; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G21420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G21420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionexosome complex component RRP4 homolog
Genome locationChr4:19915193..19920926
RNA-Seq ExpressionCSPI04G21420
SyntenyCSPI04G21420
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041865.1 exosome complex component RRP4-like protein isoform X2 [Cucumis melo var. makuwa]1.7e-16795.12Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIIVGRV
        M+GLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR YKPEVGDI+VGRV
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIIVGRV

Query:  TEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        TEVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL
Subjt:  TEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        +QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKRG
        VHEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKRG

XP_008442058.1 PREDICTED: exosome complex component RRP4 homolog isoform X1 [Cucumis melo]2.0e-17195.18Show/hide
Query:  QCSSNMKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDII
        QCSS+M+GLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDI+
Subjt:  QCSSNMKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDII

Query:  VGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQH
        VGRVTEVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS
        FHHL+QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
        LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG

XP_008442061.1 PREDICTED: exosome complex component RRP4 homolog isoform X2 [Cucumis melo]7.0e-16995.41Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        M+GLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL+
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

XP_031740749.1 exosome complex component RRP4 homolog [Cucumis sativus]6.1e-18199.69Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

XP_038882865.1 exosome complex component RRP4 homolog isoform X2 [Benincasa hispida]1.4e-16491.16Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        M+GLQ+SLNHTQKIRL+RAQERL+SLSSK NSDASV+VADTIPLNYEDGVLKGHGTLDLNGEV+A+ICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTV  YL+KRRKQHFHHLE
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        QYGIDLILGCNGFIWIGEHVDP   D MI+DQ++K EQKG KFEGTF NQVQ+ VYTPLETRQNICRTANAIRVLS LGFIMTVEVIMEIV+LSIS+NID
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKRG
        VHEMLGSEFCVLTAEKEVERR+SSKKRG
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKRG

TrEMBL top hitse value%identityAlignment
A0A1S3B4T9 exosome complex component RRP4 homolog isoform X23.4e-16995.41Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        M+GLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL+
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

A0A1S3B5H2 exosome complex component RRP4 homolog isoform X19.5e-17295.18Show/hide
Query:  QCSSNMKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDII
        QCSS+M+GLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDI+
Subjt:  QCSSNMKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDII

Query:  VGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQH
        VGRVTEVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS
        FHHL+QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
        LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG

A0A5A7TKA1 Exosome complex component RRP4-like protein isoform X28.4e-16895.12Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIIVGRV
        M+GLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR YKPEVGDI+VGRV
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRAR-YKPEVGDIIVGRV

Query:  TEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        TEVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL
Subjt:  TEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        +QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKRG
        VHEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKRG

A0A5D3C2G3 Exosome complex component RRP4-like protein isoform X23.4e-16995.41Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        M+GLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLL VSPYLIKRRKQHFHHL+
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPK  D MIED VDKPEQK  KFEGT    VQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV

Query:  HEMLGSEFCVLTAEKEVERRSSSKKRG
        HEMLGSEFCVLTAEKEVERRSSSKKRG
Subjt:  HEMLGSEFCVLTAEKEVERRSSSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog8.9e-16289.94Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        M+GLQ+SLN TQKIRL+RA E L+S+SSK NSDASVVVADTIPLNYEDGVLKGHGTLDL GEVVA+ICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE
        EVAPKRWRLDINY QDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQLLTVSPYL+KRRKQHFHHLE
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        QYGIDLILGCNGFIWIGEHVDP   D M+ED ++K EQKGSKFEG+FGNQVQE +YTPLETRQNICRTANAIRVLS LGFIM+VEVIME V+LSISLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQE-VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKRG
        VHEMLGSEFCVLTAEKE ERR+SSKKRG
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp41.1e-4441.47Show/hide
Query:  LKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT   +G + AS+ G V+RVNKLI V+ LR++Y PE+GD+I+G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGN
        ++ AEV+    DG + +  RS KYGKL  G  L V P L+ R K H + L   G+D+IL  NG++W+ +H + +         + + E++ S  E  + N
Subjt:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGN

Query:  QVQEV--YTPLE-TRQNICRTANAIRVL-----STLGFIMTVEVIMEIVNLSISLNID
        +  E+  YT L  +R +IC    A R L     S   F  +  V   + +L++  N+D
Subjt:  QVQEV--YTPLE-TRQNICRTANAIRVL-----STLGFIMTVEVIMEIVNLSISLNID

Q13868 Exosome complex component RRP43.0e-4550.73Show/hide
Query:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN
        ++RL  A++ L     +      VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDI+VGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN

Query:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIWI
Subjt:  GFIWI

Q2KID0 Exosome complex component RRP41.7e-4550.24Show/hide
Query:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN
        ++RL  A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDI+VGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN

Query:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIW+
Subjt:  GFIWI

Q8VBV3 Exosome complex component RRP41.6e-4650.23Show/hide
Query:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN
        ++RL +A++ L     + +    VV  DTI    + G ++GHGT     +++AS+ G VERVNKLI V+AL+ RY  EVGDI+VGR+TEV  KRW+++ N
Subjt:  KIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN

Query:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G L+ VSP L+KR+K HFH L   G  +ILG N
Subjt:  YCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI---GEHVD
        GFIWI    EH D
Subjt:  GFIWI---GEHVD

Q9ZVT7 Exosome complex component RRP4 homolog3.8e-11764.53Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        M+ LQL L+ TQK+R ERA ERL+SLSS  NSDASV+V D+IP+N++D  LKGHGT +++GE++A++CGVVERV+KL+YVR LRARYKPEVGDI+VGRV 
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        EVA KRWR+++N+ QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQLL V PYL+KR K HFH++
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        E  GIDLI+GCNGFIW+GEHV+       + D +   +QK  +   +     ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKR
        +H+MLGSEF V+ AE E ERR + +K+
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 42.7e-11864.53Show/hide
Query:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        M+ LQL L+ TQK+R ERA ERL+SLSS  NSDASV+V D+IP+N++D  LKGHGT +++GE++A++CGVVERV+KL+YVR LRARYKPEVGDI+VGRV 
Subjt:  MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL
        EVA KRWR+++N+ QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQLL V PYL+KR K HFH++
Subjt:  EVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID
        E  GIDLI+GCNGFIW+GEHV+       + D +   +QK  +   +     ++ + PLETRQ ICR  NAIRVLS LGF +T+EVIME VNLS S NID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID

Query:  VHEMLGSEFCVLTAEKEVERRSSSKKR
        +H+MLGSEF V+ AE E ERR + +K+
Subjt:  VHEMLGSEFCVLTAEKEVERRSSSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGAAGACAAAGACCCACAACAAAAACAAAGATCTAGTGAAAACTCACAGCAAAAACCCAGATTCACGTGAAGAGGAAGAGGAAAACCCAAATCTGACGAAGCA
AAAGACGTCGTGTAGAGGAAGACGAGAAAAGAGAGGAAAATCTACAGCCCTTCTCGTTCTCCTCTTTCTCCACGCACGCTGCCCTCCCTATTCACCTTCCAATTTCTTTT
TTTTCCGTCTGCCCATCACACCAGCCACCGCCGACCATTACGTCTTGGCCGCCGCAAGTCTCCGTGCATCATCTACACCGTGTCTGATAAGTCGACTGTCTGATTCTTCA
ACTGCCGCTCTCGTCCGTAGTTTCGAAAGGTTTCGCCGCTGCAGCCGCGTCTCCCTCACTCGTCAGAGTTCGCCGGAATTCCAAGAGCTTGCTGACGACGTCAACCATCT
CTCGCCATTCTTTAGCACGCTGATTCGCCCGTTACTTTCATTCTATTCCAACCGTCTTTCATCATCTTCTCAGTGTTCATCAAATATGAAAGGTTTACAACTTTCCTTGA
ATCATACCCAGAAGATTCGTCTTGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTCGAAGGGCAATTCTGATGCTTCTGTTGTAGTTGCCGATACTATTCCTCTCAAT
TACGAGGATGGTGTCCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTCATCTATGTACGTGC
CTTGCGTGCCAGATATAAACCGGAGGTTGGTGATATCATAGTGGGACGTGTTACAGAGGTTGCACCAAAACGTTGGAGATTGGATATAAATTATTGCCAAGATGCAGTTT
TGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGAAGGCGAACTGCCGTTGATGAACTCAACATGCGGAGCATTTTTGAAGAAAATGATGTCATTTGTGCCGAA
GTACGTGGTCTTCAGCATGATGGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGCAAGCTTGAACGTGGTCAGCTGCTCACAGTTTCTCCATATCTAATAAAGAGACG
CAAACAACACTTCCATCATTTGGAGCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTTGATCCCAAAGTGGTGGATACGATGA
TAGAGGATCAAGTTGATAAACCTGAACAAAAGGGTTCGAAATTTGAAGGAACTTTTGGCAACCAAGTGCAAGAAGTATATACTCCATTAGAGACACGACAGAATATCTGC
AGAACTGCAAATGCAATTCGAGTATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTATTTCTCTAAACATTGATGTGCACGA
AATGCTTGGCTCAGAGTTCTGTGTTCTCACGGCAGAAAAAGAGGTCGAACGACGTTCTTCGAGTAAGAAGAGGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGAAGACAAAGACCCACAACAAAAACAAAGATCTAGTGAAAACTCACAGCAAAAACCCAGATTCACGTGAAGAGGAAGAGGAAAACCCAAATCTGACGAAGCA
AAAGACGTCGTGTAGAGGAAGACGAGAAAAGAGAGGAAAATCTACAGCCCTTCTCGTTCTCCTCTTTCTCCACGCACGCTGCCCTCCCTATTCACCTTCCAATTTCTTTT
TTTTCCGTCTGCCCATCACACCAGCCACCGCCGACCATTACGTCTTGGCCGCCGCAAGTCTCCGTGCATCATCTACACCGTGTCTGATAAGTCGACTGTCTGATTCTTCA
ACTGCCGCTCTCGTCCGTAGTTTCGAAAGGTTTCGCCGCTGCAGCCGCGTCTCCCTCACTCGTCAGAGTTCGCCGGAATTCCAAGAGCTTGCTGACGACGTCAACCATCT
CTCGCCATTCTTTAGCACGCTGATTCGCCCGTTACTTTCATTCTATTCCAACCGTCTTTCATCATCTTCTCAGTGTTCATCAAATATGAAAGGTTTACAACTTTCCTTGA
ATCATACCCAGAAGATTCGTCTTGAAAGAGCCCAAGAAAGGCTTAAATCTCTCTCTTCGAAGGGCAATTCTGATGCTTCTGTTGTAGTTGCCGATACTATTCCTCTCAAT
TACGAGGATGGTGTCCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTGCCTCTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTCATCTATGTACGTGC
CTTGCGTGCCAGATATAAACCGGAGGTTGGTGATATCATAGTGGGACGTGTTACAGAGGTTGCACCAAAACGTTGGAGATTGGATATAAATTATTGCCAAGATGCAGTTT
TGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGAAGGCGAACTGCCGTTGATGAACTCAACATGCGGAGCATTTTTGAAGAAAATGATGTCATTTGTGCCGAA
GTACGTGGTCTTCAGCATGATGGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGCAAGCTTGAACGTGGTCAGCTGCTCACAGTTTCTCCATATCTAATAAAGAGACG
CAAACAACACTTCCATCATTTGGAGCAATATGGTATTGACCTAATACTTGGATGCAATGGTTTTATCTGGATTGGGGAGCATGTTGATCCCAAAGTGGTGGATACGATGA
TAGAGGATCAAGTTGATAAACCTGAACAAAAGGGTTCGAAATTTGAAGGAACTTTTGGCAACCAAGTGCAAGAAGTATATACTCCATTAGAGACACGACAGAATATCTGC
AGAACTGCAAATGCAATTCGAGTATTGTCTACCTTAGGTTTCATAATGACAGTAGAAGTCATCATGGAGATAGTTAATCTAAGTATTTCTCTAAACATTGATGTGCACGA
AATGCTTGGCTCAGAGTTCTGTGTTCTCACGGCAGAAAAAGAGGTCGAACGACGTTCTTCGAGTAAGAAGAGGGGGTAA
Protein sequenceShow/hide protein sequence
MKRKTKTHNKNKDLVKTHSKNPDSREEEEENPNLTKQKTSCRGRREKRGKSTALLVLLFLHARCPPYSPSNFFFFRLPITPATADHYVLAAASLRASSTPCLISRLSDSS
TAALVRSFERFRRCSRVSLTRQSSPEFQELADDVNHLSPFFSTLIRPLLSFYSNRLSSSSQCSSNMKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLN
YEDGVLKGHGTLDLNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYCQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAE
VRGLQHDGLHLQARSQKYGKLERGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLETRQNIC
RTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDVHEMLGSEFCVLTAEKEVERRSSSKKRG