; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G20010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G20010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Genome locationChr4:17954692..17960636
RNA-Seq ExpressionCSPI04G20010
SyntenyCSPI04G20010
Gene Ontology termsGO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR003173 - Transcriptional coactivator p15 (PC4), C-terminal
IPR009044 - ssDNA-binding transcriptional regulator
IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146395.1 RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis sativus]1.4e-50100Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

XP_008442140.1 PREDICTED: RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis melo]1.2e-4694.23Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSASGKRK DED VSEGDAPPSKTF+KD DD DEIVVCELSKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

XP_022932999.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita moschata]1.9e-4489.42Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRK DED V EGDAPP KTF+KDSD+TDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNEN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        S GD
Subjt:  SSGD

XP_023543027.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X2 [Cucurbita pepo subsp. pepo]5.0e-4590.38Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRK DED VSEGDAPP KTF+KDSD+TDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNEN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        S GD
Subjt:  SSGD

XP_038881105.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Benincasa hispida]1.6e-4693.27Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRK +ED  SEGDAPPSKTFKKDSDDTDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHVEEIDKAVNEN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

TrEMBL top hitse value%identityAlignment
A0A0A0L2F1 PC4 domain-containing protein6.6e-51100Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

A0A1S3B4K6 RNA polymerase II transcriptional coactivator KIWI isoform X15.8e-4794.23Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSASGKRK DED VSEGDAPPSKTF+KD DD DEIVVCELSKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X19.3e-4589.42Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRK DED V EGDAPP KTF+KDSD+TDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNEN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        S GD
Subjt:  SSGD

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X13.0e-4389.11Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRK DED  SEGDAPP KTFKKDS++TDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG SLSLDQWNVL NHVEEIDKAVNEN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1IRG1 RNA polymerase II transcriptional coactivator KIWI-like isoform X11.0e-4386.54Show/hide
Query:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKR+ DED VSEGDAPP KTF+KDSD+TDEIVVCE+SKNR+V+VRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAV+EN
Subjt:  MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        S GD
Subjt:  SSGD

SwissProt top hitse value%identityAlignment
O65154 RNA polymerase II transcriptional coactivator KIWI4.0e-2962.62Show/hide
Query:  MSASGKRKGDE----DDVSEGDAPPSKTFK--KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID
        MS+ GKRK ++    DD SE  AP  K  K   DSD +D+IVVC +SKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN L NH E+I+
Subjt:  MSASGKRKGDE----DDVSEGDAPPSKTFK--KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

O65155 RNA polymerase II transcriptional coactivator KELP6.9e-1342.11Show/hide
Query:  KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS
        K+ DD  ++++C LS  RRV ++ ++GK +V IRE+Y KDGK++P  KGISL+ +QW+    ++  I+ AV +  S
Subjt:  KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS

P11031 Activated RNA polymerase II transcriptional coactivator p151.2e-0935.71Show/hide
Query:  GDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE
        G+   +    K S  + +  + ++ K R V VR+++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L   + +ID AV +
Subjt:  GDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE

Q5ZK63 Activated RNA polymerase II transcriptional coactivator p155.5e-1038.1Show/hide
Query:  GDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE
        G++       K S + DE +  ++ K R V VR+++GK+++DIRE+++ ++G+  PG+KGISL+ +QWN L   + +ID AV +
Subjt:  GDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE

Q63396 Activated RNA polymerase II transcriptional coactivator p159.3e-1035.71Show/hide
Query:  GDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE
        G++  +    K S  + +  + ++ K R V VR+++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L   + +ID AV +
Subjt:  GDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE

Arabidopsis top hitse value%identityAlignment
AT4G10920.1 transcriptional coactivator p15 (PC4) family protein (KELP)4.9e-1442.11Show/hide
Query:  KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS
        K+ DD  ++++C LS  RRV ++ ++GK +V IRE+Y KDGK++P  KGISL+ +QW+    ++  I+ AV +  S
Subjt:  KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS

AT5G09240.1 ssDNA-binding transcriptional regulator2.4e-2152.29Show/hide
Query:  MSASGKRK------GDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQWNVLLNHVEE
        MS +GKRK       D+ D SE  APP K   K +D+ ++I +C L KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLSL+QWN L NH E+
Subjt:  MSASGKRK------GDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQWNVLLNHVEE

Query:  IDKAVNENS
        IDKA++E S
Subjt:  IDKAVNENS

AT5G09240.2 ssDNA-binding transcriptional regulator8.1e-1741.61Show/hide
Query:  MSASGKRK------GDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSLD-----------
        MS +GKRK       D+ D SE  APP K   K +D+ ++I +C L KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLSL+           
Subjt:  MSASGKRK------GDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSLD-----------

Query:  -----------------QWNVLLNHVEEIDKAVNENS
                         QWN L NH E+IDKA++E S
Subjt:  -----------------QWNVLLNHVEEIDKAVNENS

AT5G09250.1 ssDNA-binding transcriptional regulator2.9e-3062.62Show/hide
Query:  MSASGKRKGDE----DDVSEGDAPPSKTFK--KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID
        MS+ GKRK ++    DD SE  AP  K  K   DSD +D+IVVC +SKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN L NH E+I+
Subjt:  MSASGKRKGDE----DDVSEGDAPPSKTFK--KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

AT5G09250.2 ssDNA-binding transcriptional regulator7.8e-2062.96Show/hide
Query:  MSASGKRKGDE----DDVSEGDAPPSKTFK--KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MS+ GKRK ++    DD SE  AP  K  K   DSD +D+IVVC +SKNRRV VRNW GKI +DIREFYVKDGK +PGKKG
Subjt:  MSASGKRKGDE----DDVSEGDAPPSKTFK--KDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAAGTGGAAAGCGAAAGGGCGATGAAGATGACGTATCCGAAGGAGATGCTCCTCCTTCCAAAACATTCAAGAAAGATTCTGACGATACCGATGAAATCGTTGT
TTGCGAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAACTGGCAAGGAAAGATTGTTGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGA
AAGGCATCTCGCTGTCCTTGGATCAGTGGAACGTTCTTCTAAATCACGTAGAAGAAATTGACAAGGCTGTTAATGAAAACTCGTCAGGAGATTAG
mRNA sequenceShow/hide mRNA sequence
GAAATTTATTAGAAATTTAGTTGGTAATTGTTGCGTTTGTGATGCGTTTTTGTATATTACGGGAATTCCGCGGCATTGAGTTGGTAAGTGTTTTGAGGAGCAAAGAGTTT
GTGAAGAAGTAGAAGAAGTCGAAGAAAAGAAAGCAAGCAAAAAAAGGAGGAAGAAAAATGTCTGCAAGTGGAAAGCGAAAGGGCGATGAAGATGACGTATCCGAAGGAGA
TGCTCCTCCTTCCAAAACATTCAAGAAAGATTCTGACGATACCGATGAAATCGTTGTTTGCGAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAACTGGCAAGGAAAGA
TTGTTGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGAAAGGCATCTCGCTGTCCTTGGATCAGTGGAACGTTCTTCTAAATCACGTAGAA
GAAATTGACAAGGCTGTTAATGAAAACTCGTCAGGAGATTAGAACATGCATCTTTTGTTGATATGTGTAGCAAGTGTATTGCTCCGTAGGGTTAAGGACGAAACTGTGAC
CTTTTGTACAGCCAATGGGCTTGTTTTTGGTGGAAATGAACACTAGAGAGCAGGCATATTAGCATTTATGTATACATTATCACTGGATCAATATTTTGAGTTGTAGACCA
GAGACATTATATTATTATAATATAGTATGGGCTAACAGAAAATATTACTACTCTCAATTAGTGGATAATTGGGTATCCAGTGGACATTTTAACCAGTAGTCTGATTAGGT
TACAGCAATTCTAAGAGAGAGTCCAAGTTTCTAACTACTTTGAAACTCTTATTACATATTTAGCTTCAATGCCCTCAGTTCTTGAGCCCACAAAGTGTAGCTTGAATTCT
TTGCTATGACATCTTTAGAAACCTCCTTTCTTTCAATCAATCCTCTGGCATACCTTTCAAAGTTTTCAAGACTTTTCCATATTGGAGCCAACTTTCTGACATCTCCATCT
CTTTTAATGATTTCCAGTAGGTCTTTGGCTTCCTCCAACCTTGCCCAAAAGCATGAATCTTGGGTCAAGCTTGCATATTTCATCCTCTGAGTATTCCCTTCCTCTGTGAC
TTCTCTTCCTCTCCACCATTTGTCAAAAATCTCATATCTTCTCTCTCTTCCGCATTTCAAATAATGACCATGGACAATGTGCATATCACGATGGTAATATTCCGCAATGT
CCAATGGCTCTACCAGGAGTTTGTAGAATTGTGAAGCATTGACCCACTTTGCCCTCGTGTTAAAATCTGGAGGAAGCTCATTGTTCTCCCACATGTTGATCACTCTGTTC
CAGAATGTTGCGAGCTTGTGCCTGTTCATATTTACTCGGTCATGTCTTACCGAAGCATCTTCTTTCTTGAAGCAATCGTAGTAACCCAATTGGTTATCTGCTTCCTCACA
AGAGGCTTTGTACCATTCTATCTCAGCTCTGTAAGGTGTAATCTTCGATAAGCTTATAGCTAGTTTTGCAGCATTCATGTTTGGTGTTTGTCCTATTCTGCTTGCTGTTC
TCAAGCAATGTTCGGCTATTTGAGCAACTTCATC
Protein sequenceShow/hide protein sequence
MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD