; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G20530 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G20530
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S ribosomal protein L35a-1-like
Genome locationChr4:18735522..18738731
RNA-Seq ExpressionCSPI04G20530
SyntenyCSPI04G20530
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR018266 - Ribosomal protein L35Ae, conserved site
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442180.1 PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo]3.6e-5799.11Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

XP_011653915.1 60S ribosomal protein L35a-1 [Cucumis sativus]7.3e-58100Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

XP_022928725.1 60S ribosomal protein L35a-1-like [Cucurbita moschata]8.1e-5798.21Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

XP_022967923.1 60S ribosomal protein L35a-1-like [Cucurbita maxima]1.6e-5799.11Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

XP_038883794.1 60S ribosomal protein L35a-1-like [Benincasa hispida]9.5e-5899.11Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

TrEMBL top hitse value%identityAlignment
A0A1S3B4N4 60S ribosomal protein L35a-1-like1.8e-5799.11Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

A0A5A7TGR3 60S ribosomal protein L35a-1-like1.8e-5799.11Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

A0A6J1EL43 60S ribosomal protein L35a-1-like3.9e-5798.21Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

A0A6J1HSC2 60S ribosomal protein L35a-1-like1.6e-5594.64Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG +GER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKIRVFMYPSNI

A0A6J1HTF7 60S ribosomal protein L35a-1-like7.9e-5899.11Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
        DKIRVFMYPSNI
Subjt:  DKIRVFMYPSNI

SwissProt top hitse value%identityAlignment
P41056 60S ribosomal protein L33-B8.2e-2854.29Show/hide
Query:  ERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFM
        E  RLYV+G  L Y+RSK    P  SLI+IEGV T +E  +Y GKR+AY+Y+A  +  G+  R +WGKV+R HGNSG+VRA F++NLP K+ G  +R+F+
Subjt:  ERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFM

Query:  YPSNI
        YPSNI
Subjt:  YPSNI

P51422 60S ribosomal protein L35a-45.6e-5384.68Show/hide
Query:  VKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGER+RLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KIRVFMYPSNI
        ++RVFMYPSNI
Subjt:  KIRVFMYPSNI

Q9C912 60S ribosomal protein L35a-33.9e-5484.82Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGER+RLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
         ++RVFMYPSNI
Subjt:  DKIRVFMYPSNI

Q9FZH0 60S ribosomal protein L35a-24.3e-5385.59Show/hide
Query:  VKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGER+RLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KIRVFMYPSNI
        ++RVFMYPSNI
Subjt:  KIRVFMYPSNI

Q9LMK0 60S ribosomal protein L35a-13.9e-5483.93Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGER+RLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
         ++RVFMYPSNI
Subjt:  DKIRVFMYPSNI

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein2.8e-5583.93Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGER+RLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
         ++RVFMYPSNI
Subjt:  DKIRVFMYPSNI

AT1G41880.1 Ribosomal protein L35Ae family protein3.1e-5485.59Show/hide
Query:  VKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGER+RLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KIRVFMYPSNI
        ++RVFMYPSNI
Subjt:  KIRVFMYPSNI

AT1G74270.1 Ribosomal protein L35Ae family protein2.8e-5584.82Show/hide
Query:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGER+RLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKIRVFMYPSNI
         ++RVFMYPSNI
Subjt:  DKIRVFMYPSNI

AT3G55750.1 Ribosomal protein L35Ae family protein4.0e-5484.68Show/hide
Query:  VKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGER+RLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KIRVFMYPSNI
        ++RVFMYPSNI
Subjt:  KIRVFMYPSNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGGAAGGCAGGGAGAACGAATCAGACTCTACGTCAGAGGAACGGTTCTTGGATACAAGAGGTCGAAATCTAATCAGTATCCAAGAACATCCCTGATTCAAAT
TGAAGGAGTGAACACCAGGGAAGAGGTCGCGTGGTATGCTGGAAAGCGCTTGGCATACATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTACCGATGCATTTGGG
GCAAGGTTTCCAGGCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCAAACTTGCCCCCAAAATCCATGGGTGACAAAATTAGGGTATTTATGTATCCCAGC
AATATATGA
mRNA sequenceShow/hide mRNA sequence
TTTCAAAGAGAATATTGAAAACAACGAAGTTAACCTAACAGAGAGAGAAACCCTAGAAGTGCTCTAAATCATCTTGACCCTCAAATCCCCATTATAAAAGCTTCCTCTTC
TAATATCAGCCACCTTCTTCTTTGAACCGCAGCTCCATCTTCCTCACTTCAACCTCCAAGTCTAAGTCGTTTTTCAAAACCCTAGACTGCGACAGCCATGGTGAAGGGAA
GGCAGGGAGAACGAATCAGACTCTACGTCAGAGGAACGGTTCTTGGATACAAGAGGTCGAAATCTAATCAGTATCCAAGAACATCCCTGATTCAAATTGAAGGAGTGAAC
ACCAGGGAAGAGGTCGCGTGGTATGCTGGAAAGCGCTTGGCATACATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTACCGATGCATTTGGGGCAAGGTTTCCAG
GCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCAAACTTGCCCCCAAAATCCATGGGTGACAAAATTAGGGTATTTATGTATCCCAGCAATATATGAGTTC
CTCTGATCAGCTAGCTAGAGGTCAGGTTTCATTTCTTTGTTGACTTGGGGTGGATCCATATTTTTGATTTACGTCTTCCTATCGGACCCAATGTTTAGATGTTTTTGTTT
TCATGTAAAACTTGAGTAAGTTTGGAATGTTCATTATGGAATATTACTTTCAATTTTGACGAAGTTTCATTTCACATCAAGGCTTTCTGCAAAGACATGCATGCAGAGCA
TCAATGGTGGTCGCTATACTTGCATTATTATGAAATGTTTATTTGCTGACCTAAATTCTTTATTTTATTATTTTGAAGGTTGATATTACTTGATACCATAGACTGTTAAA
CTTTTGATGCCACCATTCACGTTAAATTGAAAAATTATGTGGG
Protein sequenceShow/hide protein sequence
MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPS
NI