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CSPI04G22030 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G22030
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationChr4:20490302..20490992
RNA-Seq ExpressionCSPI04G22030
SyntenyCSPI04G22030
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.9e-6366.81Show/hide
Query:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYWGVP---------
        M VAEYEKKYT+LSKYAT VI DE ERCK+FEEGLREEIRT VTACADW DFSK  E ALRVEKS+ ERKREREASKN+      ++   P         
Subjt:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYWGVP---------

Query:  ----SRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR
            SRG+FKSQYS SSFSKS SGGG QR S SSH I  T GSHV +S+ VVS S K SVCYN  Q  HY RD   LIP +NTI KTTSQT  QQ +TT 
Subjt:  ----SRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR

Query:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ
        T GEG SG KQKGLVG SRQE KVFAMTQ
Subjt:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ

KAA0042193.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.6e-5862.01Show/hide
Query:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------
        M V EYEK YT+LSKYATSVIEDEA RCK+F+EGLR+EIRT V A A W DF K  EAALRVEKS+ ERK EREASKNV      ++             
Subjt:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------

Query:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR
         GV ++GNFKSQ+S SSFSKS SGGG  R S SSHP++   GSHV +SD  +  S K SVCYN GQP HY RD   LI E NT+ KT SQT SQQ KTTR
Subjt:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR

Query:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ
        T GEG SG KQKG VG S QE KV AM Q
Subjt:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]5.1e-6868.12Show/hide
Query:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------
        M +AEYEKKYT+LS YAT VIEDE ERCK+FEEGLREEIRT VTACADW DFSK  EAALRVEKS+ ERK+ERE SKNV      ++             
Subjt:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------

Query:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR
         GV SRGNFKSQY+ SSFSKSGS GG QR S SSHPI  T GSH+ +SD VVS S+K SVCYN GQP HY RD   LIP  NTI KTTSQT SQQP+ T 
Subjt:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR

Query:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ
        T GEG SG KQKG VG SRQE KVFAMTQ
Subjt:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ

KAE8649800.1 hypothetical protein Csa_012219 [Cucumis sativus]7.4e-5993.7Show/hide
Query:  GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTRT
        GVPSRGNFKSQYS SSFSKSGSGGGTQR SCSSHPIYPTR SHVVQSD+VVSRS+KRSVCYNYGQP HY RDYLLLIPENNTIQKTTSQTGSQQPKTTRT
Subjt:  GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTRT

Query:  RGEGFSGVKQKGLVGSRQEWKVFAMTQ
        RGEG SGVKQKGLVGSRQEWKVFAMTQ
Subjt:  RGEGFSGVKQKGLVGSRQEWKVFAMTQ

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]2.9e-6366.81Show/hide
Query:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYWGVP---------
        M VAEYEKKYT+LSKYAT VI DE ERCK+FEEGLREEIRT VTACADW DFSK  E ALRVEKS+ ERKREREASKN+      ++   P         
Subjt:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYWGVP---------

Query:  ----SRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR
            SRG+FKSQYS SSFSKS SGGG QR S SSH I  T GSHV +S+ VVS S K SVCYN  Q  HY RD   LIP +NTI KTTSQT  QQ +TT 
Subjt:  ----SRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR

Query:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ
        T GEG SG KQKGLVG SRQE KVFAMTQ
Subjt:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ

TrEMBL top hitse value%identityAlignment
A0A5A7T1M0 Reverse transcriptase1.4e-6366.81Show/hide
Query:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYWGVP---------
        M VAEYEKKYT+LSKYAT VI DE ERCK+FEEGLREEIRT VTACADW DFSK  E ALRVEKS+ ERKREREASKN+      ++   P         
Subjt:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYWGVP---------

Query:  ----SRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR
            SRG+FKSQYS SSFSKS SGGG QR S SSH I  T GSHV +S+ VVS S K SVCYN  Q  HY RD   LIP +NTI KTTSQT  QQ +TT 
Subjt:  ----SRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR

Query:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ
        T GEG SG KQKGLVG SRQE KVFAMTQ
Subjt:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ

A0A5A7TG44 DNA/RNA polymerases superfamily protein8.0e-5962.01Show/hide
Query:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------
        M V EYEK YT+LSKYATSVIEDEA RCK+F+EGLR+EIRT V A A W DF K  EAALRVEKS+ ERK EREASKNV      ++             
Subjt:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------

Query:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR
         GV ++GNFKSQ+S SSFSKS SGGG  R S SSHP++   GSHV +SD  +  S K SVCYN GQP HY RD   LI E NT+ KT SQT SQQ KTTR
Subjt:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR

Query:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ
        T GEG SG KQKG VG S QE KV AM Q
Subjt:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ

A0A5A7UZM6 Gag protease polyprotein-like protein2.5e-6868.12Show/hide
Query:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------
        M +AEYEKKYT+LS YAT VIEDE ERCK+FEEGLREEIRT VTACADW DFSK  EAALRVEKS+ ERK+ERE SKNV      ++             
Subjt:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------

Query:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR
         GV SRGNFKSQY+ SSFSKSGS GG QR S SSHPI  T GSH+ +SD VVS S+K SVCYN GQP HY RD   LIP  NTI KTTSQT SQQP+ T 
Subjt:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR

Query:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ
        T GEG SG KQKG VG SRQE KVFAMTQ
Subjt:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ

A0A5D3BB91 Reverse transcriptase1.4e-6366.81Show/hide
Query:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYWGVP---------
        M VAEYEKKYT+LSKYAT VI DE ERCK+FEEGLREEIRT VTACADW DFSK  E ALRVEKS+ ERKREREASKN+      ++   P         
Subjt:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYWGVP---------

Query:  ----SRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR
            SRG+FKSQYS SSFSKS SGGG QR S SSH I  T GSHV +S+ VVS S K SVCYN  Q  HY RD   LIP +NTI KTTSQT  QQ +TT 
Subjt:  ----SRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR

Query:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ
        T GEG SG KQKGLVG SRQE KVFAMTQ
Subjt:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ

A0A5D3DT34 DNA/RNA polymerases superfamily protein8.0e-5962.01Show/hide
Query:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------
        M V EYEK YT+LSKYATSVIEDEA RCK+F+EGLR+EIRT V A A W DF K  EAALRVEKS+ ERK EREASKNV      ++             
Subjt:  MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYW------------

Query:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR
         GV ++GNFKSQ+S SSFSKS SGGG  R S SSHP++   GSHV +SD  +  S K SVCYN GQP HY RD   LI E NT+ KT SQT SQQ KTTR
Subjt:  -GVPSRGNFKSQYSDSSFSKSGSGGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTR

Query:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ
        T GEG SG KQKG VG S QE KV AM Q
Subjt:  TRGEGFSGVKQKGLVG-SRQEWKVFAMTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTTGCTGAATATGAGAAGAAATATACAAAATTATCTAAGTACGCCACTAGTGTGATTGAGGATGAGGCTGAAAGGTGTAAGCAATTTGAAGAGGGATTACGAGA
GGAAATTCGTACTCTTGTGACAGCTTGTGCAGATTGGGTTGATTTCTCAAAGTCAAGGGAGGCAGCACTAAGAGTAGAGAAAAGTGTGTATGAAAGAAAGCGTGAAAGAG
AAGCTTCCAAGAATGTAATGAAAAAAGTGGAAGATTTGTACTGGGGGGTGCCTAGTAGAGGAAATTTTAAGTCTCAGTACAGTGATTCATCTTTTTCTAAGTCTGGATCA
GGTGGAGGGACTCAGAGACTGAGCTGTTCTAGTCATCCTATATATCCTACAAGAGGTTCTCATGTTGTTCAATCTGATGAGGTAGTGTCAAGGTCTAACAAGAGGAGTGT
ATGTTATAACTATGGTCAACCATGTCATTATCATAGAGACTATCTACTTTTGATACCGGAGAACAATACCATTCAGAAAACTACTTCTCAGACAGGAAGTCAACAACCAA
AAACCACAAGAACAAGGGGTGAAGGCTTTAGTGGGGTAAAACAAAAAGGATTGGTGGGATCTCGTCAGGAATGGAAGGTTTTTGCAATGACACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGTTGCTGAATATGAGAAGAAATATACAAAATTATCTAAGTACGCCACTAGTGTGATTGAGGATGAGGCTGAAAGGTGTAAGCAATTTGAAGAGGGATTACGAGA
GGAAATTCGTACTCTTGTGACAGCTTGTGCAGATTGGGTTGATTTCTCAAAGTCAAGGGAGGCAGCACTAAGAGTAGAGAAAAGTGTGTATGAAAGAAAGCGTGAAAGAG
AAGCTTCCAAGAATGTAATGAAAAAAGTGGAAGATTTGTACTGGGGGGTGCCTAGTAGAGGAAATTTTAAGTCTCAGTACAGTGATTCATCTTTTTCTAAGTCTGGATCA
GGTGGAGGGACTCAGAGACTGAGCTGTTCTAGTCATCCTATATATCCTACAAGAGGTTCTCATGTTGTTCAATCTGATGAGGTAGTGTCAAGGTCTAACAAGAGGAGTGT
ATGTTATAACTATGGTCAACCATGTCATTATCATAGAGACTATCTACTTTTGATACCGGAGAACAATACCATTCAGAAAACTACTTCTCAGACAGGAAGTCAACAACCAA
AAACCACAAGAACAAGGGGTGAAGGCTTTAGTGGGGTAAAACAAAAAGGATTGGTGGGATCTCGTCAGGAATGGAAGGTTTTTGCAATGACACAATAG
Protein sequenceShow/hide protein sequence
MIVAEYEKKYTKLSKYATSVIEDEAERCKQFEEGLREEIRTLVTACADWVDFSKSREAALRVEKSVYERKREREASKNVMKKVEDLYWGVPSRGNFKSQYSDSSFSKSGS
GGGTQRLSCSSHPIYPTRGSHVVQSDEVVSRSNKRSVCYNYGQPCHYHRDYLLLIPENNTIQKTTSQTGSQQPKTTRTRGEGFSGVKQKGLVGSRQEWKVFAMTQ