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CSPI04G23020 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G23020
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:21205318..21205668
RNA-Seq ExpressionCSPI04G23020
SyntenyCSPI04G23020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8703294.1 putative Mitochondrial transcription termination factor family protein [Hibiscus syriacus]5.6e-0460Show/hide
Query:  MESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
        +E  ++A+ AS+QR GG+PF+ +RTSPGGPD HHH
Subjt:  MESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
KAG6607905.1 hypothetical protein SDJN03_01247, partial [Cucurbita argyrosperma subsp. sororia]6.6e-1368.18Show/hide
Query:  VCFITVIILLPFLSFGSAPPPPPPPSPPSGFMESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
        +CF  VIIL+PFLSFG+       PS PSGFMESA++ALMASL RQG + FQVQR++PGGPDQHHH
Subjt:  VCFITVIILLPFLSFGSAPPPPPPPSPPSGFMESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
KGN55082.1 hypothetical protein Csa_012608 [Cucumis sativus]3.7e-3296.3Show/hide
Query:  MAKAIIVMIKFFFVCFITVIILLPFLSFGSAPPPPPPP--SPPSGFMESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
        MAKAIIVMIKFFFVCFITVIILLPFLSFGSAPPPPPPP  SPPSGFMESAKDALMASLQR+GGKPFQVQRTSPGGPDQHHH
Subjt:  MAKAIIVMIKFFFVCFITVIILLPFLSFGSAPPPPPPP--SPPSGFMESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
TrEMBL top hitse value%identityAlignment
A0A0A0L3B3 Uncharacterized protein1.8e-3296.3Show/hide
Query:  MAKAIIVMIKFFFVCFITVIILLPFLSFGSAPPPPPPP--SPPSGFMESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
        MAKAIIVMIKFFFVCFITVIILLPFLSFGSAPPPPPPP  SPPSGFMESAKDALMASLQR+GGKPFQVQRTSPGGPDQHHH
Subjt:  MAKAIIVMIKFFFVCFITVIILLPFLSFGSAPPPPPPP--SPPSGFMESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
A0A6A3AFG2 Putative Mitochondrial transcription termination factor family protein2.7e-0460Show/hide
Query:  MESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
        +E  ++A+ AS+QR GG+PF+ +RTSPGGPD HHH
Subjt:  MESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAGCCATTATTGTAATGATAAAGTTCTTCTTCGTTTGCTTTATTACTGTAATCATTTTGCTGCCATTTTTGAGCTTTGGATCAGCTCCTCCTCCTCCTCCTCC
TCCTTCTCCTCCAAGTGGCTTCATGGAAAGTGCTAAGGATGCATTAATGGCTAGTCTCCAAAGACAAGGTGGAAAGCCCTTTCAGGTGCAGCGAACCAGCCCTGGAGGAC
CCGATCAACACCATCATTAA
mRNA sequenceShow/hide mRNA sequence
CACAACCAAATAAGAGAGCCATGGCTAAAGCCATTATTGTAATGATAAAGTTCTTCTTCGTTTGCTTTATTACTGTAATCATTTTGCTGCCATTTTTGAGCTTTGGATCA
GCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCAAGTGGCTTCATGGAAAGTGCTAAGGATGCATTAATGGCTAGTCTCCAAAGACAAGGTGGAAAGCCCTTTCAGGTGCA
GCGAACCAGCCCTGGAGGACCCGATCAACACCATCATTAATGATCGGGGGAAGCCTAATGATCTCATCATGAACTACGATGATAATAGGGTTAAAACTATACAAAATATT
CCTAAATTTTAGAGTAATTCG
Protein sequenceShow/hide protein sequence
MAKAIIVMIKFFFVCFITVIILLPFLSFGSAPPPPPPPSPPSGFMESAKDALMASLQRQGGKPFQVQRTSPGGPDQHHH