCGTTTCCTGCTCCCTTTGACTTATCTTATGGTGATTGAACTCTTGGGTTGTTTTTCATCTTCTCTTAATCCTCA
ATTTGTCGTCAAATAGAGTTTCTCTATCAAACCATTATTCTGCTCATGCTTTGCTCCCGTTTTTCTCCATGGAAGTTGTTTCTCTCTATCGCCATGCTTTTTCGCTTCCT
CTTCATCGCTCCGGTTGTCAAGAACTTGGGCTTTTCAGTACTTCATCTTCTCTGCTGATGAATGGGTTTAGGAGTCTTCAATATAGTTCGTCTCTACATCAACAAGCAAA
TTTGGGAAATGCTGAACAGAAATTCAACAAGACTGAAAATAAAACTACCCAGCCACCAGATACTGAATACTCTGCCTTCCCTGCTCTCCAGGAAACTAGCAGCCCTCGAT
ACCAGAACAAAATAACCCCCCTTCTCTTCCCTTCTTCCTATCCTCTAAACAATCCTTCTCTCCCCAAAGAAGCATCTCATATAAGCTTCCACACCTCTATTGACCACCTC
CGTTTGTCCATCCGATTGGGGGTGGATAGCTGTGTAACTATCTCTTTAACAAAAACCTCAGCAACAGCCTTTGCACCGGTTTCTTCATCAGTCTTTTTTGACAAGTCTCA
AAGCAAAACATGGAAGTTGTCAGTTGGGAAATCGACCAGTCCCACTACTGCATTTGGAAAGAGGAAGATAGTTGTTTCATTGAAGATGTGGAAGCCTGTAGAAGCATCTC
TATTTCTAGGAAGATTGAAAATTTCAAAGTTTCAAGCAAAGTCCGGATGGGTCCTAAGCTGCGATCATTGGCCATATTCAGGGGGTCTTTTCAGTATTAGAGTTTGCTCA
GAAAAAAATCAGCAAGGATGGAAGTCGTTTTGCAAGATGCTGGAAAAATTTGTAGAAAAAATGGACTATGTTAGATGGTACTCTGGTAATATATCCAGTTTTCCTTCTCC
GCAAATGGTAGAAAAGTTGAGTTATGTTGATAAGGTTAAGTCCAGTAGCTCTAAACTCCCAGTTATAAGGTCTGAAAGACTGGAAGTCAGCCAAGATTTTAGTCAAAAAA
GGAAGTTACTAGTGGACAGTCATCCTTCCCCTCCAAAACAGAAGCAGTGGTTGATCAAGAACCATGAACTTGCTAAGAGGCTGGAAGAATTTTTTGGAATGAAAACTGTA
ATAAATCCTCTATTTGATGAGAACACCCTCATTGGTATTGATCAAGGATCAATTATTGACTTTATCCGTGAGGAAGGGAAATGGCAAGCTTGGGGGAATTTCCGCCTCAA
ATTCGAAAGATGGGACGACATCAAACACAGTCGGCCACTTGTTTTAAAAGGCTACGATGGTTGGCTCAAAATAAAAAACCTTCCTCTGGATTATTGGTGTAGAAGCACCT
TTGAGGTTATTGGGGATCACTTTGGAGGTCTTATTGACATATAG
Protein sequenceShow/hide protein sequence
MEVVSLYRHAFSLPLHRSGCQELGLFSTSSSLLMNGFRSLQYSSSLHQQANLGNAEQKFNKTENKTTQPPDTEYSAFPALQETSSPRYQNKITPLLFPSSYPLNNPSLPK
EASHISFHTSIDHLRLSIRLGVDSCVTISLTKTSATAFAPVSSSVFFDKSQSKTWKLSVGKSTSPTTAFGKRKIVVSLKMWKPVEASLFLGRLKISKFQAKSGWVLSCDH
WPYSGGLFSIRVCSEKNQQGWKSFCKMLEKFVEKMDYVRWYSGNISSFPSPQMVEKLSYVDKVKSSSSKLPVIRSERLEVSQDFSQKRKLLVDSHPSPPKQKQWLIKNHE
LAKRLEEFFGMKTVINPLFDENTLIGIDQGSIIDFIREEGKWQAWGNFRLKFERWDDIKHSRPLVLKGYDGWLKIKNLPLDYWCRSTFEVIGDHFGGLIDI