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CSPI04G20930 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G20930
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationChr4:19331250..19331874
RNA-Seq ExpressionCSPI04G20930
SyntenyCSPI04G20930
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]5.4e-2698.53Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFAS FRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSR

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]1.1e-6098.48Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWILDILSSLLYMEVIFLFGIISDDGFSF
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWILDILSSLLYMEVIFLFGIISDDGFSF
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWILDILSSLLYMEVIFLFGIISDDGFSF

Query:  RFVSFFFDSVSDLLKALDCLDSLFLFFIFLLL
        RFVSFFFDSVSDLLKALDCLDSLFLFFIFL++
Subjt:  RFVSFFFDSVSDLLKALDCLDSLFLFFIFLLL

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2966.13Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWILDILSSLLYMEVIFLFGIISDDGFSF
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS+FRVS SR               +   F   II DDGFSF
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWILDILSSLLYMEVIFLFGIISDDGFSF

Query:  RFVSFFFDSVSDLLKALDCLDSLF
        RF+SFF DSVSDL +AL+  +SLF
Subjt:  RFVSFFFDSVSDLLKALDCLDSLF

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2281.33Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWIL
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL  HTA HT RAYPRFRLAFSR+F SVFRVSYSR+ G  +L
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWIL

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2281.33Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWIL
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL  HTA HT RAYPRFRLAFSR+F SVFRVSYSR+ G  +L
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWIL

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein1.6e-6388.05Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWILDILSSLLYMEVIFLFGIISDDGFSF
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWILDILSSLLYMEVIFLFGIISDDGFSF
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWILDILSSLLYMEVIFLFGIISDDGFSF

Query:  RFVSFFFDSVSDLLKALDCLDSLFLFFIFL-------------------LLPNAEEART
        RFVSFFFDSVSDLLKALDCLDSLFLFFIFL                   LLPNAEEART
Subjt:  RFVSFFFDSVSDLLKALDCLDSLFLFFIFL-------------------LLPNAEEART

A0A2C9V7E1 Uncharacterized protein2.6e-1878.46Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+ FVET+EDLL  TA +++RAYPRFRLAFSR+F+++FR+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVS

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 12.6e-2698.53Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFAS FRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSR

A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X17.6e-1875.38Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+L  T ++T+RAYPR RL FSR+F S+F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVS

A0A6P6AMC9 uncharacterized protein LOC111310902 isoform X27.6e-1875.38Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+L  T ++T+RAYPR RL FSR+F S+F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein1.6e-1254.17Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGS
        MLQLFF +AFSA PLTLY+PPIR L++FVET+E++     +++ R +PR R+A+SRL    F  S SR L S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTGCCTTTAACGCTCTATGTGCCGCCGATTCGTAGCCTTAGTTTGTTCGTTGAAACGCTAGAAGATCTTCTCCA
TCACACCGCCATTCATACCATCAGAGCTTATCCTCGCTTTCGCCTTGCCTTCTCTCGCCTCTTCGCCTCCGTTTTCCGTGTTTCTTACTCCAGGAATCTTGGATCTTGGA
TCTTGGATATTCTCTCTTCGTTGTTGTATATGGAAGTGATATTTTTATTTGGAATCATTTCTGATGATGGGTTTTCGTTTCGTTTCGTTTCCTTCTTCTTTGATTCTGTT
TCCGATCTCCTCAAAGCTTTGGATTGTTTAGATTCTCTGTTTTTGTTCTTCATTTTTCTTCTTTTACCAAACGCGGAAGAGGCAAGAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTGCCTTTAACGCTCTATGTGCCGCCGATTCGTAGCCTTAGTTTGTTCGTTGAAACGCTAGAAGATCTTCTCCA
TCACACCGCCATTCATACCATCAGAGCTTATCCTCGCTTTCGCCTTGCCTTCTCTCGCCTCTTCGCCTCCGTTTTCCGTGTTTCTTACTCCAGGAATCTTGGATCTTGGA
TCTTGGATATTCTCTCTTCGTTGTTGTATATGGAAGTGATATTTTTATTTGGAATCATTTCTGATGATGGGTTTTCGTTTCGTTTCGTTTCCTTCTTCTTTGATTCTGTT
TCCGATCTCCTCAAAGCTTTGGATTGTTTAGATTCTCTGTTTTTGTTCTTCATTTTTCTTCTTTTACCAAACGCGGAAGAGGCAAGAACATAA
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFASVFRVSYSRNLGSWILDILSSLLYMEVIFLFGIISDDGFSFRFVSFFFDSV
SDLLKALDCLDSLFLFFIFLLLPNAEEART