; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G23140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G23140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPolynucleotidyl transferase ribonuclease H-like superfamily protein
Genome locationChr4:21305849..21308892
RNA-Seq ExpressionCSPI04G23140
SyntenyCSPI04G23140
Gene Ontology termsGO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146041.1 uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus]4.2e-19199.69Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
        MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL

Query:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
        QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
Subjt:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH

Query:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
        QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFY KKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
Subjt:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQVTARRNPKSPQHVKFLFENRI
        AHLQVTARRNPKSPQHVKFLFENRI
Subjt:  AHLQVTARRNPKSPQHVKFLFENRI

XP_008463707.1 PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis melo]1.9e-18395.69Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
        MFLRASLLK SSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSA P+SHEPSSSA S+FPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL

Query:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
        QVDVARSNHMRTQD DYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY DVIQQFEDWLVQH
Subjt:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH

Query:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
        QLWRKE GGVLDRAAFVTCGNWDIKTQVPHQC+VSKMKLPDYFMEWINIKDVYLNFY KKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGDG
Subjt:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQVTARRNPKSPQHVKFLFENRI
        AHLQ+TARRNPKSPQ VKFLFENRI
Subjt:  AHLQVTARRNPKSPQHVKFLFENRI

XP_022935722.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita moschata]5.0e-16887.38Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
        MF+RA LLK SSFYSIPCH L+P+ LSS+ICSSPRTP SIRCHS+ P +H+PSSSA SE  DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISREL
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL

Query:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
        QVDVA S HMRTQD ++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLV+H
Subjt:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH

Query:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
        QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVS MKLPDYFMEWINIKDVYLNFY KKATGM TMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Subjt:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQVTARRNPKSPQHVKFLFENRI
        AHLQ+TARRNP SPQHVKF FENRI
Subjt:  AHLQVTARRNPKSPQHVKFLFENRI

XP_022976542.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxima]8.6e-16887.08Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
        MF+RA LLK SSFYSIPCH L+P+SLSS+ICSSPRTP +IRCHS+ P +HEPSSSA SE  DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISREL
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL

Query:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
        QVDVA S HMRTQD ++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLV+H
Subjt:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH

Query:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
        Q+WRK+LGGVLDRAAFVTCGNWDIKTQVPHQCSVS MKLPDYFMEWINIKDVYLNFY KKATGMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Subjt:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQVTARRNPKSPQHVKFLFENRI
        AHLQ+TARRNP SPQHVKF FENRI
Subjt:  AHLQVTARRNPKSPQHVKFLFENRI

XP_038896828.1 uncharacterized exonuclease domain-containing protein At3g15140 [Benincasa hispida]9.4e-17591.38Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
        MFLRA LLK S  YSIPCH L+P+SLSSSICSS RTPF +RCHSA P+SHEPSSS  SEFPDVADNRWRPTCLYFT G+CTMMDDPLHIKKFNHDIS EL
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL

Query:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
        QVDVARSNHMR QD D+FLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAIL+KDVIQ+FEDWLVQH
Subjt:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH

Query:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
        QLWRKELGGVLDRAAFVTCGNWDIKTQ PHQCSVSKMKLPDYFMEWINIKDVYLNFY KKATGMATMMRQLE+PLVGSHHLGIDDTKNIVRV+QRMV DG
Subjt:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQVTARRNPKSPQHVKFLFENRI
        AHLQ TARRNPKSPQHVKFLFENRI
Subjt:  AHLQVTARRNPKSPQHVKFLFENRI

TrEMBL top hitse value%identityAlignment
A0A0A0L4N2 Exonuclease domain-containing protein2.0e-19199.69Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
        MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL

Query:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
        QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
Subjt:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH

Query:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
        QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFY KKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
Subjt:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQVTARRNPKSPQHVKFLFENRI
        AHLQVTARRNPKSPQHVKFLFENRI
Subjt:  AHLQVTARRNPKSPQHVKFLFENRI

A0A1S3CJV9 uncharacterized exonuclease domain-containing protein At3g15140 isoform X19.2e-18495.69Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
        MFLRASLLK SSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSA P+SHEPSSSA S+FPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL

Query:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
        QVDVARSNHMRTQD DYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY DVIQQFEDWLVQH
Subjt:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH

Query:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
        QLWRKE GGVLDRAAFVTCGNWDIKTQVPHQC+VSKMKLPDYFMEWINIKDVYLNFY KKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGDG
Subjt:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQVTARRNPKSPQHVKFLFENRI
        AHLQ+TARRNPKSPQ VKFLFENRI
Subjt:  AHLQVTARRNPKSPQHVKFLFENRI

A0A6J1CCI3 uncharacterized exonuclease domain-containing protein At3g151402.3e-15882.93Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSA-SSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRE
        MFLRA LLK SSFYSIPC+PL+P+SL SS+ SS RTPF IRCH++ P +HEPSSSA     P+ ADNRWRP CLY+T G+CTMMDDPLH+KKFNHDISR 
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSA-SSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRT--QDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWL
        LQV+ ARSNH RT  QD D+FLVLDLEGKVEIIEFPVILV+AKT+GVTGFFHRFVRPS MSE+RINEYIEGKYGKFGVDRVWHDTAI YK+VIQQFEDWL
Subjt:  LQVDVARSNHMRT--QDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWL

Query:  VQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMV
        V+HQLW+KELGG LDRAAFVTCGNWDIKTQVPHQCSVS ++LP+YFMEWINIKDVYLNFY KKATGM TMMRQLE+PL+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMV

Query:  GDGAHLQVTARRNPKSPQHVKFLFENRI
         DGA LQ+TARRNP SPQHVKFLFENRI
Subjt:  GDGAHLQVTARRNPKSPQHVKFLFENRI

A0A6J1F6E0 uncharacterized exonuclease domain-containing protein At3g151402.4e-16887.38Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
        MF+RA LLK SSFYSIPCH L+P+ LSS+ICSSPRTP SIRCHS+ P +H+PSSSA SE  DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISREL
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL

Query:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
        QVDVA S HMRTQD ++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLV+H
Subjt:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH

Query:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
        QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVS MKLPDYFMEWINIKDVYLNFY KKATGM TMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Subjt:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQVTARRNPKSPQHVKFLFENRI
        AHLQ+TARRNP SPQHVKF FENRI
Subjt:  AHLQVTARRNPKSPQHVKFLFENRI

A0A6J1IG11 uncharacterized exonuclease domain-containing protein At3g151404.1e-16887.08Show/hide
Query:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL
        MF+RA LLK SSFYSIPCH L+P+SLSS+ICSSPRTP +IRCHS+ P +HEPSSSA SE  DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISREL
Subjt:  MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISREL

Query:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH
        QVDVA S HMRTQD ++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLV+H
Subjt:  QVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQH

Query:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
        Q+WRK+LGGVLDRAAFVTCGNWDIKTQVPHQCSVS MKLPDYFMEWINIKDVYLNFY KKATGMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Subjt:  QLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQVTARRNPKSPQHVKFLFENRI
        AHLQ+TARRNP SPQHVKF FENRI
Subjt:  AHLQVTARRNPKSPQHVKFLFENRI

SwissProt top hitse value%identityAlignment
A6QLH5 ERI1 exoribonuclease 33.0e-2229.52Show/hide
Query:  QDFDYFLVLDLEGKV--------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWR
        Q + YFLVLD E           EIIEFP++ +N +TM +   FH +V+P  +   ++  +        G+ +   D     + V+++ ++W+ +     
Subjt:  QDFDYFLVLDLEGKV--------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWR

Query:  KELGGVLD---RAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVY---LNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVG
            G+LD   ++ FVTCG+WD+K  +P QC    + + DYF +WIN+K  Y   +  + K   G+  M + L +  +G  H GIDD KNI  +++ +  
Subjt:  KELGGVLD---RAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVY---LNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVG

Query:  DGAHLQVTAR
         G   + T++
Subjt:  DGAHLQVTAR

Q5FVR4 3'-5' exoribonuclease 11.6e-2330.1Show/hide
Query:  FDYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWR
        +DY  ++D E             EIIEFPV+L+N  ++ +   F ++VRP   S+  ++E+     G  G+ +   D A  +  V+++  +W+   +L  
Subjt:  FDYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWR

Query:  KELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFY--AKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAH
            G   +   +T G+WD+   +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+DD+KNI R+  RM+ DG  
Subjt:  KELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFY--AKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAH

Query:  LQVTAR
        L++  +
Subjt:  LQVTAR

Q7TMF2 3'-5' exoribonuclease 13.5e-2330.1Show/hide
Query:  FDYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWR
        +DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      +++E+     G  G+ +   D A  +  V+++  +W+   +L  
Subjt:  FDYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWR

Query:  KELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFY--AKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAH
            G   +   +T G+WD+   +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+DD+KNI R+  RM+ DG  
Subjt:  KELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFY--AKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAH

Query:  LQVTAR
        L++  +
Subjt:  LQVTAR

Q8IV48 3'-5' exoribonuclease 16.0e-2329.61Show/hide
Query:  FDYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWR
        +DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      +++++        G+ +   D A  +  V+++  DW+   +L  
Subjt:  FDYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWR

Query:  KELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFY--AKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAH
            G   + + +T G+WD+   +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+DD+KNI R+  RM+ DG  
Subjt:  KELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFY--AKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAH

Query:  LQVTAR
        L++  +
Subjt:  LQVTAR

Q8W566 Uncharacterized exonuclease domain-containing protein At3g151404.1e-10455.93Show/hide
Query:  RASLLKFSSF----YSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFP--DVADN-RWRPTCLYFTHGRCTMMDDPLHIKKFNHDI
        R SL + S F    +S P   L        +C+S  +       S F  S   SSS+ S F   + ++N RWRP CLY+THG+CT MDDP H++ FNHD 
Subjt:  RASLLKFSSF----YSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFP--DVADN-RWRPTCLYFTHGRCTMMDDPLHIKKFNHDI

Query:  SRELQVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDW
        S+EL+V  A     ++Q+F++FLV+DLEGKVEI+EFP+++V+AKTM V   FHRFVRP++MSEQ IN+YIEGKYG+ GVDRVWHDTAI +K V+++FE W
Subjt:  SRELQVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDW

Query:  LVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRM
        L +H LW K+    L+ AAFVTCGNWDIKT++P QC VS + LP YFMEWIN+KDVYLNFY ++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM
Subjt:  LVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRM

Query:  VGDGAHLQVTARRNPKSPQHVKFLFENRI
        + +GA L++TARR+  + ++V+FLF+NRI
Subjt:  VGDGAHLQVTARRNPKSPQHVKFLFENRI

Arabidopsis top hitse value%identityAlignment
AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-10555.93Show/hide
Query:  RASLLKFSSF----YSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFP--DVADN-RWRPTCLYFTHGRCTMMDDPLHIKKFNHDI
        R SL + S F    +S P   L        +C+S  +       S F  S   SSS+ S F   + ++N RWRP CLY+THG+CT MDDP H++ FNHD 
Subjt:  RASLLKFSSF----YSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFP--DVADN-RWRPTCLYFTHGRCTMMDDPLHIKKFNHDI

Query:  SRELQVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDW
        S+EL+V  A     ++Q+F++FLV+DLEGKVEI+EFP+++V+AKTM V   FHRFVRP++MSEQ IN+YIEGKYG+ GVDRVWHDTAI +K V+++FE W
Subjt:  SRELQVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDW

Query:  LVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRM
        L +H LW K+    L+ AAFVTCGNWDIKT++P QC VS + LP YFMEWIN+KDVYLNFY ++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM
Subjt:  LVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRM

Query:  VGDGAHLQVTARRNPKSPQHVKFLFENRI
        + +GA L++TARR+  + ++V+FLF+NRI
Subjt:  VGDGAHLQVTARRNPKSPQHVKFLFENRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTGAGAGCTTCGCTGCTTAAGTTTTCATCATTCTACTCAATCCCATGTCATCCTCTGCTTCCCGTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACC
TTTCTCTATCCGATGCCATTCAGCTTTCCCCTTATCCCACGAACCATCTTCTTCAGCTTCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGT
ATTTCACTCATGGCAGGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAACCATATG
CGAACTCAGGACTTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTAAATGCCAAGACGATGGGTGTGACAGGTTT
TTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAGAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCA
TACTGTACAAGGATGTTATTCAACAGTTCGAGGATTGGCTGGTTCAGCATCAGCTATGGAGAAAGGAACTGGGCGGTGTTCTTGATCGAGCGGCATTTGTGACATGTGGC
AACTGGGATATAAAAACTCAGGTCCCACATCAATGTAGCGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTA
CGCAAAAAAGGCAACGGGAATGGCGACAATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGTATAGATGATACAAAGAATATCGTGAGAGTGTTGC
AGAGAATGGTTGGTGATGGAGCACATTTGCAAGTCACTGCACGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAG
mRNA sequenceShow/hide mRNA sequence
TGATAAATAAAAATAAAATAATTTTGGGTAATAGCCCTCGAATTTGCTGCTCCAGAATTCGACCACTCTAACGTCCGTCGTCTTCCCCGGCTCCGGTCGACCGTCGGAGT
GTGTACGTCATCCACTCACTTCCCTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCTTAAGTTTTCATCATTCTACTCAATCCCATGTCATCCTCTGCTTCCCGTC
TCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTTTCCCCTTATCCCACGAACCATCTTCTTCAGCTTCCTCTGAATTCCC
CGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACTCATGGCAGGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCA
GGGAGCTTCAGGTAGATGTTGCTAGGTCAAACCATATGCGAACTCAGGACTTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTC
ATATTAGTAAATGCCAAGACGATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAGAGAATAAATGAATACATTGAAGGAAAATATGG
CAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATTCAACAGTTCGAGGATTGGCTGGTTCAGCATCAGCTATGGAGAAAGGAACTGG
GCGGTGTTCTTGATCGAGCGGCATTTGTGACATGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAGCGTGTCGAAGATGAAACTTCCTGACTATTTTATG
GAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGCAAAAAAGGCAACGGGAATGGCGACAATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCT
TGGTATAGATGATACAAAGAATATCGTGAGAGTGTTGCAGAGAATGGTTGGTGATGGAGCACATTTGCAAGTCACTGCACGAAGGAATCCTAAATCTCCTCAACATGTTA
AGTTTCTTTTTGAGAACCGTATTTAGTGATGGCTGTCTTCAGCAAGTTATCTTCCATATTTGTCTGGATGATCTATGGAATGGATAAGTCTTAAAATAGATACTTCGATC
TCATGAATTGTAGATGAATCTGTCAATTCAGTTCTGATGTGTTTCAAGTGTTGAAATTTGACCAGATGAAATATGTTGCAATT
Protein sequenceShow/hide protein sequence
MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHM
RTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCG
NWDIKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYAKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQVTARRNPKSPQHVKFLFENRI