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CSPI04G21950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G21950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCYSTM domain-containing protein
Genome locationChr4:20437009..20438370
RNA-Seq ExpressionCSPI04G21950
SyntenyCSPI04G21950
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032928.1 extensin-like [Cucumis melo var. makuwa]1.3e-2093.1Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKG
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTR+GGDFS   PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKG

KAF3972548.1 hypothetical protein CMV_003960 [Castanea mollissima]3.3e-1973.97Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA V YPPP ST P  Y APPPAGYPT++G  +S   P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF

KAG6591814.1 hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia]8.9e-2586.3Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS QPA V YPPP ST+PTSY+APPPAGYPTR+GGDFS   PVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_022137938.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]3.4e-2484.93Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA V YPPP ST P SY+APPPAGYPTR+GGDFS   PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_031739667.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus]5.2e-33100Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0L4C6 CYSTM domain-containing protein2.5e-33100Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A5D3DX21 Extensin-like6.4e-2193.1Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKG
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTR+GGDFS   PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKG

A0A6J1CBQ4 cysteine-rich and transmembrane domain-containing protein WIH2-like1.6e-2484.93Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA V YPPP ST P SY+APPPAGYPTR+GGDFS   PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2LG73 CYSTM domain-containing protein3.5e-1972.6Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA V YPPP ST P  Y APPPAGYPT++G  +S   P P ETKSRGDGFWKGCCAALCCCCV+DACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2R3F7 CYSTM domain-containing protein1.2e-1973.97Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDF--STPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA V YPPP STVP  Y APPPAGYPT++G  +  + P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDF--STPVPAETKSRGDGFWKGCCAALCCCCVLDACF

SwissProt top hitse value%identityAlignment
Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH26.9e-0440.68Show/hide
Query:  PPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        PP       Y   P  GYP      +  P   + +    GF +GC AALCCCC+LDACF
Subjt:  PPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

Arabidopsis top hitse value%identityAlignment
AT1G05340.1 unknown protein1.1e-1257.35Show/hide
Query:  QPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPV-PAETKSRGDGFWKGCCAALCCCCVLDACF
        Q AG N PPP ST     S PPP GYPT +    S      ETKS+GDGF+KGC AA+CCCC LD CF
Subjt:  QPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPV-PAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32190.1 unknown protein1.3e-1358.57Show/hide
Query:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G    PP ST P  Y  PPP GYPT +    +T  P ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32210.1 unknown protein2.2e-1358.57Show/hide
Query:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G    PP ST P  Y APPP GYPT +    +T    ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT3G22235.1 BEST Arabidopsis thaliana protein match is: pathogen and circadian controlled 1 (TAIR:AT3G22231.1)1.1e-0955.93Show/hide
Query:  PSSTVPTSYSAPPPAGYPTREGGDFSTPVPA-ETKSRGDGFWKGCCAALCCCCVLDACF
        PS T    Y++PPP GYPTR+      P  A ET S+G    +GCCAA+CCCCVLDACF
Subjt:  PSSTVPTSYSAPPPAGYPTREGGDFSTPVPA-ETKSRGDGFWKGCCAALCCCCVLDACF

AT3G22240.1 unknown protein1.0e-1555.56Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPA-ETKSRGDGFWKGCCAALCCCCVLDACF
        M+ ++   ++   PS T    Y++PPP GYPTR+      P  A ETKS+GDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPA-ETKSRGDGFWKGCCAALCCCCVLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTGCTCAACCTGCAGGTGTTAATTATCCTCCACCGTCGTCCACGGTGCCAACCTCTTATTCAGCTCCTCCACCGGCGGGGTATCCGACGAGAGAAGGCGGAGA
CTTCTCTACCCCTGTTCCGGCTGAAACAAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCATTGTGTTGCTGCTGTGTATTGGATGCCTGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATTTTTGTTTGAAAGAAAAGTAAATTGGAAGGGTACTTTTGTAATTTAAATGAAAAGAAAAAGAAATATAAAATATAATAAATAAACTCACTTTGTGCATAGTGTAAAAA
GCACCTCTTCTCTTTTGTCTTTATATATTCTCCCTTCCTTTCACGCGGTTTCGCCGCCCTTGGCCGGTCCCTCTCCGCCGCCTCCATATCTCTCCCCCACATATCCTCTC
TCTCCCTATATATATATATATAATCCGATCTCTCCTAAACCATCAAACTTAATTAAACCCCAAAGTTTAAAACAACAGAAAACATTTCTGATTTTCCTGACTTGTTCTCT
TGCAAATTAAACATGAGTTCTGCTCAACCTGCAGGTGTTAATTATCCTCCACCGTCGTCCACGGTGCCAACCTCTTATTCAGCTCCTCCACCGGCGGGGTATCCGACGAG
AGAAGGCGGAGACTTCTCTACCCCTGTTCCGGCTGAAACAAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCATTGTGTTGCTGCTGTGTATTGGATGCCT
GCTTCTAGAGAGAGATTATGGATATAATTAATCAGCATTATTGTTGTTATTTTAGTGTTTTTATTTTAATTTGTGAATTTTTGGATTAATCATGTCATGATGTTGTAATA
ATAAATTTGGGTGTTTGAAATTTCATGCTGATGAAACTATATTGGACTAATTCTGTGATCATATCCCATATATATATATGTATATTTGTTATTCTTTTTGGTGTGGAGTT
GTTGAGTTCTGTTTGTTTAAATATGCTGATGACACGTGGCATATTATTTTAATGAAACGTGTGCGTTGAGAAGATAAGGATGAGAAAGAGAG
Protein sequenceShow/hide protein sequence
MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF