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CSPI04G22510 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G22510
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionBED-type domain-containing protein
Genome locationChr4:20791707..20791976
RNA-Seq ExpressionCSPI04G22510
SyntenyCSPI04G22510
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591773.1 Zinc finger BED domain-containing protein RICESLEEPER 1, partial [Cucurbita argyrosperma subsp. sororia]4.7e-0767.39Show/hide
Query:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        T NDSR RLK   + LHETSQGQ+VMSDL++YLE  VFPR  DFN+
Subjt:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

KAG7024652.1 Zinc finger BED domain-containing protein RICESLEEPER 1 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-0767.39Show/hide
Query:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        T NDSR RLK   + LHETSQGQ+VMSDL++YLE  VFPR  DFN+
Subjt:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

XP_011654029.1 zinc finger BED domain-containing protein RICESLEEPER 1 [Cucumis sativus]6.1e-0767.39Show/hide
Query:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        TGN+SR RLK   + LHETSQ QSVMSDL++YLE  VFPR  DFN+
Subjt:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

XP_022935970.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita moschata]4.7e-0767.39Show/hide
Query:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        T NDSR RLK   + LHETSQGQ+VMSDL++YLE  VFPR  DFN+
Subjt:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

XP_022976722.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita maxima]4.7e-0767.39Show/hide
Query:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        T NDSR RLK   + LHETSQGQ+VMSDL++YLE  VFPR  DFN+
Subjt:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

TrEMBL top hitse value%identityAlignment
A0A0A0L1Z7 BED-type domain-containing protein3.0e-0767.39Show/hide
Query:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        TGN+SR RLK   + LHETSQ QSVMSDL++YLE  VFPR  DFN+
Subjt:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

A0A1S4E4C0 zinc finger BED domain-containing protein RICESLEEPER 1-like3.9e-0768.89Show/hide
Query:  GNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        GNDSR RLK   + LHETSQ QSVMSDL++YLE  VFPR  DFN+
Subjt:  GNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

A0A5A7VEC8 Zinc finger BED domain-containing protein RICESLEEPER 1-like3.9e-0768.89Show/hide
Query:  GNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        GNDSR RLK   + LHETSQ QSVMSDL++YLE  VFPR  DFN+
Subjt:  GNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

A0A6J1FC74 zinc finger BED domain-containing protein RICESLEEPER 1-like2.3e-0767.39Show/hide
Query:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        T NDSR RLK   + LHETSQGQ+VMSDL++YLE  VFPR  DFN+
Subjt:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

A0A6J1IN11 zinc finger BED domain-containing protein RICESLEEPER 1-like2.3e-0767.39Show/hide
Query:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL
        T NDSR RLK   + LHETSQGQ+VMSDL++YLE  VFPR  DFN+
Subjt:  TGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCATATTCAATCCGCTTTACAATGGGTGATCAAGGTTCAGCTTTGCGTGGAAGCACAGACAGGCAATGACTCTAGGCACAGGCTGAAGACCTTGAAAGAGTCCCT
TCATGAAACTTCTCAAGGTCAGAGTGTGATGTCTGACTTGAACAGATATTTAGAAGGATCAGTGTTTCCTCGAAAATTCGATTTCAACTTAAACAAACATATTAAATTGA
TGAAAGGTCTACATGCAGAGGTAACCAATCTTGTCCATGATGGCTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCATATTCAATCCGCTTTACAATGGGTGATCAAGGTTCAGCTTTGCGTGGAAGCACAGACAGGCAATGACTCTAGGCACAGGCTGAAGACCTTGAAAGAGTCCCT
TCATGAAACTTCTCAAGGTCAGAGTGTGATGTCTGACTTGAACAGATATTTAGAAGGATCAGTGTTTCCTCGAAAATTCGATTTCAACTTAAACAAACATATTAAATTGA
TGAAAGGTCTACATGCAGAGGTAACCAATCTTGTCCATGATGGCTCGTGA
Protein sequenceShow/hide protein sequence
MMHIQSALQWVIKVQLCVEAQTGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNLNKHIKLMKGLHAEVTNLVHDGS