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CSPI04G20480 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G20480
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:18654219..18654823
RNA-Seq ExpressionCSPI04G20480
SyntenyCSPI04G20480
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060707.1 hypothetical protein E6C27_scaffold496G00110 [Cucumis melo var. makuwa]8.5e-3587.1Show/hide
Query:  MSSPTTLMATSRNILPLEPTTLTNDAL-SFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSSPSPLRNNLKC
        MSSPTTLMATSRN LPLEPTTLTNDAL +F+QRSSRHLATTTTPTSR SNSLKLSKG+ EQTST THSTL SCKPKGP+RWSSPSPLRNN++C
Subjt:  MSSPTTLMATSRNILPLEPTTLTNDAL-SFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSSPSPLRNNLKC

KAG6595583.1 hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia]7.5e-0740.74Show/hide
Query:  MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSS
        M PR   FL I  F L ++SSP+T++ATSR++L L+            + S         PTS   ++L L  G  +       S ++SCKPKGP+RWSS
Subjt:  MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSS

Query:  PSPLRNNL
        PSP+RNNL
Subjt:  PSPLRNNL

KGN54790.1 hypothetical protein Csa_012154 [Cucumis sativus]1.0e-2770.27Show/hide
Query:  MTPRCFPFLFIYLFFLFIMSSPTTL-MATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWS
        M  RCFPFLFIYL FLFIMSS T L MATSRN+LPL PTTLTN+AL F Q+SSR+L  TTT T   S +LK+ K   EQTST THSTLQSC PKGPI WS
Subjt:  MTPRCFPFLFIYLFFLFIMSSPTTL-MATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWS

Query:  SPSPLRNNLKC
        SPSP RN ++C
Subjt:  SPSPLRNNLKC

KGN54792.1 hypothetical protein Csa_012277 [Cucumis sativus]5.9e-52100Show/hide
Query:  MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSS
        MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSS
Subjt:  MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSS

Query:  PSPLRNNLKC
        PSPLRNNLKC
Subjt:  PSPLRNNLKC

TrEMBL top hitse value%identityAlignment
A0A0A0KYN0 Uncharacterized protein4.9e-2870.27Show/hide
Query:  MTPRCFPFLFIYLFFLFIMSSPTTL-MATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWS
        M  RCFPFLFIYL FLFIMSS T L MATSRN+LPL PTTLTN+AL F Q+SSR+L  TTT T   S +LK+ K   EQTST THSTLQSC PKGPI WS
Subjt:  MTPRCFPFLFIYLFFLFIMSSPTTL-MATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWS

Query:  SPSPLRNNLKC
        SPSP RN ++C
Subjt:  SPSPLRNNLKC

A0A0A0L2F6 Uncharacterized protein2.8e-52100Show/hide
Query:  MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSS
        MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSS
Subjt:  MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSS

Query:  PSPLRNNLKC
        PSPLRNNLKC
Subjt:  PSPLRNNLKC

A0A5A7V1K1 Uncharacterized protein4.1e-3587.1Show/hide
Query:  MSSPTTLMATSRNILPLEPTTLTNDAL-SFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSSPSPLRNNLKC
        MSSPTTLMATSRN LPLEPTTLTNDAL +F+QRSSRHLATTTTPTSR SNSLKLSKG+ EQTST THSTL SCKPKGP+RWSSPSPLRNN++C
Subjt:  MSSPTTLMATSRNILPLEPTTLTNDAL-SFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSSPSPLRNNLKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCAAGGTGTTTTCCTTTCCTTTTCATATATCTGTTCTTCCTCTTCATCATGTCTTCTCCTACAACCCTGATGGCAACTTCAAGAAACATCCTCCCTTTAGAACC
CACAACATTGACTAACGATGCATTATCCTTCGTTCAACGATCATCTCGACACCTAGCTACAACTACGACTCCTACTTCTCGTCGCTCTAACTCTCTTAAACTTTCTAAAG
GAAGGCATGAACAAACGTCAACAAAGACTCATTCAACCCTTCAAAGTTGCAAGCCAAAAGGACCTATTAGATGGTCTTCTCCTAGTCCATTACGTAATAATTTGAAATGC
TAA
mRNA sequenceShow/hide mRNA sequence
GTTTACCTTTACTGTTTTGAATTATTTGATTTGTTATTCCTATATCATATCTTCAATGACTCCAAGGTGTTTTCCTTTCCTTTTCATATATCTGTTCTTCCTCTTCATCA
TGTCTTCTCCTACAACCCTGATGGCAACTTCAAGAAACATCCTCCCTTTAGAACCCACAACATTGACTAACGATGCATTATCCTTCGTTCAACGATCATCTCGACACCTA
GCTACAACTACGACTCCTACTTCTCGTCGCTCTAACTCTCTTAAACTTTCTAAAGGAAGGCATGAACAAACGTCAACAAAGACTCATTCAACCCTTCAAAGTTGCAAGCC
AAAAGGACCTATTAGATGGTCTTCTCCTAGTCCATTACGTAATAATTTGAAATGCTAAAAATTCTTAGTTTTCGAGCTTAACAGTTTTTCATCACGAATAATATCATTTA
TGTATGACTTTTTAATTCTTGTTTTCTTCTTATTTACGTGTATCGATATGATATACTACGATTTTCAGCCTTAAAATCATTTATACCTTATTTTTGTTTTTCTTCATTAA
TTTATGTACTATTATGGTTGATTCAATATATGAAGATAAATATGTGTTCTAATAG
Protein sequenceShow/hide protein sequence
MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTTPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSSPSPLRNNLKC