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CSPI04G21020 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G21020
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description40S ribosomal protein S25
Genome locationChr4:19453426..19457435
RNA-Seq ExpressionCSPI04G21020
SyntenyCSPI04G21020
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR004977 - Ribosomal protein S25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144662.1 40S ribosomal protein S25-2 [Cucumis sativus]1.7e-48100Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_004291591.1 PREDICTED: 40S ribosomal protein S25-2 [Fragaria vesca subsp. vesca]1.6e-4694.44Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL+SEAPKFKLITP+I+SDRLRINGSLARRAIKDLMARGSIR+ISAH+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_008442240.1 PREDICTED: 40S ribosomal protein S25-2 [Cucumis melo]1.5e-4797.22Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL+SEAPKFKLITP+I+SDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_008456601.1 PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]2.1e-4693.52Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL+SE PK+KL+TP+I+SDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_022142384.1 40S ribosomal protein S25-2 [Momordica charantia]7.3e-4795.37Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKL+SEAPK+KLITP+I+SDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

TrEMBL top hitse value%identityAlignment
A0A0A0KYW1 40S ribosomal protein S258.4e-49100Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A1S3B608 40S ribosomal protein S257.1e-4897.22Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL+SEAPKFKLITP+I+SDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A5D3CKR9 40S ribosomal protein S251.0e-4693.52Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL+SE PK+KL+TP+I+SDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1BYI5 40S ribosomal protein S251.0e-4693.52Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL+SE PK+KL+TP+I+SDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1CLE7 40S ribosomal protein S253.5e-4795.37Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKL+SEAPK+KLITP+I+SDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

SwissProt top hitse value%identityAlignment
P46301 40S ribosomal protein S251.9e-4586.11Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKL+SEAPK+KLITP+++SDRLRI+GSLAR+AI+DLMARGSIR++SAH+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q8GYL5 40S ribosomal protein S25-32.9e-4688.79Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SEAPKFKLITP+I+SDRLRINGSLARRAI++LMA+G+IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

Q9SIK2 40S ribosomal protein S25-23.4e-4788.89Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL++EAPKFKLITP+I+SDR+RINGSLARRAI++LMA+G IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q9SIW5 40S ribosomal protein S25-12.7e-4486.79Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SEAPKFKLITP+I+SDRLRINGSLAR+AI+DLM +G+IR++S HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRAT
        I TRAT
Subjt:  IYTRAT

Q9T029 40S ribosomal protein S25-43.8e-4687.04Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL++EAPKFKLITP+I+SDR+RINGSLARRAI++LMA+G IR+++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Arabidopsis top hitse value%identityAlignment
AT2G21580.1 Ribosomal protein S25 family protein2.4e-4888.89Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL++EAPKFKLITP+I+SDR+RINGSLARRAI++LMA+G IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT2G21580.2 Ribosomal protein S25 family protein1.7e-4687.96Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKL++EAPKFKLITP+I+SDR+RINGSLARRAI++LMA+G IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G34555.1 Ribosomal protein S25 family protein2.0e-4788.79Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SEAPKFKLITP+I+SDRLRINGSLARRAI++LMA+G+IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

AT4G39200.1 Ribosomal protein S25 family protein2.7e-4787.04Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL++EAPKFKLITP+I+SDR+RINGSLARRAI++LMA+G IR+++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G39200.2 Ribosomal protein S25 family protein1.9e-4586.11Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKL++EAPKFKLITP+I+SDR+RINGSLARRAI++LMA+G IR+++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCTAAGAAGGACAAGGCTCCTCCTCCATCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGT
GAACAACATGGTATTGTTTGATCAGGGAACCTATGACAAGCTTGTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCTGCTATCATTTCAGACAGATTAAGGATCAATG
GATCATTGGCACGTCGGGCGATCAAGGATTTAATGGCCAGAGGTTCTATTAGGCTCATATCTGCTCATTCTAGCCAGCAAATATACACCAGAGCCACAAACACATGA
mRNA sequenceShow/hide mRNA sequence
CTAGATTCCACTAGGCAACACGAGTAGTTTGTACAGTGAGAAAAAAAAGCAGAAAAGAAACCATATTAACCCTAATTGACCAATAGTTATTAACCGAGAAACCCTACACT
CCTTAAAATATATTAGTTTTTCTCCACATCCACTCGGAGCTCCAGCCGGCAGCCACACCAACCTTCTGCCTTCGTCCTCCATCCAAATTCTCAGCCCTAAATCTACTCAA
CATGGCACCTAAGAAGGACAAGGCTCCTCCTCCATCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGG
TGAACAACATGGTATTGTTTGATCAGGGAACCTATGACAAGCTTGTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCTGCTATCATTTCAGACAGATTAAGGATCAAT
GGATCATTGGCACGTCGGGCGATCAAGGATTTAATGGCCAGAGGTTCTATTAGGCTCATATCTGCTCATTCTAGCCAGCAAATATACACCAGAGCCACAAACACATGATC
AAAAAGTTGCCATTTAAAAGAGGAACATCTTGGTTTTCTTTGCATCTCGTCAGGAACTAATATCTATGATTTTGAATATTTACATGTTTGCATTTAGAACTGGATGAATT
ATTTGCACTGCTTGATCGGATATATTTTTATATAATTTGAATTTTTGCTTTCATTTCTTTGAGTTTTTCTAGCAAATGAGCAAGCATGTACTATTGATTTTGGAATTAGA
GATTTGTGCTCACTACTTTGTCGATTGAAGAAAAAAATACCGAAACATCTTATGTAAAGTGTAGTATGGCACTATTTAATGGCTCATTGGTTTATCAAATCCTTCTCCAT
TTTGACCAACG
Protein sequenceShow/hide protein sequence
MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQIYTRATNT