; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G20100 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G20100
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionE3 ubiquitin-protein ligase CHFR isoform X3
Genome locationChr4:18157470..18171503
RNA-Seq ExpressionCSPI04G20100
SyntenyCSPI04G20100
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR040909 - E3 ubiquitin-protein ligase CHFR, cysteine rich domain with multizinc binding


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146401.2 E3 ubiquitin-protein ligase CHFR isoform X1 [Cucumis sativus]1.6e-10398.91Show/hide
Query:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
        +DILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
Subjt:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL

Query:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
        GCDRAFCGAYW+AQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
Subjt:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
XP_008442085.1 PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X1 [Cucumis melo]1.1e-9995.63Show/hide
Query:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
        +DILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRN+KRP F+LGLEESGGLELPCPQCGTEYAGFRC+PHMVHLQCH CGGMMPSRFDTGIPQHCL
Subjt:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL

Query:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
        GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPIS RTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRF+NREI
Subjt:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
XP_008442086.1 PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X2 [Cucumis melo]1.1e-9995.63Show/hide
Query:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
        +DILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRN+KRP F+LGLEESGGLELPCPQCGTEYAGFRC+PHMVHLQCH CGGMMPSRFDTGIPQHCL
Subjt:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL

Query:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
        GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPIS RTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRF+NREI
Subjt:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
XP_016899584.1 PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X3 [Cucumis melo]1.1e-9995.63Show/hide
Query:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
        +DILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRN+KRP F+LGLEESGGLELPCPQCGTEYAGFRC+PHMVHLQCH CGGMMPSRFDTGIPQHCL
Subjt:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL

Query:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
        GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPIS RTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRF+NREI
Subjt:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
XP_031739669.1 E3 ubiquitin-protein ligase CHFR isoform X3 [Cucumis sativus]1.6e-10398.91Show/hide
Query:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
        +DILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
Subjt:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL

Query:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
        GCDRAFCGAYW+AQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
Subjt:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
TrEMBL top hitse value%identityAlignment
A0A0A0KYR0 RING-type domain-containing protein3.2e-10594.9Show/hide
Query:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
        +DILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
Subjt:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL

Query:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREIGCFCISLLTQKLF
        GCDRAFCGAYW+AQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREIG F  +L    LF
Subjt:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREIGCFCISLLTQKLF
A0A1S3B4G1 E3 ubiquitin-protein ligase CHFR isoform X15.2e-10095.63Show/hide
Query:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
        +DILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRN+KRP F+LGLEESGGLELPCPQCGTEYAGFRC+PHMVHLQCH CGGMMPSRFDTGIPQHCL
Subjt:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL

Query:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
        GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPIS RTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRF+NREI
Subjt:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
A0A1S3B4V7 E3 ubiquitin-protein ligase CHFR isoform X25.2e-10095.63Show/hide
Query:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
        +DILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRN+KRP F+LGLEESGGLELPCPQCGTEYAGFRC+PHMVHLQCH CGGMMPSRFDTGIPQHCL
Subjt:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL

Query:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
        GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPIS RTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRF+NREI
Subjt:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
A0A1S4DUC8 E3 ubiquitin-protein ligase CHFR isoform X35.2e-10095.63Show/hide
Query:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL
        +DILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRN+KRP F+LGLEESGGLELPCPQCGTEYAGFRC+PHMVHLQCH CGGMMPSRFDTGIPQHCL
Subjt:  KDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCL

Query:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
        GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPIS RTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRF+NREI
Subjt:  GCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
A0A6J1F3R3 E3 ubiquitin-protein ligase CHFR isoform X22.7e-8887.29Show/hide
Query:  ILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCLGC
        ILQ DSSLRRSVEEIA LDSCSLIQSNLVIGS KKR QKRPH +LG EESG LELPCPQCGTEYAGFRCNP+ VHLQCH CGGMMPSRFD GIPQHCLGC
Subjt:  ILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCLGC

Query:  DRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
        DRAFCGAYW+AQ LQRS  YATC+PET KPIS RTISRIPQLTHENN+HEQDIT RCISQMGKTLQDVISEWIV+F+NREI
Subjt:  DRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G47570.1 RING/U-box superfamily protein1.2e-5353.26Show/hide
Query:  RKDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHC
        +++IL+ D++LRR  E+IA LDS + IQSNL+IGS +KR    P      EE   L L CPQC     G+RC  H  HLQCH C GMMP R +  +P HC
Subjt:  RKDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHC

Query:  LGCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
         GCDR FCGAYW ++++ +      C  ETF+PIS RTI+RIP +THE NRHEQDIT RCI+ M KT+ DV++EW+  F+NREI
Subjt:  LGCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
AT1G47570.2 RING/U-box superfamily protein1.2e-5353.26Show/hide
Query:  RKDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHC
        +++IL+ D++LRR  E+IA LDS + IQSNL+IGS +KR    P      EE   L L CPQC     G+RC  H  HLQCH C GMMP R +  +P HC
Subjt:  RKDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHC

Query:  LGCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI
         GCDR FCGAYW ++++ +      C  ETF+PIS RTI+RIP +THE NRHEQDIT RCI+ M KT+ DV++EW+  F+NREI
Subjt:  LGCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFSNREI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGATACAAGCCCAGAAGACGGAGGACAAATCGGACGTCTCACGTGCTCACACGCGCCGGCGCGTGGGTGAAGACGACGAGGATTCCGGCGGCGCGTGAAGATCA
CACGCGGTGTTTTCCGGCGATCGGCGAAGACAGACTTGGGAAGACGGAGGTGGTGCTTCTTATGGTATGGGCGGTGTCGACAAACGGTCAGCGGAAGGATATATTGCAAG
CTGATTCTTCCCTTAGACGTTCGGTTGAAGAAATTGCTACTTTGGATTCTTGTTCATTAATACAATCAAATCTGGTCATTGGGTCTGTGAAAAAGCGAAACCAAAAAAGG
CCTCATTTTTTATTGGGCCTGGAGGAGAGCGGTGGTTTAGAGCTTCCATGCCCTCAATGTGGTACTGAATATGCTGGATTTCGCTGTAATCCACACATGGTTCATCTACA
ATGTCATGAATGTGGAGGAATGATGCCTTCTCGATTTGATACTGGGATACCTCAACATTGTTTAGGTTGTGATAGAGCATTTTGTGGTGCATATTGGCAAGCTCAGAGTT
TACAAAGAAGTGATATATACGCCACTTGCAGTCCCGAAACTTTTAAACCAATCTCCAGACGTACAATCTCAAGAATTCCACAGTTGACACATGAAAATAATCGGCATGAA
CAGGATATTACGGGGAGGTGCATTAGTCAGATGGGTAAAACATTGCAAGATGTCATCTCGGAATGGATTGTAAGGTTTAGCAACAGAGAAATTGGATGCTTTTGTATATC
GCTACTGACTCAAAAGTTGTTTGGAATAGTACTTTAA
mRNA sequenceShow/hide mRNA sequence
AGAAAATCAATCCAAAAAGCTGCAAAATCGGAAAAAGACCCAAAACCAATAGCGTAAACTTCAGTTTTCGTCGAACCTGAGTGCTATTTGATGGACCCAATGGTACAGAT
TGACCGGAAACAATGGTTCGATACAAGCCCAGAAGACGGAGGACAAATCGGACGTCTCACGTGCTCACACGCGCCGGCGCGTGGGTGAAGACGACGAGGATTCCGGCGGC
GCGTGAAGATCACACGCGGTGTTTTCCGGCGATCGGCGAAGACAGACTTGGGAAGACGGAGGTGGTGCTTCTTATGGTATGGGCGGTGTCGACAAACGGTCAGCGGAAGG
ATATATTGCAAGCTGATTCTTCCCTTAGACGTTCGGTTGAAGAAATTGCTACTTTGGATTCTTGTTCATTAATACAATCAAATCTGGTCATTGGGTCTGTGAAAAAGCGA
AACCAAAAAAGGCCTCATTTTTTATTGGGCCTGGAGGAGAGCGGTGGTTTAGAGCTTCCATGCCCTCAATGTGGTACTGAATATGCTGGATTTCGCTGTAATCCACACAT
GGTTCATCTACAATGTCATGAATGTGGAGGAATGATGCCTTCTCGATTTGATACTGGGATACCTCAACATTGTTTAGGTTGTGATAGAGCATTTTGTGGTGCATATTGGC
AAGCTCAGAGTTTACAAAGAAGTGATATATACGCCACTTGCAGTCCCGAAACTTTTAAACCAATCTCCAGACGTACAATCTCAAGAATTCCACAGTTGACACATGAAAAT
AATCGGCATGAACAGGATATTACGGGGAGGTGCATTAGTCAGATGGGTAAAACATTGCAAGATGTCATCTCGGAATGGATTGTAAGGTTTAGCAACAGAGAAATTGGATG
CTTTTGTATATCGCTACTGACTCAAAAGTTGTTTGGAATAGTACTTTAA
Protein sequenceShow/hide protein sequence
MVRYKPRRRRTNRTSHVLTRAGAWVKTTRIPAAREDHTRCFPAIGEDRLGKTEVVLLMVWAVSTNGQRKDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKR
PHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHE
QDITGRCISQMGKTLQDVISEWIVRFSNREIGCFCISLLTQKLFGIVL