CuGenDBv2

Gene ID	CSPI04G21190
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein cornichon homolog 1 isoform X2
Genome location	Chr4:19631179..19632587
RNA-Seq Expression	CSPI04G21190
Synteny	CSPI04G21190
Gene Ontology terms	GO:0016192 - vesicle-mediated transport (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR003377 - Cornichon

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144657.1 protein cornichon homolog 1 isoform X2 [Cucumis sativus]

9.2e-22

100

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

XP_008442270.1 PREDICTED: protein cornichon homolog 1 isoform X2 [Cucumis melo]

4.5e-21

96.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFL+VIFRLTLSAFNSLSDED+VLHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

XP_022928681.1 protein cornichon homolog 1-like isoform X2 [Cucurbita moschata]

5.9e-21

96.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

XP_023543606.1 protein cornichon homolog 1-like isoform X2 [Cucurbita pepo subsp. pepo]

5.9e-21

96.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

XP_038883916.1 protein cornichon homolog 1 isoform X2 [Benincasa hispida]

1.2e-21

98.33

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFL+VIFRLTLSAFNSLSDEDDVLHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4V0 protein cornichon homolog 1 isoform X2

2.2e-21

96.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFL+VIFRLTLSAFNSLSDED+VLHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

A0A6J1DFC9 protein cornichon homolog 1-like isoform X2

1.9e-20

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLKREHLIDVTEVFR LKREKYFRL KLIFYLL+FL+VIFRLTLSAFNSLSDEDD++HLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

A0A6J1EKZ6 protein cornichon homolog 1-like isoform X2

2.9e-21

96.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

A0A6J1HS45 protein cornichon homolog 1-like isoform X2

3.8e-21

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDD+LHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

A0A6J1HTX3 protein cornichon homolog 1-like isoform X1

1.9e-20

93.33

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        FLKREHLIDVTEVF+ LKREKYFR AKLIFYLLLFLVVIFRLTLSAFN+LSDEDDVLHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

SwissProt top hits

e value

%identity

Alignment

Q9C7D7 Protein cornichon homolog 1

9.9e-11

56.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        + +R +LIDVTEVFR +  EK  R  KL FY+ LF++V+FRLTLSA  S +++DD+LHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

Arabidopsis top hits

e value

%identity

Alignment

AT3G12180.1 Cornichon family protein

7.0e-12

56.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF
        + +R +LIDVTEVFR +  EK  R  KL FY+ LF++V+FRLTLSA  S +++DD+LHLF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

Sequences

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CDS sequence

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ATGACATGTATTATTCGGTTACAATGTCTCAGATTTTTGAAGAGGGAGCACCTTATTGATGTCACCGAGGTATTTAGAGCTCTTAAGCGTGAGAAGTATTTCCGTTTGGC
CAAGCTTATCTTCTACTTGCTTCTTTTCCTCGTAGTAATTTTCAGGCTTACTTTGTCTGCATTCAACTCCTTATCTGACGAAGACGATGTCCTACATTTATTTTGA

mRNA sequence

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TATTTTTTTTCTTGGTGTGTTTATGACATGTATTATTCGGTTACAATGTCTCAGATTTTTGAAGAGGGAGCACCTTATTGATGTCACCGAGGTATTTAGAGCTCTTAAGC
GTGAGAAGTATTTCCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTTTTCCTCGTAGTAATTTTCAGGCTTACTTTGTCTGCATTCAACTCCTTATCTGACGAAGACGAT
GTCCTACATTTATTTTGATTGCCATTTTGATATCCGAAGTTTGTATTACGGGTTCTATCGTGCATCGGGTTGATATTTATGTGGGAATTACACGAAGGGAATGAATTTGG
ACTCAGCAACTTCAAACACATTCAAACAGGTTTTCTCGATTCCCATTCTATAGTTTGGTAGGCTTCAGTAGCAATCTCATTGACTTACACCTAAGGAATTCTTGTATGTA
GAAGATAGCATTGTAGGCATATTATGTGATTTGATTTGTTTTGGTACCTTCCTTAACTCACTGCTAAGTACTGCTAAGTTGAGGGACCTTCAAGATTAGGGTTTCATATT
TTATCATTTTTGGAATATCAACTCGTTTCAAGTTTTAGTGTTTTTGTAAGGATTGAAATGATTTTCATCATTCAATACCTAACAATTGTATTAAGTGTTGTTCTCTTCAA
AGGATACATTTTTACTAACATTGTAAACTATTTTTAGGGCTTGT

Protein sequence

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MTCIIRLQCLRFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF

CSPI04G21190 (gene) of Cucumber (PI 183967) v1 genome