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CSPI04G20640 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G20640
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCytosolic Fe-S cluster assembly factor NBP35
Genome locationChr4:18852735..18855989
RNA-Seq ExpressionCSPI04G20640
SyntenyCSPI04G20640
Gene Ontology termsGO:0016226 - iron-sulfur cluster assembly (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR019591 - Mrp/NBP35 ATP-binding protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041215.1 cytosolic Fe-S cluster assembly factor NBP35 [Cucumis melo var. makuwa]1.2e-17100Show/hide
Query:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
Subjt:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

KAE8649747.1 hypothetical protein Csa_012684 [Cucumis sativus]3.8e-2795.52Show/hide
Query:  PFGVDIKFTKSSSALKKKTQLMENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        P   DIKFTKSSSALKKKTQLMENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
Subjt:  PFGVDIKFTKSSSALKKKTQLMENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

XP_004144673.1 cytosolic Fe-S cluster assembly factor NBP35 [Cucumis sativus]1.2e-17100Show/hide
Query:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
Subjt:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

XP_008442190.1 PREDICTED: cytosolic Fe-S cluster assembly factor NBP35 [Cucumis melo]1.2e-17100Show/hide
Query:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
Subjt:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

XP_038883029.1 cytosolic Fe-S cluster assembly factor NBP35 [Benincasa hispida]6.1e-1795.65Show/hide
Query:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        MEN+EIPENANENCPGP+SESAGKSDACQGCPNQSICATAPKGPDP
Subjt:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

TrEMBL top hitse value%identityAlignment
A0A0A0KZC4 Uncharacterized protein5.7e-2985.9Show/hide
Query:  FGVDIKFTKSSSALKKKTQLMENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDPVHVLFRLIGLFC
        FG DIKFTKSSSALKKKTQLMENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP  +    +  FC
Subjt:  FGVDIKFTKSSSALKKKTQLMENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDPVHVLFRLIGLFC

A0A1S3B5W7 Cytosolic Fe-S cluster assembly factor NBP355.9e-18100Show/hide
Query:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
Subjt:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

A0A5D3CXN2 Cytosolic Fe-S cluster assembly factor NBP355.9e-18100Show/hide
Query:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
Subjt:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

A0A5E4ER36 Cytosolic Fe-S cluster assembly factor NBP351.9e-1675.41Show/hide
Query:  KSSSALKKKTQ---LMENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        K S  LK K +   +MENSEIPENANE+CPGP+S+SAGKSDAC+GCPNQ ICATAPKGPDP
Subjt:  KSSSALKKKTQ---LMENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

A0A6J1JQ09 Cytosolic Fe-S cluster assembly factor NBP351.5e-1693.48Show/hide
Query:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        MEN EIPE+ANENCPGP+SESAGKSDACQGCPNQSICATAPKGPDP
Subjt:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

SwissProt top hitse value%identityAlignment
P0CO88 Cytosolic Fe-S cluster assembly factor NBP351.6e-1268.09Show/hide
Query:  IPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDPVHVLFR
        +PENA E+CPG ES  AGK+DAC+GCPNQS+CA  PKGPDP   L R
Subjt:  IPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDPVHVLFR

P0CO89 Cytosolic Fe-S cluster assembly factor NBP351.6e-1268.09Show/hide
Query:  IPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDPVHVLFR
        +PENA E+CPG ES  AGK+DAC+GCPNQS+CA  PKGPDP   L R
Subjt:  IPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDPVHVLFR

Q0CVD6 Cytosolic Fe-S cluster assembly factor nbp351.0e-1185.71Show/hide
Query:  ENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        E+CPGPESE AGK DAC GCPNQ+ICATAPKGPDP
Subjt:  ENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

Q1EAU8 Cytosolic Fe-S cluster assembly factor NBP351.4e-1185.71Show/hide
Query:  ENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        E+CPGPESE AGK DAC GCPNQSICA+APKGPDP
Subjt:  ENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

Q8H1Q2 Cytosolic Fe-S cluster assembly factor NBP354.1e-1680.43Show/hide
Query:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        MEN +IPE+ANE+CPGP+SESAGKSD+C GCPNQ  CATAPKGPDP
Subjt:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP

Arabidopsis top hitse value%identityAlignment
AT5G50960.1 nucleotide binding protein 352.9e-1780.43Show/hide
Query:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP
        MEN +IPE+ANE+CPGP+SESAGKSD+C GCPNQ  CATAPKGPDP
Subjt:  MENSEIPENANENCPGPESESAGKSDACQGCPNQSICATAPKGPDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATTAGCTTTTGGCTTCAATTGGTCGATACCCATTACACTTGGGATTTTATATCGAAGTTTTCAGGTGTTAAGAGTCGCAGTCATCAGGTTGAAAGTTTTTACGC
CCTGTCCAGGGAAGTAAAGGTTGGTTTTTGGCGATATTGGGGTACGTGTTTGTTTTTGAAGCCCTTTGGAGTAGACATCAAATTCACAAAAAGCTCATCAGCATTGAAGA
AGAAGACACAGCTAATGGAGAATAGCGAAATCCCTGAAAACGCCAATGAAAATTGCCCGGGTCCTGAGTCGGAGTCAGCAGGGAAATCAGATGCCTGTCAAGGATGTCCC
AACCAATCCATTTGTGCTACTGCACCTAAAGGCCCTGACCCAGTTCATGTGCTTTTCCGGCTGATTGGTTTATTCTGTTTAGATAGTTTCTTAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCATTAGCTTTTGGCTTCAATTGGTCGATACCCATTACACTTGGGATTTTATATCGAAGTTTTCAGGTGTTAAGAGTCGCAGTCATCAGGTTGAAAGTTTTTACGC
CCTGTCCAGGGAAGTAAAGGTTGGTTTTTGGCGATATTGGGGTACGTGTTTGTTTTTGAAGCCCTTTGGAGTAGACATCAAATTCACAAAAAGCTCATCAGCATTGAAGA
AGAAGACACAGCTAATGGAGAATAGCGAAATCCCTGAAAACGCCAATGAAAATTGCCCGGGTCCTGAGTCGGAGTCAGCAGGGAAATCAGATGCCTGTCAAGGATGTCCC
AACCAATCCATTTGTGCTACTGCACCTAAAGGCCCTGACCCAGTTCATGTGCTTTTCCGGCTGATTGGTTTATTCTGTTTAGATAGTTTCTTAAACTAA
Protein sequenceShow/hide protein sequence
MPISFWLQLVDTHYTWDFISKFSGVKSRSHQVESFYALSREVKVGFWRYWGTCLFLKPFGVDIKFTKSSSALKKKTQLMENSEIPENANENCPGPESESAGKSDACQGCP
NQSICATAPKGPDPVHVLFRLIGLFCLDSFLN