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CSPI04G23580 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G23580
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:21624485..21625167
RNA-Seq ExpressionCSPI04G23580
SyntenyCSPI04G23580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591970.1 hypothetical protein SDJN03_14316, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3049.34Show/hide
Query:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSLPTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG
        MAVT+ S LVGLLAFLCLSL SANR+LKNNDAE +L+ ++V S ++N  Q+ N+ ELKS+P  ++ K+SS+    GDC   G N        CG  G GG
Subjt:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSLPTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG

Query:  CGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQ-GCQSC-----GCQA----------SMDDSKVEQDSVQTGEPAPVVTIV
               G GG S     G GGGSS CQ C T S C WQGC G Q CQGCQ GCQ C     GCQA          +++DSK++ +S+  GE        
Subjt:  CGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQ-GCQSC-----GCQA----------SMDDSKVEQDSVQTGEPAPVVTIV

Query:  PPAKPTDNDIKSSGGSNQDIKSNGGLV
        PP  P ++ IKSSGG+NQD+KSNGGLV
Subjt:  PPAKPTDNDIKSSGGSNQDIKSNGGLV

KAG6607873.1 hypothetical protein SDJN03_01215, partial [Cucurbita argyrosperma subsp. sororia]8.4e-1537.56Show/hide
Query:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSL-PTDSMAKISSINPINGDCCSYGTNCGIYP-PPTCGCGGC
        MAVT+ S+LV LL  LCLS  SANR+LK+ND+EN+ I + V  G+E    N  H EL ++ P  S+ K  S      DCC++G + G Y  PP   C   
Subjt:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSL-PTDSMAKISSINPINGDCCSYGTNCGIYP-PPTCGCGGC

Query:  GGCGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEPAPVVTIVPPAKPTDNDIKSSG
                               G +S C+   +CS CQW                 CGC      S V Q+S+QT E A +   VP  +P +++IK SG
Subjt:  GGCGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEPAPVVTIVPPAKPTDNDIKSSG

Query:  GSNQDIKSNGGLV
        G+NQ++KSNGGLV
Subjt:  GSNQDIKSNGGLV

KGN55137.1 hypothetical protein Csa_012773 [Cucumis sativus]1.2e-10999.05Show/hide
Query:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSLPTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG
        MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKS+PTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG
Subjt:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSLPTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG

Query:  CGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEPAPVVTIVPPAKPTDNDIKSSGGS
        C GCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEPAPVVTIVPPAKPTDNDIKSSGGS
Subjt:  CGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEPAPVVTIVPPAKPTDNDIKSSGGS

Query:  NQDIKSNGGLV
        NQDIKSNGGLV
Subjt:  NQDIKSNGGLV

XP_023535133.1 mesenchyme-specific cell surface glycoprotein-like [Cucurbita pepo subsp. pepo]9.3e-3047.86Show/hide
Query:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSLPTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG
        MAVT++S LVGLLAFLCLSL SANR+LKNNDAE +L+ ++V S ++N  Q+ N+ ELKS+P  ++ K+SS+    GDC   G N        CG  G GG
Subjt:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSLPTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG

Query:  CGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQ--------GCQSC-----GCQA----------SMDDSKVEQDSVQTGEP
               G GG S     G GGGSS CQ C T S C WQGC G Q CQGCQ        GCQ C     GCQA          +++DSK++ +S+  GE 
Subjt:  CGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQ--------GCQSC-----GCQA----------SMDDSKVEQDSVQTGEP

Query:  APVVTIVPPAKPTDNDIKSSGGSNQDIKSNGGLV
               PP  P ++ IKSSGG+NQD+KSNGGLV
Subjt:  APVVTIVPPAKPTDNDIKSSGGSNQDIKSNGGLV

TrEMBL top hitse value%identityAlignment
A0A0A0L3F6 Uncharacterized protein5.7e-11099.05Show/hide
Query:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSLPTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG
        MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKS+PTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG
Subjt:  MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSLPTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGG

Query:  CGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEPAPVVTIVPPAKPTDNDIKSSGGS
        C GCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEPAPVVTIVPPAKPTDNDIKSSGGS
Subjt:  CGGCSGGGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEPAPVVTIVPPAKPTDNDIKSSGGS

Query:  NQDIKSNGGLV
        NQDIKSNGGLV
Subjt:  NQDIKSNGGLV

A0A1Y7VJ07 Predicted gene, 479594.2e-0461.54Show/hide
Query:  CGCGGCGGCGGCSG-GGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSC
        CGCGGCGGCGGC G GG GGC GC G GG GG   C  C  C  C   GC GC  C GC GC SC
Subjt:  CGCGGCGGCGGCSG-GGGGGCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTACAAGAACTAGTTTACTGGTTGGTCTCCTGGCGTTTCTTTGCTTAAGCCTCGGCTCTGCCAATCGAATTCTCAAGAACAACGATGCTGAAAACCAACTAAT
AGGTGACGATGTGCCTTCAGGAAAAGAAAACCACCCACAAAATTCCAACCATGATGAGTTGAAAAGTCTACCAACAGACAGCATGGCAAAAATCAGTTCCATTAATCCAA
TAAATGGCGATTGTTGCAGCTATGGCACCAATTGTGGAATATATCCACCACCGACCTGTGGATGCGGTGGATGCGGTGGATGCGGTGGATGCAGTGGTGGCGGAGGCGGT
GGATGCAGTGGATGCAGTGGTGGCGGCGGTGGCGGTGGAAGCTCTAGTTGCCAATCTTGCAATACTTGTTCTTCATGCCAATGGCAGGGATGTCATGGTTGCCAGGAATG
TCAAGGGTGCCAGGGATGCCAGAGTTGTGGGTGCCAAGCCAGCATGGACGATTCTAAGGTCGAACAGGATTCAGTTCAAACGGGTGAACCTGCACCCGTGGTGACAATTG
TGCCACCAGCCAAGCCAACAGATAATGACATAAAATCCAGTGGGGGATCAAATCAGGACATAAAATCCAATGGCGGTCTGGTTTAG
mRNA sequenceShow/hide mRNA sequence
AAAGTAGTCAACTTTCTCCTCAAAAGATAGACCAAAGTTTCAAGAAAATGGCTGTTACAAGAACTAGTTTACTGGTTGGTCTCCTGGCGTTTCTTTGCTTAAGCCTCGGC
TCTGCCAATCGAATTCTCAAGAACAACGATGCTGAAAACCAACTAATAGGTGACGATGTGCCTTCAGGAAAAGAAAACCACCCACAAAATTCCAACCATGATGAGTTGAA
AAGTCTACCAACAGACAGCATGGCAAAAATCAGTTCCATTAATCCAATAAATGGCGATTGTTGCAGCTATGGCACCAATTGTGGAATATATCCACCACCGACCTGTGGAT
GCGGTGGATGCGGTGGATGCGGTGGATGCAGTGGTGGCGGAGGCGGTGGATGCAGTGGATGCAGTGGTGGCGGCGGTGGCGGTGGAAGCTCTAGTTGCCAATCTTGCAAT
ACTTGTTCTTCATGCCAATGGCAGGGATGTCATGGTTGCCAGGAATGTCAAGGGTGCCAGGGATGCCAGAGTTGTGGGTGCCAAGCCAGCATGGACGATTCTAAGGTCGA
ACAGGATTCAGTTCAAACGGGTGAACCTGCACCCGTGGTGACAATTGTGCCACCAGCCAAGCCAACAGATAATGACATAAAATCCAGTGGGGGATCAAATCAGGACATAA
AATCCAATGGCGGTCTGGTTTAG
Protein sequenceShow/hide protein sequence
MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSLPTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGGCGGCSGGGGG
GCSGCSGGGGGGGSSSCQSCNTCSSCQWQGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEPAPVVTIVPPAKPTDNDIKSSGGSNQDIKSNGGLV