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CSPI04G21070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G21070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein trichome birefringence-like 6
Genome locationChr4:19501328..19501957
RNA-Seq ExpressionCSPI04G21070
SyntenyCSPI04G21070
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016413 - O-acetyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044416.1 protein trichome birefringence-like 6 [Cucumis melo var. makuwa]5.3e-2286.76Show/hide
Query:  FSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        FSRTD VTTHFVDAHLRKSEN STH KK ADNVTGYGGIPVSGE RREND+EEGKND   DGNTTEVR
Subjt:  FSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

XP_004152223.1 protein trichome birefringence-like 6 [Cucumis sativus]8.2e-2383.33Show/hide
Query:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        F   FSRTD VTTHFVDAHLRKSEN STH KKP DNVTGYGGIPVSGE RRENDMEEG+ND   DGNTTEVR
Subjt:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

XP_016901454.1 PREDICTED: LOW QUALITY PROTEIN: protein trichome birefringence-like 6 [Cucumis melo]5.3e-2286.76Show/hide
Query:  FSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        FSRTD VTTHFVDAHLRKSEN STH KK ADNVTGYGGIPVSGE RREND+EEGKND   DGNTTEVR
Subjt:  FSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

XP_022934386.1 protein trichome birefringence-like 6 [Cucurbita moschata]5.9e-1358.33Show/hide
Query:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        F   FSRTD   TH +D H RKSEN S H K P +N+TGYGGI + GE R EN  EEGK D   DGNTT +R
Subjt:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

XP_038903005.1 protein trichome birefringence-like 6 [Benincasa hispida]7.9e-1872.22Show/hide
Query:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        F   FSRTD +TTH VDAHLRKSEN STH KKP DNVTGYGGIPV  E R+E+  EEG+ND   DGNTTEVR
Subjt:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

TrEMBL top hitse value%identityAlignment
A0A0A0KTA4 PMR5N domain-containing protein4.0e-2383.33Show/hide
Query:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        F   FSRTD VTTHFVDAHLRKSEN STH KKP DNVTGYGGIPVSGE RRENDMEEG+ND   DGNTTEVR
Subjt:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

A0A0A0KYW5 Uncharacterized protein2.0e-3896.39Show/hide
Query:  LITRESSDDEHFREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        ++TRESSDDEHFREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGG PVSGEARRENDMEEGKNDSDTDGNTTEVR
Subjt:  LITRESSDDEHFREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

A0A1S4DZR8 LOW QUALITY PROTEIN: protein trichome birefringence-like 62.6e-2286.76Show/hide
Query:  FSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        FSRTD VTTHFVDAHLRKSEN STH KK ADNVTGYGGIPVSGE RREND+EEGKND   DGNTTEVR
Subjt:  FSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

A0A5A7TQN4 Protein trichome birefringence-like 62.6e-2286.76Show/hide
Query:  FSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        FSRTD VTTHFVDAHLRKSEN STH KK ADNVTGYGGIPVSGE RREND+EEGKND   DGNTTEVR
Subjt:  FSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

A0A6J1J7L3 protein trichome birefringence-like 62.9e-1359.72Show/hide
Query:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR
        F   FSRTD   TH VD H RKSEN S H K P +N+TGYGGI + GE R EN  EEGK D   DGNTT +R
Subjt:  FREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTTGGTTATCACTTTCACAATCTCATCACCCGTGAATCTTCAGACGATGAACACTTTCGGGAGGAATTTTCAAGAACTGATGTGGTTACTACTCATTTCGTCGA
TGCCCATTTGAGGAAATCAGAAAATCATTCTACCCATTGGAAGAAACCAGCTGACAATGTTACTGGGTATGGTGGGATTCCAGTTTCCGGCGAGGCGAGGAGAGAGAACG
ACATGGAAGAAGGGAAGAATGACAGCGACACTGATGGGAATACCACTGAAGTTCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCTTGGTTATCACTTTCACAATCTCATCACCCGTGAATCTTCAGACGATGAACACTTTCGGGAGGAATTTTCAAGAACTGATGTGGTTACTACTCATTTCGTCGA
TGCCCATTTGAGGAAATCAGAAAATCATTCTACCCATTGGAAGAAACCAGCTGACAATGTTACTGGGTATGGTGGGATTCCAGTTTCCGGCGAGGCGAGGAGAGAGAACG
ACATGGAAGAAGGGAAGAATGACAGCGACACTGATGGGAATACCACTGAAGTTCGGTAGCGGCGGCGAGAGTTTGATTAAGGAAATTGAAGCGGAATAGGACTGAGAAGA
AGGATTTGAAAATTTCTTTGGAGAAATTGGAATCCTCGAACGAGATAGTGAGAACAAAATCTCAACAGTACGATTTAACAAAAAAGGAAGTGGGTTTATGATGAGAGTTT
CCCAATTTTCTCCAATAGTTTGTGTATTTTTTTTAACATAAAGTATACAATTTCAATTTTGTTTATATTGAG
Protein sequenceShow/hide protein sequence
MILGYHFHNLITRESSDDEHFREEFSRTDVVTTHFVDAHLRKSENHSTHWKKPADNVTGYGGIPVSGEARRENDMEEGKNDSDTDGNTTEVR