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CSPI04G23900 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G23900
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:21857904..21858353
RNA-Seq ExpressionCSPI04G23900
SyntenyCSPI04G23900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064365.1 hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]1.8e-3777.27Show/hide
Query:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA
        M TPSIKLISTF AILILSSTF++SHTQAR+ P +N D V I +D+H K  ETVAVAPLKS PLAFD DT F T + EVLGGDFRPTT GHSPGAGHSVA
Subjt:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA

Query:  PTSHMDSKIH
        PTSHMDSKIH
Subjt:  PTSHMDSKIH

KAG6591363.1 Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1957.84Show/hide
Query:  STFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFT-TSNAEVLGGDFRPTTPGHSPGAGHSVAPTSHMDSK
        S  +A LILSS  ++SHT  R+ P ++     I  +LH KI ET  VAPL S P AF R T      +AEVLGGDFRPTTPGHSPG GHS+AP SH+DSK
Subjt:  STFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFT-TSNAEVLGGDFRPTTPGHSPGAGHSVAPTSHMDSK

Query:  IH
        IH
Subjt:  IH

KAG7024239.1 Polyadenylate-binding protein RBP47C, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-1555.32Show/hide
Query:  VAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFT-TSNAEVLGGDFRPTTPGHSPGAGHSVAPTSHM
        +A LILSS  ++SHT  R+ P ++     I  + H KI ET  VAPL S P AF R T      +AEVLGGDFRPTTPGHSPG GHS+AP SH+
Subjt:  VAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFT-TSNAEVLGGDFRPTTPGHSPGAGHSVAPTSHM

KGN55172.1 hypothetical protein Csa_012400 [Cucumis sativus]4.1e-5399.09Show/hide
Query:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA
        MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEI KDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA
Subjt:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA

Query:  PTSHMDSKIH
        PTSHMDSKIH
Subjt:  PTSHMDSKIH

TYK20222.1 hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]1.7e-3879.09Show/hide
Query:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA
        M TPSIKLISTF AILILSSTF++SHTQAR+ P +N D V I +DLH K  ETVAVAPLKS PLAFD DT F T + EVLGGDFRPTTPGHSPGAGHSVA
Subjt:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA

Query:  PTSHMDSKIH
        PTSHMDSKIH
Subjt:  PTSHMDSKIH

TrEMBL top hitse value%identityAlignment
A0A0A0L3I5 Uncharacterized protein2.0e-5399.09Show/hide
Query:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA
        MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEI KDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA
Subjt:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA

Query:  PTSHMDSKIH
        PTSHMDSKIH
Subjt:  PTSHMDSKIH

A0A5A7VEP2 Uncharacterized protein8.9e-3877.27Show/hide
Query:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA
        M TPSIKLISTF AILILSSTF++SHTQAR+ P +N D V I +D+H K  ETVAVAPLKS PLAFD DT F T + EVLGGDFRPTT GHSPGAGHSVA
Subjt:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA

Query:  PTSHMDSKIH
        PTSHMDSKIH
Subjt:  PTSHMDSKIH

A0A5D3D9H8 Uncharacterized protein8.0e-3979.09Show/hide
Query:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA
        M TPSIKLISTF AILILSSTF++SHTQAR+ P +N D V I +DLH K  ETVAVAPLKS PLAFD DT F T + EVLGGDFRPTTPGHSPGAGHSVA
Subjt:  MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVA

Query:  PTSHMDSKIH
        PTSHMDSKIH
Subjt:  PTSHMDSKIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACTCCATCAATTAAGCTCATCTCTACCTTTGTTGCCATCCTCATTTTATCTTCTACCTTCCATGTATCACACACTCAAGCAAGAATGCCACCGACGAAGAATCT
CGATCGCGTAGAAATTTTCAAAGATCTCCATCCAAAAATTGAAGAAACAGTTGCCGTTGCTCCTCTTAAGTCGGAACCACTAGCATTTGATCGTGACACTTTCTTTACTA
CTAGCAACGCGGAGGTGCTAGGCGGCGACTTTCGCCCAACCACCCCGGGCCATAGCCCTGGGGCCGGTCACTCTGTTGCACCAACCAGCCACATGGATTCTAAAATACAT
TAA
mRNA sequenceShow/hide mRNA sequence
GGAATCATCCCAACACCTTTTCTCTTCTCTCTCATTTGAGTTATAACCTAAGATTTCTCTCCATTTCTCAAACAACTAAAATGAGTACTCCATCAATTAAGCTCATCTCT
ACCTTTGTTGCCATCCTCATTTTATCTTCTACCTTCCATGTATCACACACTCAAGCAAGAATGCCACCGACGAAGAATCTCGATCGCGTAGAAATTTTCAAAGATCTCCA
TCCAAAAATTGAAGAAACAGTTGCCGTTGCTCCTCTTAAGTCGGAACCACTAGCATTTGATCGTGACACTTTCTTTACTACTAGCAACGCGGAGGTGCTAGGCGGCGACT
TTCGCCCAACCACCCCGGGCCATAGCCCTGGGGCCGGTCACTCTGTTGCACCAACCAGCCACATGGATTCTAAAATACATTAAGATTAGATCATATTTTATAAATCACTT
ATTATACAAG
Protein sequenceShow/hide protein sequence
MSTPSIKLISTFVAILILSSTFHVSHTQARMPPTKNLDRVEIFKDLHPKIEETVAVAPLKSEPLAFDRDTFFTTSNAEVLGGDFRPTTPGHSPGAGHSVAPTSHMDSKIH