; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G22520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G22520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description50S ribosomal protein L13
Genome locationChr4:20796224..20799576
RNA-Seq ExpressionCSPI04G22520
SyntenyCSPI04G22520
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.4e-12489.92Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N   SN++ PR SL+  FPLP SKSSFL TQT+I+LTS  K S  QVRAQELDRVPLEQRWMF+GDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_004146016.1 50S ribosomal protein L13, chloroplastic [Cucumis sativus]2.1e-137100Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_008463780.1 PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo]3.1e-13396.37Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+LTNGTTSN+S P NSLLVAFPLPHSKSSFLLTQT+I LTSNSKRSAL+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]1.5e-12490.32Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N   SN++ PR SL+  FPLP SKSSFL TQT+I+LTS  K S  QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]1.2e-12490.73Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL NG  SN++ PR SL+  FPL  SKSSFL TQT+I+LTS  K S LQVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein9.9e-138100Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A1S3CK07 50S ribosomal protein L13, chloroplastic1.5e-13396.37Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+LTNGTTSN+S P NSLLVAFPLPHSKSSFLLTQT+I LTSNSKRSAL+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like1.2e-12288.71Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTF +HSTL NG+ SN+  PR S +  FPLP SKS  L TQT+I+L S SK S +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like7.4e-12590.32Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N   SN++ PR SL+  FPLP SKSSFL TQT+I+LTS  K S  QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like3.1e-12389.11Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHST  N   SN++ PR SL+  FPLP SKSSFL TQT+I+LTS  K S  QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

SwissProt top hitse value%identityAlignment
B8HMT1 50S ribosomal protein L131.2e-5067.12Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK  P YTPS+D G FVIVVNAEK+AV+GKKRTQK+YRRHSGRPGGM  ETF +LQ R+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR
        ERIIEHAV+GMLPK  LGR LF  LKVY GPDHPH+AQKP  L ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR

P12629 50S ribosomal protein L13, chloroplastic1.7e-8164.14Show/hide
Query:  MLCASSSTPTFSLHSTLTNGT----TSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-ELDRVPLEQRWMFEGDELDGPDIWNKT
        M CASS T   +       GT    T   SFPR ++  A  +   KS    T  S   T   ++    V+ +  +  VPL+QRWMF  +E  GPDIWN T
Subjt:  MLCASSSTPTFSLHSTLTNGT----TSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-ELDRVPLEQRWMFEGDELDGPDIWNKT

Query:  WYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERI
        WYPK+ADHV T+K WYVVDATD ILGR+ASTIA HIRGK+L +YTPSVDMGAFVIVVNA+K+AVSGKKRTQKLYRRHSGRPGG+  ETFDQLQ+RIPERI
Subjt:  WYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERI

Query:  IEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        IEHAVRGMLPKGRLGR LFNHLKVYKG +HPH+AQ+P+DLP+RDKRI  E+
Subjt:  IEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

Q3MF94 50S ribosomal protein L135.8e-5067.59Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNAEK+AV+GKKRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP +L I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI

Q8YPK6 50S ribosomal protein L131.7e-4966.9Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNA+K+AV+GKKRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP +L I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPI

Q9SYL9 50S ribosomal protein L13, chloroplastic2.6e-9068.38Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC SSST   S  S  ++G+     F          L  S ++       + + +NSKR  LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEK+AVSGKKR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP+DLPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein1.8e-9168.38Show/hide
Query:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC SSST   S  S  ++G+     F          L  S ++       + + +NSKR  LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEK+AVSGKKR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP+DLPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein2.7e-1837.6Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA++I  +G+K T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVD
               L++++G +HP    KP++
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVD

AT3G01790.2 Ribosomal protein L13 family protein2.7e-1837.6Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA++I  +G+K T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVD
               L++++G +HP    KP++
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACATTCCACTCTCACCAATGGAACCACGAGTAACAAAAGCTTTCCCAGAAACTCACTCCTTGTTGC
CTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCTCCATTTCTCTAACCTCCAATTCCAAGAGGTCGGCCCTTCAAGTGCGAGCCCAAGAGCTGGATC
GTGTCCCTTTGGAACAACGGTGGATGTTCGAGGGCGACGAGCTCGACGGCCCTGATATATGGAATAAAACGTGGTACCCGAAGGCGGCAGATCATGTGAACACAGAAAAA
CCTTGGTACGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCAACTATTGCCAATCATATCCGAGGGAAGGATTTGCCAACCTATACTCCTAGTGTGGATAT
GGGTGCTTTTGTGATTGTGGTAAATGCAGAAAAAATTGCGGTGTCTGGTAAAAAGAGGACTCAGAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACTGTAG
AAACTTTTGATCAGCTACAGCAGAGAATTCCTGAAAGAATTATCGAGCATGCTGTTCGTGGTATGCTTCCAAAAGGGAGGCTTGGAAGAGCACTCTTTAACCACTTGAAG
GTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGACCTGCCAATTAGGGACAAAAGGATAAACAAAGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
GTAGAAGAGAAGTTGTGTTTGGCAAATTTATCCATTCCCACCGTTTTCCCTTTTCTCATCTCCGAATTCACAAAGGGGCAAGAAGGAGTCTTATCCACATTCCATAGCAG
CAATTCACCAACTGAAAGAGCCACTGCCAGAGCTACAATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACATTCCACTCTCACCAATGGAACCACGA
GTAACAAAAGCTTTCCCAGAAACTCACTCCTTGTTGCCTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCTCCATTTCTCTAACCTCCAATTCCAAG
AGGTCGGCCCTTCAAGTGCGAGCCCAAGAGCTGGATCGTGTCCCTTTGGAACAACGGTGGATGTTCGAGGGCGACGAGCTCGACGGCCCTGATATATGGAATAAAACGTG
GTACCCGAAGGCGGCAGATCATGTGAACACAGAAAAACCTTGGTACGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCAACTATTGCCAATCATATCCGAG
GGAAGGATTTGCCAACCTATACTCCTAGTGTGGATATGGGTGCTTTTGTGATTGTGGTAAATGCAGAAAAAATTGCGGTGTCTGGTAAAAAGAGGACTCAGAAACTATAC
AGGAGGCATTCAGGGCGACCAGGTGGTATGACTGTAGAAACTTTTGATCAGCTACAGCAGAGAATTCCTGAAAGAATTATCGAGCATGCTGTTCGTGGTATGCTTCCAAA
AGGGAGGCTTGGAAGAGCACTCTTTAACCACTTGAAGGTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGACCTGCCAATTAGGGACAAAAGGATAA
ACAAAGAAAGATAGTGTATGAACTACTAAGAGCAAACGATGGACGAAGAGACAACGCTCTCTTGTCTGAGGTTTTCAATGTTCATAGAAACGAGTCAGAGTTTCCATGCT
TCAACTCAATTTGATATCAGCATTTGATCTGTAATTTAATTCCAAATTCTAGTATCTTGACCCAAAGTTGCGTTTGCAGAGTTATTAAATCAGAAGAGGAAATCCTTAAA
TCTTGCCCTGTTAAAGGCTGTGATAATGGTACTTTTATTACATTTGTTGATTGATTTCTCTATTTAGAGAGTTCTCTTGGTGTAGAAATGGCCAAAGGTTTCGAACGATA
GTGTGCACTTTTGGAGCTCTAAAAGGCATATATTAATATAATAGATACATTATGTGGAGTTGTTA
Protein sequenceShow/hide protein sequence
MAMLCASSSTPTFSLHSTLTNGTTSNKSFPRNSLLVAFPLPHSKSSFLLTQTSISLTSNSKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAADHVNTEK
PWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLK
VYKGPDHPHEAQKPVDLPIRDKRINKER