; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G23530 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G23530
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:21599646..21600359
RNA-Seq ExpressionCSPI04G23530
SyntenyCSPI04G23530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064333.1 hypothetical protein E6C27_scaffold255G00320 [Cucumis melo var. makuwa]1.2e-3776.19Show/hide
Query:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRGQQKLMHDDDDNMEVDSDFETE---
        MASRLILKDIK PLRFLLRNPASSAPSAQAIQNLLLPIPRQ P  FL QVCT  RPQLSGV NS VDGGFRIEVRG+Q+L + DDDNME+DSDFE E   
Subjt:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRGQQKLMHDDDDNMEVDSDFETE---

Query:  -FSDEDDECYDTEDMEPQDDDDDDDE
         F  +DD+ +DT++MEPQDDDDD++E
Subjt:  -FSDEDDECYDTEDMEPQDDDDDDDE

KAE8649846.1 hypothetical protein Csa_012085 [Cucumis sativus]1.1e-5498.37Show/hide
Query:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRGQQKLMHDDDDNMEVDSDFETEFSD
        MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPV LPQVCTRDRPQLSGVLNSIVDGGFRIEVRGQQKLMHDDDDNMEVDSD ETEFSD
Subjt:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRGQQKLMHDDDDNMEVDSDFETEFSD

Query:  EDDECYDTEDMEPQDDDDDDDET
        EDDECYDTEDMEPQDDDDDDDET
Subjt:  EDDECYDTEDMEPQDDDDDDDET

KAG6591964.1 hypothetical protein SDJN03_14310, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1553.91Show/hide
Query:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFE----
        MASR ILKD+KAP+ FLLRNPASS P AQ+I N LLP P QS   FL ++   DRP L    NS  DGGFRIEVRG QQ ++ D D+  E DSDFE    
Subjt:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFE----

Query:  ------TEFSDEDDECYDTEDMEPQDDD
               EFS  D    D +D EP DD+
Subjt:  ------TEFSDEDDECYDTEDMEPQDDD

XP_022936831.1 uncharacterized protein LOC111443300 [Cucurbita moschata]9.9e-1653.33Show/hide
Query:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFETEFS
        MASR ILKD+KAP+ FLLRNPASS P AQ+I N LLP P QS   FL ++   DRP L    NS  DGGFRIEVRG QQ ++ D D+  + DSDFE    
Subjt:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFETEFS

Query:  DEDDECYDTEDMEPQDDDDD
         + + C +    +  DDDDD
Subjt:  DEDDECYDTEDMEPQDDDDD

XP_022976605.1 uncharacterized protein LOC111476951 [Cucurbita maxima]4.4e-1653.17Show/hide
Query:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFETE--
        MASR ILKD+KAP+  LLRNPASS P AQ+IQN LLP PRQS   FL ++   DRP L    NS  DGGFRIEVRG QQ ++ D D+  E +SD E    
Subjt:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFETE--

Query:  FSDED------DECYDTEDMEPQDDD
        F+ E       D+  D +D EP+DD+
Subjt:  FSDED------DECYDTEDMEPQDDD

TrEMBL top hitse value%identityAlignment
A0A0A0L3F1 Uncharacterized protein1.8e-1597.96Show/hide
Query:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQ
        MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPV LPQ
Subjt:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQ

A0A5A7V875 Uncharacterized protein5.8e-3876.19Show/hide
Query:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRGQQKLMHDDDDNMEVDSDFETE---
        MASRLILKDIK PLRFLLRNPASSAPSAQAIQNLLLPIPRQ P  FL QVCT  RPQLSGV NS VDGGFRIEVRG+Q+L + DDDNME+DSDFE E   
Subjt:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRGQQKLMHDDDDNMEVDSDFETE---

Query:  -FSDEDDECYDTEDMEPQDDDDDDDE
         F  +DD+ +DT++MEPQDDDDD++E
Subjt:  -FSDEDDECYDTEDMEPQDDDDDDDE

A0A6J1F8K5 uncharacterized protein LOC1114433004.8e-1653.33Show/hide
Query:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFETEFS
        MASR ILKD+KAP+ FLLRNPASS P AQ+I N LLP P QS   FL ++   DRP L    NS  DGGFRIEVRG QQ ++ D D+  + DSDFE    
Subjt:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFETEFS

Query:  DEDDECYDTEDMEPQDDDDD
         + + C +    +  DDDDD
Subjt:  DEDDECYDTEDMEPQDDDDD

A0A6J1IJY0 uncharacterized protein LOC1114769512.2e-1653.17Show/hide
Query:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFETE--
        MASR ILKD+KAP+  LLRNPASS P AQ+IQN LLP PRQS   FL ++   DRP L    NS  DGGFRIEVRG QQ ++ D D+  E +SD E    
Subjt:  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRG-QQKLMHDDDDNMEVDSDFETE--

Query:  FSDED------DECYDTEDMEPQDDD
        F+ E       D+  D +D EP+DD+
Subjt:  FSDED------DECYDTEDMEPQDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAGGTTGATTCTCAAGGACATCAAAGCCCCTCTCCGATTCCTTCTCCGCAATCCAGCTTCATCCGCTCCTTCTGCACAAGCCATCCAAAATCTCCTCCTCCC
AATTCCAAGGCAATCTCCACCCGTATTCCTCCCCCAGGTTTGTACTCGCGATCGGCCGCAACTATCTGGGGTTCTCAATTCTATTGTTGATGGCGGATTTAGGATCGAGG
TCAGAGGGCAGCAGAAGCTGATGCATGACGACGACGACAATATGGAGGTCGATAGTGATTTCGAAACCGAGTTCTCTGATGAGGACGATGAATGTTATGACACCGAAGAT
ATGGAGCCTCAAGATGATGATGATGATGATGATGAGACTTGA
mRNA sequenceShow/hide mRNA sequence
CCCTAAAACCCTAAACCCTCTTCTTCATTGGCCGCTCTATAAATACCCATTTCTTTTCCCTTCCCCTCTAAATTATTCTCCTCTACGGGTCTCTCTCCCTTCTCTTCGTT
TCTTCAACCTCCTGCAATGGCTTCCAGGTTGATTCTCAAGGACATCAAAGCCCCTCTCCGATTCCTTCTCCGCAATCCAGCTTCATCCGCTCCTTCTGCACAAGCCATCC
AAAATCTCCTCCTCCCAATTCCAAGGCAATCTCCACCCGTATTCCTCCCCCAGGTTTGTACTCGCGATCGGCCGCAACTATCTGGGGTTCTCAATTCTATTGTTGATGGC
GGATTTAGGATCGAGGTCAGAGGGCAGCAGAAGCTGATGCATGACGACGACGACAATATGGAGGTCGATAGTGATTTCGAAACCGAGTTCTCTGATGAGGACGATGAATG
TTATGACACCGAAGATATGGAGCCTCAAGATGATGATGATGATGATGATGAGACTTGAATTGATATGTTTGATTGTTGCTGTTTGAATTTCAATTTGGTTTCATATAATC
ATCATTTGGTTTCGATATATCCGTGAAATTGGAAATTCCATATCCAAATTGATGATTTTGAGTTTGAATGCAACTTTGATCATGGGTGTTCGTTTTTTTTTTTTTTTTCC
TAAGAACTTTTGAGTTCACTATATCCGAAGTTTAAATACCATTTTGGTCGTTTG
Protein sequenceShow/hide protein sequence
MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVFLPQVCTRDRPQLSGVLNSIVDGGFRIEVRGQQKLMHDDDDNMEVDSDFETEFSDEDDECYDTED
MEPQDDDDDDDET