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CSPI04G20980 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G20980
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCACTA en-spm transposon protein
Genome locationChr4:19397655..19398135
RNA-Seq ExpressionCSPI04G20980
SyntenyCSPI04G20980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039165.1 (R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa]7.6e-0643.68Show/hide
Query:  DYFLNL-DVLDNAAGSSLVGDTSVDP-SHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRFILIKGCRSRI
        D +L L D  +N+ GSS + +TS  P S  +PTS   R +++SQN+++EQY+QQ+G+IPISI  GG + +S  A RF     C +R+
Subjt:  DYFLNL-DVLDNAAGSSLVGDTSVDP-SHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRFILIKGCRSRI

KAA0055903.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]8.9e-0734.17Show/hide
Query:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRFILIKGCRSRIPLFVR
        +FP    E + F  L+   +N  GSS VGDTS  P    PT   RR Q +S+N+++++++QQNG+IPISI   G +P+S H  R+       + I +  R
Subjt:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRFILIKGCRSRIPLFVR

Query:  SVLDLYSLCVRIVMEATNCS
            ++ L   + +++T+ S
Subjt:  SVLDLYSLCVRIVMEATNCS

KAA0056283.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.4e-0744.05Show/hide
Query:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPR
        +FP  + E D +LNLD  LDN  GSS VG+T +D    TPT   RR +++ +N+ +E Y+ QNG+ PI   LGG +P+  H  R
Subjt:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPR

TYK05216.1 (R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa]2.4e-0744.05Show/hide
Query:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPR
        +FP  + E D +LNLD  LDN  GSS VG+T +D    TPT   RR +++ +N+ +E Y+ QNG+ PI   LGG +P+  H  R
Subjt:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPR

TYK24203.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.2e-0644.19Show/hide
Query:  SNFPCTMQEE-DYFLNLDVLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRF
        S+FP   QE  D FL  + + N      VGDTS +P    PT   RR +++SQN+++E+YIQ+NG+IPISI     +P+S H  RF
Subjt:  SNFPCTMQEE-DYFLNLDVLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRF

TrEMBL top hitse value%identityAlignment
A0A5A7UJ01 CACTA en-spm transposon protein4.3e-0734.17Show/hide
Query:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRFILIKGCRSRIPLFVR
        +FP    E + F  L+   +N  GSS VGDTS  P    PT   RR Q +S+N+++++++QQNG+IPISI   G +P+S H  R+       + I +  R
Subjt:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRFILIKGCRSRIPLFVR

Query:  SVLDLYSLCVRIVMEATNCS
            ++ L   + +++T+ S
Subjt:  SVLDLYSLCVRIVMEATNCS

A0A5A7UK18 CACTA en-spm transposon protein1.1e-0744.05Show/hide
Query:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPR
        +FP  + E D +LNLD  LDN  GSS VG+T +D    TPT   RR +++ +N+ +E Y+ QNG+ PI   LGG +P+  H  R
Subjt:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPR

A0A5D3C470 (R)-mandelonitrile lyase 1-like1.1e-0744.05Show/hide
Query:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPR
        +FP  + E D +LNLD  LDN  GSS VG+T +D    TPT   RR +++ +N+ +E Y+ QNG+ PI   LGG +P+  H  R
Subjt:  NFPCTMQEEDYFLNLD-VLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPR

A0A5D3DKP3 CACTA en-spm transposon protein5.7e-0744.19Show/hide
Query:  SNFPCTMQEE-DYFLNLDVLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRF
        S+FP   QE  D FL  + + N      VGDTS +P    PT   RR +++SQN+++E+YIQ+NG+IPISI     +P+S H  RF
Subjt:  SNFPCTMQEE-DYFLNLDVLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRF

A0A5D3DT41 (R)-mandelonitrile lyase 1-like3.7e-0643.68Show/hide
Query:  DYFLNL-DVLDNAAGSSLVGDTSVDP-SHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRFILIKGCRSRI
        D +L L D  +N+ GSS + +TS  P S  +PTS   R +++SQN+++EQY+QQ+G+IPISI  GG + +S  A RF     C +R+
Subjt:  DYFLNL-DVLDNAAGSSLVGDTSVDP-SHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRFILIKGCRSRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCTAACTTTCCATGCACGATGCAAGAGGAAGACTATTTTCTTAATCTAGACGTGTTGGATAACGCGGCCGGTTCGTCGTTGGTAGGCGACACTTCAGTAGATCC
CTCTCATTCGACTCCCACTTCCATTGCGAGGAGAGTACAACGAAATTCTCAAAACATAGATGTCGAGCAATACATACAGCAGAATGGGAGAATTCCCATTTCAATCCCCC
TTGGAGGGGCCAGACCTGTCTCAACACACGCCCCTCGTTTCATATTGATCAAAGGTTGTCGATCGCGGATTCCATTGTTTGTGAGGTCCGTGCTGGATTTATATTCATTA
TGTGTGAGGATTGTAATGGAAGCCACAAATTGTTCACATAGACAAGTGGATTCAAATCAACGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCTAACTTTCCATGCACGATGCAAGAGGAAGACTATTTTCTTAATCTAGACGTGTTGGATAACGCGGCCGGTTCGTCGTTGGTAGGCGACACTTCAGTAGATCC
CTCTCATTCGACTCCCACTTCCATTGCGAGGAGAGTACAACGAAATTCTCAAAACATAGATGTCGAGCAATACATACAGCAGAATGGGAGAATTCCCATTTCAATCCCCC
TTGGAGGGGCCAGACCTGTCTCAACACACGCCCCTCGTTTCATATTGATCAAAGGTTGTCGATCGCGGATTCCATTGTTTGTGAGGTCCGTGCTGGATTTATATTCATTA
TGTGTGAGGATTGTAATGGAAGCCACAAATTGTTCACATAGACAAGTGGATTCAAATCAACGATGA
Protein sequenceShow/hide protein sequence
MTSNFPCTMQEEDYFLNLDVLDNAAGSSLVGDTSVDPSHSTPTSIARRVQRNSQNIDVEQYIQQNGRIPISIPLGGARPVSTHAPRFILIKGCRSRIPLFVRSVLDLYSL
CVRIVMEATNCSHRQVDSNQR