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CSPI04G20600 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G20600
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING finger protein 165-like
Genome locationChr4:18840022..18840606
RNA-Seq ExpressionCSPI04G20600
SyntenyCSPI04G20600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043526.1 RING finger protein 165-like protein [Cucumis melo var. makuwa]1.4e-2369.57Show/hide
Query:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHS--SVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP
        G TLI FSNL HP QQQSI FLVN+FL  FNLHS  S  + IC KILSFALQF  +  S KIEAN+ +++DLIIGEQGFQETP PPRTTG P
Subjt:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHS--SVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP

KAE8649744.1 hypothetical protein Csa_012829 [Cucumis sativus]1.4e-1544.53Show/hide
Query:  MFSFRLPKHPSIPHCSISVFQPSHHFRSNTSTDSLNPHGNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEA
        MFSFRLPKHPSIPHCSIS                                                                      FCAIPPS KIEA
Subjt:  MFSFRLPKHPSIPHCSISVFQPSHHFRSNTSTDSLNPHGNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEA

Query:  NIANMDDLIIGEQGFQETPPPPRTTGVP
        NIANMDDLIIGEQGFQETPPPPRTTGVP
Subjt:  NIANMDDLIIGEQGFQETPPPPRTTGVP

XP_008442291.1 PREDICTED: RING finger protein 165-like [Cucumis melo]9.3e-2877.78Show/hide
Query:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP
        G+TLI FSNL HPRQQQSI FLVNQFLC FNLHSSV + IC++ILSFALQF AI PS KIEANI +++DLIIGEQGFQET PPPRT G P
Subjt:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP

XP_008457277.1 PREDICTED: RING finger protein 165-like [Cucumis melo]1.3e-0543.16Show/hide
Query:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPP---PPRTTGVPGV
        G  L   SNL  P QQQ + +LVN+FL  FNL SSV +II + ILSFA QF      +KIEAN+ ++      ++ + E PP   P  T G  G+
Subjt:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPP---PPRTTGVPGV

XP_038876917.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida]8.7e-1045.37Show/hide
Query:  PHGNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDL------------IIGEQG----FQETPP
        P G  L  F+N+    ++ ++ FLVN FL  FNLHSSV Q++  KILSFA QF A   S KIEANI  M +             IIGE+G    F+E PP
Subjt:  PHGNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDL------------IIGEQG----FQETPP

Query:  PPRTTGVP
        P R  G P
Subjt:  PPRTTGVP

TrEMBL top hitse value%identityAlignment
A0A0A0L1B0 Uncharacterized protein2.2e-6799.22Show/hide
Query:  MFSFRLPKHPSIPHCSISVFQPSHHFRSNTSTDSLNPHGNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEA
        MFSFRLPKHPSIPHCSISVFQPSHHFRSNTSTDSLNPHGNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPS KIEA
Subjt:  MFSFRLPKHPSIPHCSISVFQPSHHFRSNTSTDSLNPHGNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEA

Query:  NIANMDDLIIGEQGFQETPPPPRTTGVP
        NIANMDDLIIGEQGFQETPPPPRTTGVP
Subjt:  NIANMDDLIIGEQGFQETPPPPRTTGVP

A0A1S3B605 RING finger protein 165-like4.5e-2877.78Show/hide
Query:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP
        G+TLI FSNL HPRQQQSI FLVNQFLC FNLHSSV + IC++ILSFALQF AI PS KIEANI +++DLIIGEQGFQET PPPRT G P
Subjt:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP

A0A5A7TNB0 RING finger protein 165-like protein6.7e-2469.57Show/hide
Query:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHS--SVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP
        G TLI FSNL HP QQQSI FLVN+FL  FNLHS  S  + IC KILSFALQF  +  S KIEAN+ +++DLIIGEQGFQETP PPRTTG P
Subjt:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHS--SVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP

A0A5D3CSM6 RING finger protein 165-like6.3e-0643.16Show/hide
Query:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPP---PPRTTGVPGV
        G  L   SNL  P QQQ + +LVN+FL  FNL SSV +II + ILSFA QF      +KIEAN+ ++      ++ + E PP   P  T G  G+
Subjt:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPP---PPRTTGVPGV

A0A5D3CVT7 RING finger protein 165-like protein4.5e-2877.78Show/hide
Query:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP
        G+TLI FSNL HPRQQQSI FLVNQFLC FNLHSSV + IC++ILSFALQF AI PS KIEANI +++DLIIGEQGFQET PPPRT G P
Subjt:  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLIIGEQGFQETPPPPRTTGVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCTTTCCGCCTCCCCAAACACCCATCAATTCCTCATTGTTCGATTTCAGTATTCCAGCCGTCTCATCACTTTAGATCAAATACTTCAACAGACTCCCTCAACCC
TCATGGGAATACTCTGATTCTTTTTTCTAATCTCCTCCACCCTCGACAACAACAATCAATTCACTTTTTGGTTAATCAGTTTCTGTGTTTCTTCAACCTCCATTCCTCTG
TTTTCCAAATCATTTGTTATAAGATTCTCTCCTTTGCTCTACAGTTTTGTGCCATTCCTCCGAGCTTGAAAATTGAAGCCAACATCGCTAATATGGATGACTTGATTATC
GGAGAGCAAGGATTTCAAGAAACTCCTCCACCCCCAAGGACAACAGGGGTGCCCGGAGTTTGCAATTGA
mRNA sequenceShow/hide mRNA sequence
GAAAACAGCCCTTAGCAAAACTTGACTCCCAAGAAAGAAAGAAAAAAAAGAGCCGTTGGTGGTGACGTGGATTTTTCCATCCTGTCTGAAATTCCACCAACTATCTCAAA
TTCATCAATTCCATTCCACACTCTTAGTCTTACCTTCATCATCTATCATCATGTCTCCCTCTACTTCTTCCTTTCAATGTTCTCTTTCCGCCTCCCCAAACACCCATCAA
TTCCTCATTGTTCGATTTCAGTATTCCAGCCGTCTCATCACTTTAGATCAAATACTTCAACAGACTCCCTCAACCCTCATGGGAATACTCTGATTCTTTTTTCTAATCTC
CTCCACCCTCGACAACAACAATCAATTCACTTTTTGGTTAATCAGTTTCTGTGTTTCTTCAACCTCCATTCCTCTGTTTTCCAAATCATTTGTTATAAGATTCTCTCCTT
TGCTCTACAGTTTTGTGCCATTCCTCCGAGCTTGAAAATTGAAGCCAACATCGCTAATATGGATGACTTGATTATCGGAGAGCAAGGATTTCAAGAAACTCCTCCACCCC
CAAGGACAACAGGGGTGCCCGGAGTTTGCAATTGA
Protein sequenceShow/hide protein sequence
MFSFRLPKHPSIPHCSISVFQPSHHFRSNTSTDSLNPHGNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSLKIEANIANMDDLII
GEQGFQETPPPPRTTGVPGVCN