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CSPI04G21520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G21520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionATP-dependent DNA helicase
Genome locationChr4:19996823..19997344
RNA-Seq ExpressionCSPI04G21520
SyntenyCSPI04G21520
Gene Ontology termsNA
InterPro domainsIPR025476 - Helitron helicase-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012829391.1 PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata]1.5e-6267.63Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ
        MYIKLETTRLD+Y+  QS +RSELYQGI++ +  GETRG +VGKRVVLP++FIGGPRDMRRRYLDA+ L+Q +GKP+LFITMTCN E KEI+E L +GQ+
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ

Query:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
        + D+PDLT RVFR KL DLKDQ+  KEIFGKV   V+VIEFQKR LPH H+LVI+K ++KIT+ D +D++V A
Subjt:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

XP_020243540.1 uncharacterized protein LOC109821791 [Asparagus officinalis]1.7e-6167.63Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ
        MYIKLETTRLD+++ +QS+IR+EL+QGI+D + AGE    +VGKR+VLPS+FIGGPRDMRRRYLDAM+L+Q +GKP+LFITMTCN E +EI E+L  GQ 
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ

Query:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
         +D+PDLT R+FR KL DLKDQ+  KEIFGKV   V+VIEFQKR LPH H+L+IL  D KIT +DQYDKYV A
Subjt:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

XP_020255467.1 uncharacterized protein LOC109832530 [Asparagus officinalis]1.2e-6265.9Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ
        MYIKLETTRLD+++ +QS+IR+E+YQGI+D L  GETRGD+VG+RV+LP++FIGGPRDMRRRY+DAM L+Q +GKP++FITMTCN + KEI++EL+ GQ 
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ

Query:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
        + D+PDLT RVFR KL DLKDQ+  K +FG+V   VYVIEFQKR LPH H+LVILK D KI   DQ++KY+ A
Subjt:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

XP_020266738.1 uncharacterized protein LOC109842248 [Asparagus officinalis]4.0e-6366.47Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ
        MY+KLETTRLDF++ QQS IR+ELYQGI+D + AGETRGD+VG RVVLP +FIGGPRDMRRRY+DAM L+Q YGKP+LFIT+TCN +  EIR EL+ GQ 
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ

Query:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
        + D+PDL+ RVFRGK+ DLKDQ+  +E+FGKVA  VYVIEFQKR LPH H+L+ILK ++K+ + D +DK++ A
Subjt:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

XP_022158322.1 uncharacterized protein LOC111024835 [Momordica charantia]2.3e-7984.97Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ
        MYIKLETTRLDFYK QQS IRSELYQGI+DV+NAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTL+QH+GKP+LFITMTCN+E KEIREEL+EGQ 
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ

Query:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
        S D+PDLT RVFRGKLMDLK+QI+ KEIFGKVA FVYVIEFQKR LPH+HML+ILK+DFKITN D YD YV A
Subjt:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

TrEMBL top hitse value%identityAlignment
A0A1S4BAU6 uncharacterized protein LOC1078063161.2e-6064.74Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ
        MYIKLET RL+F++ QQ+ +R E+ QGI+D + AGE RGDKVG+RV+LP++FIGGPRDMRRRY+DAM L+Q +GKP+LFITMTCN +  EI+E L EGQ 
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ

Query:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
        + D+PDL  RVFR KL DLKDQI  K+IFG VA  V+V+EFQKR LPH+H+L+IL++ +KIT ADQYDK++ A
Subjt:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

A0A5B7A9C3 ATP-dependent DNA helicase4.9e-6770.52Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ
        MYIKLETTRLD+Y+ QQS IR++LYQGI+D + AGETRG++VG+R+VLP++F+GGPRDMRRRYLDA+ L+Q +GKP+LFITMTCN + KE+++EL EGQ+
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ

Query:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
          D+PDLT RVFR KL DLKDQ+  K IFGKVA  VYVIEFQKR LPH HML+ILK ++KITNADQYDK+V A
Subjt:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

A0A6J1DWY2 uncharacterized protein LOC1110248351.1e-7984.97Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ
        MYIKLETTRLDFYK QQS IRSELYQGI+DV+NAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTL+QH+GKP+LFITMTCN+E KEIREEL+EGQ 
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ

Query:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
        S D+PDLT RVFRGKLMDLK+QI+ KEIFGKVA FVYVIEFQKR LPH+HML+ILK+DFKITN D YD YV A
Subjt:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

A0A6P5G2W9 ATP-dependent DNA helicase1.5e-6064.74Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ
        MYIK+E+TRLDF    Q++IR++LYQGI+D + +GE RG+ +GKR+VLPS+FIGGPRDMRRRYLDAM L+Q YGKP++F+TMTCN + +EIR EL  GQ 
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQ

Query:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
        + D+PDLT R+FR KL DLKDQ+  K IFG+VA  V+VIEFQKR LPH+H L+I++  FKITN DQYDK V A
Subjt:  SHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

A0A6P6V0H4 uncharacterized protein LOC1137160882.4e-6167.84Show/hide
Query:  IKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSH
        IKLETTRLDFY+ +Q +IR+ELYQGI+D + AGET G++VG+R+VLP  FIGGPRDMRRRYLDAM L++ +GKP+LFITMTCN E +EI+E L EGQ + 
Subjt:  IKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSH

Query:  DKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA
        D+PD   RVFR KL DLKDQ+  KEIFGK A  V+VIEFQKR LPH HML+ILK D+KIT+ DQ+DK+V A
Subjt:  DKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACATAAAGCTTGAAACAACGAGGCTTGATTTCTATAAAACACAACAATCACAAATTCGTTCGGAGTTGTATCAAGGGATCATTGATGTATTAAATGCAGGAGAAAC
GAGGGGAGACAAGGTTGGAAAACGTGTCGTTCTACCTTCAACTTTTATTGGTGGTCCTAGAGACATGCGGCGTCGATATTTAGATGCAATGACCTTAATACAACATTATG
GGAAGCCAAATCTTTTCATAACAATGACTTGCAATTCTGAAGGGAAGGAAATAAGAGAAGAACTTATGGAAGGACAACAATCTCACGATAAACCAGATCTAACTTTAAGA
GTATTTAGAGGAAAGTTAATGGACTTAAAAGACCAAATTATCCACAAGGAAATATTTGGAAAAGTTGCAGTGTTCGTATATGTGATTGAATTTCAAAAACGAGATCTTCC
ACACCTACACATGTTGGTAATATTGAAAAGAGATTTCAAGATTACTAATGCTGACCAATATGATAAATATGTTCGCGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACATAAAGCTTGAAACAACGAGGCTTGATTTCTATAAAACACAACAATCACAAATTCGTTCGGAGTTGTATCAAGGGATCATTGATGTATTAAATGCAGGAGAAAC
GAGGGGAGACAAGGTTGGAAAACGTGTCGTTCTACCTTCAACTTTTATTGGTGGTCCTAGAGACATGCGGCGTCGATATTTAGATGCAATGACCTTAATACAACATTATG
GGAAGCCAAATCTTTTCATAACAATGACTTGCAATTCTGAAGGGAAGGAAATAAGAGAAGAACTTATGGAAGGACAACAATCTCACGATAAACCAGATCTAACTTTAAGA
GTATTTAGAGGAAAGTTAATGGACTTAAAAGACCAAATTATCCACAAGGAAATATTTGGAAAAGTTGCAGTGTTCGTATATGTGATTGAATTTCAAAAACGAGATCTTCC
ACACCTACACATGTTGGTAATATTGAAAAGAGATTTCAAGATTACTAATGCTGACCAATATGATAAATATGTTCGCGCGTAA
Protein sequenceShow/hide protein sequence
MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLR
VFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA