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CSPI04G20130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G20130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionE3 ubiquitin-protein ligase CHFR isoform X1
Genome locationChr4:18188790..18192468
RNA-Seq ExpressionCSPI04G20130
SyntenyCSPI04G20130
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146401.2 E3 ubiquitin-protein ligase CHFR isoform X1 [Cucumis sativus]1.7e-30100Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
XP_008442086.1 PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X2 [Cucumis melo]1.1e-2997.14Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAEIGECSASNSS+ENWAKLIPTDKMY DIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
XP_016899584.1 PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X3 [Cucumis melo]1.1e-2997.14Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAEIGECSASNSS+ENWAKLIPTDKMY DIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
XP_031739668.1 E3 ubiquitin-protein ligase CHFR isoform X2 [Cucumis sativus]1.7e-30100Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
XP_031739669.1 E3 ubiquitin-protein ligase CHFR isoform X3 [Cucumis sativus]1.7e-30100Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
TrEMBL top hitse value%identityAlignment
A0A0A0KYR0 RING-type domain-containing protein8.2e-31100Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
A0A1S3B4G1 E3 ubiquitin-protein ligase CHFR isoform X15.3e-3097.14Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAEIGECSASNSS+ENWAKLIPTDKMY DIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
A0A1S3B4V7 E3 ubiquitin-protein ligase CHFR isoform X25.3e-3097.14Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAEIGECSASNSS+ENWAKLIPTDKMY DIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
A0A1S4DUC8 E3 ubiquitin-protein ligase CHFR isoform X35.3e-3097.14Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAEIGECSASNSS+ENWAKLIPTDKMY DIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
A0A6J1HW48 E3 ubiquitin-protein ligase CHFR isoform X14.3e-2481.43Show/hide
Query:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        MAE+GECSASNSS++NWAKLI  DK YADIEINSDE VIFSETKS+SV+K+EWCKITRNSD+N+ TLQNR
Subjt:  MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G47570.1 RING/U-box superfamily protein7.6e-1348.57Show/hide
Query:  AEIGECSASNSSMEN-WAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        AE G+ S S  S ++ WAKL+P D  ++DIEI  ++ VI SE K +S+EKHEWC+IT+N   ++AT+ N+
Subjt:  AEIGECSASNSSMEN-WAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
AT1G47570.2 RING/U-box superfamily protein1.9e-0848Show/hide
Query:  IPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR
        +P D  ++DIEI  ++ VI SE K +S+EKHEWC+IT+N   ++AT+ N+
Subjt:  IPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAATTGGAGAGTGCTCTGCTTCAAATTCATCCATGGAAAACTGGGCGAAGCTAATTCCAACTGATAAAATGTATGCGGATATTGAGATAAACTCTGATGAGAC
GGTTATCTTCTCGGAGACAAAATCCACATCTGTTGAAAAACATGAATGGTGCAAAATCACAAGGAATTCAGATCTAAATACTGCCACTCTGCAGAATAGAAGACCACCAT
TCATGAAGAAAGTGACTACTAATGATTTGGTAAAATGA
mRNA sequenceShow/hide mRNA sequence
AAAATTGTTTCATTTCAAAATTCTCAATCTTCTCCTTCTCCTACTGGCGGTATGGCGGAAATTGGAGAGTGCTCTGCTTCAAATTCATCCATGGAAAACTGGGCGAAGCT
AATTCCAACTGATAAAATGTATGCGGATATTGAGATAAACTCTGATGAGACGGTTATCTTCTCGGAGACAAAATCCACATCTGTTGAAAAACATGAATGGTGCAAAATCA
CAAGGAATTCAGATCTAAATACTGCCACTCTGCAGAATAGAAGACCACCATTCATGAAGAAAGTGACTACTAATGATTTGGTAAAATGA
Protein sequenceShow/hide protein sequence
MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNRRPPFMKKVTTNDLVK