| GenBank top hits | e value | %identity | Alignment |
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| KAG6592199.1 hypothetical protein SDJN03_14545, partial [Cucurbita argyrosperma subsp. sororia] | 2.3e-76 | 92.59 | Show/hide |
Query: VVSASSVCFISLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRA
+VSAS CF+SLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR
Subjt: VVSASSVCFISLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRA
Query: DRKPLGVGRGRGRGREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
DRKP GVGRGRGRGREDGPGGRP+KGMGRGFDDGAKA++GGRGKG GGK GANRVGGRGRG
Subjt: DRKPLGVGRGRGRGREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 1.1e-75 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKA++GGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| XP_011653886.2 probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis sativus] | 1.8e-76 | 100 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| XP_022143617.1 probable U6 snRNA-associated Sm-like protein LSm4 [Momordica charantia] | 1.5e-75 | 97.99 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLG+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDG+KAS+GGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 2.6e-80 | 75.32 | Show/hide |
Query: HLSISLRHSPPLTVSLSPPA---------DAITCRSPFAPLDSSDDNHLVALRHPLPPL-ASPNLKVE-VVSASSVCFISLKMLPLSLLKTAQGHPMLVE
H+S + PPL + PA +A+ R L S+ N AL P+ A K VVSASSVCF+SLKMLPLSLLKTAQGHPMLVE
Subjt: HLSISLRHSPPLTVSLSPPA---------DAITCRSPFAPLDSSDDNHLVALRHPLPPL-ASPNLKVE-VVSASSVCFISLKMLPLSLLKTAQGHPMLVE
Query: LKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGMGRGF
LKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGRGREDGPGGRPAKGMGRGF
Subjt: LKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGMGRGF
Query: DDGAKASTGGRGKGGPGGKPGANRVGGRGRG
DD AKA++GGRGKGGPGGKPGANRVGGRGRG
Subjt: DDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0K9I4 U6 snRNA-associated Sm-like protein LSm4 | 6.1e-75 | 97.99 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GREDGPG RPAKGMGRGFDDGAKA++GGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| A0A0A0L3Q6 U6 snRNA-associated Sm-like protein LSm4 | 1.3e-122 | 97.85 | Show/hide |
Query: IVDQPPTTPSSLRHLSISLRHSPPLTVSLSPPADAITCRSPFAPLDSSDDNHLVALRHPLPPLASPNLKVEVVSASSVCFISLKMLPLSLLKTAQGHPML
I+DQPPTTPSSLRHLS+SLRHSPPLTVSLSPPADAITCRSPFAPLDSSDDNHLVALRHPLPPLASPNLKVEVVSASSVCFISLKMLPLSLLKTAQGHPML
Subjt: IVDQPPTTPSSLRHLSISLRHSPPLTVSLSPPADAITCRSPFAPLDSSDDNHLVALRHPLPPLASPNLKVEVVSASSVCFISLKMLPLSLLKTAQGHPML
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGMGR
VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPG RPAKGMGR
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGMGR
Query: GFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GFDDGAKA++GGRGKGGPGGKPGANRVGGRGRG
Subjt: GFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 5.5e-76 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKA++GGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1CRC5 U6 snRNA-associated Sm-like protein LSm4 | 7.2e-76 | 97.99 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLG+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDG+KAS+GGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 8.0e-75 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKA++GGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 1.1e-52 | 77.18 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
G +DG GA+ GRG+G GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 2.9e-58 | 82 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKP GVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: -GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GR+D GR KG+GRG DDG GRGKGGP K G R GGRGRG
Subjt: -GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 3.2e-57 | 82.12 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPLGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+P GVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPLGVGRGRG
Query: RGR-EDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
RG PGGR G+GRG DDG GGRG+GG GGK G + GGRGRG
Subjt: RGR-EDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 1.0e-39 | 64.29 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE GRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKASTGGRGKGGPGGKPG
++ GR G GRG F + G G+G P KPG
Subjt: GREDGPGGRPAKGMGRG-FDDGAKASTGGRGKGGPGGKPG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.2e-56 | 80.67 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
GRE+G G R +G GR AKA RG+G GK G GGRGRG
Subjt: GREDGPGGRPAKGMGRG-FDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 2.5e-12 | 35.51 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPLGVGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ LGVGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPLGVGR
Query: GRGRGREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGP
GRG R G+PA G GRG TGGRG P
Subjt: GRGRGREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 1.4e-10 | 32.84 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPLGVGRGRGR
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + LGVGRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGP
AKG GRG + GGRG P
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 6.4e-08 | 39.6 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGRGRGREDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGRGRGREDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 1.3e-05 | 36.04 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGR
Query: GRGREDGPGGR
GRGR G GGR
Subjt: GRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 7.7e-54 | 77.18 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
G +DG GA+ GRG+G GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKASTGGRGKGGPGGKPGANRVGGRGRG
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