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CSPI04G24010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G24010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptioncalmodulin-like
Genome locationChr4:21926107..21926379
RNA-Seq ExpressionCSPI04G24010
SyntenyCSPI04G24010
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]2.3e-3890Show/hide
Query:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII
        MSR+SK Y+PRA+LSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLP YRARHAL HADSDRDGFI EKDFE LVNYAEQRQYT+I
Subjt:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3281.82Show/hide
Query:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYT
        M+RKSK Y PR KLSREQL +IFRNHD D DGRLSTTELT AFRYIGAFLP+YRA HALLH DSD DGFIGEKDFE LVNYAE+R+YT
Subjt:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYT

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3177.78Show/hide
Query:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII
        M+RK+K   PR KLSREQL +IFRNHD D DGRLS TELTEAFRYIGAFLP+YRA HAL + DSDRDGFIGEKDFESLVNY E+R YTI+
Subjt:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-3381.11Show/hide
Query:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII
        M+RKSK Y PR KLSREQL +IFRNHD D DGRLSTTELT AFRYIGAFLP+YRA HALLH DSD DGFIGEKDFE LVNYAE+R+YT+I
Subjt:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]5.3e-43100Show/hide
Query:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII
        MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII
Subjt:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein2.6e-43100Show/hide
Query:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII
        MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII
Subjt:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII

A0A5A7UYC0 Putative calcium-binding protein CML101.4e-1246.75Show/hide
Query:  RAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQY
        + +LSRE +  IFR HD D DGRLS +E+ +AF + G+ LP Y+A + + HAD + DG+I E++ + LV+YAE+ Q+
Subjt:  RAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQY

A0A5A7VDB9 Putative calcium-binding protein CML271.1e-3890Show/hide
Query:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII
        MSR+SK Y+PRA+LSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLP YRARHAL HADSDRDGFI EKDFE LVNYAEQRQYT+I
Subjt:  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII

A0A5N6RQV2 Uncharacterized protein2.8e-1353.33Show/hide
Query:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTI
        +R+QL+ IFR+HD D DG+LS  E+  AF Y+G+   +YRA  ALLHADSD DG++GE++ + LV+YA +  YTI
Subjt:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTI

W9RZZ8 Putative calcium-binding protein CML271.8e-1248.05Show/hide
Query:  RAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQY
        +A  + EQL  +F+ HD++KDG LS  ELT+AF  +G+F P++RA  AL H D +RDGF+ E +F  LV Y  Q  Y
Subjt:  RAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQY

SwissProt top hitse value%identityAlignment
Q39419 Polcalcin Bet v 46.0e-0535.82Show/hide
Query:  YPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDF
        +P+ K  RE+   IF+  D++ DG++S  EL EA + +G+  P    +H +   D+D DGFI  ++F
Subjt:  YPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDF

Q6L4D4 Probable calcium-binding protein CML152.3e-0431.88Show/hide
Query:  PRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESL
        PR   + ++   +FR  D++ DGR+S  EL   FR +G  +        +  ADSD DG+I   +F ++
Subjt:  PRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESL

Q8L3R2 Probable calcium-binding protein CML415.4e-0636.92Show/hide
Query:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLV
        S+E+L  +F + DSD DG++S  EL   F  +G ++    A+ A+   D+D DG +G +DF  L+
Subjt:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLV

Q9S744 Calmodulin-like protein 93.9e-0433.33Show/hide
Query:  EQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLV
        ++L+ +FR  D D DG +S  EL E  + +G  +    A H +  AD D DGF+   +F  ++
Subjt:  EQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLV

Arabidopsis top hitse value%identityAlignment
AT1G76650.1 calmodulin-like 382.3e-0428.99Show/hide
Query:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQ
        +L  +F   D+++DGR+S  EL ++F  +G  L    A  A+  +D+D DG +  ++F  L+   ++ +
Subjt:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQ

AT1G76650.3 calmodulin-like 382.3e-0428.99Show/hide
Query:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQ
        +L  +F   D+++DGR+S  EL ++F  +G  L    A  A+  +D+D DG +  ++F  L+   ++ +
Subjt:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQ

AT3G50770.1 calmodulin-like 413.9e-0736.92Show/hide
Query:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLV
        S+E+L  +F + DSD DG++S  EL   F  +G ++    A+ A+   D+D DG +G +DF  L+
Subjt:  SREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLV

AT3G51920.1 calmodulin 92.8e-0533.33Show/hide
Query:  EQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLV
        ++L+ +FR  D D DG +S  EL E  + +G  +    A H +  AD D DGF+   +F  ++
Subjt:  EQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLV

AT4G03290.1 EF hand calcium-binding protein family8.9e-0429.51Show/hide
Query:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESL
        +L  +F+  D D DG+++T EL E+F+ +G  +P       +   D + DG +  ++F  L
Subjt:  QLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGAAAAAGCAAAAACTACTACCCAAGGGCAAAGCTATCAAGAGAACAGTTACTTCTGATCTTCAGAAACCATGACAGCGACAAGGACGGCCGTCTCAGCACCAC
CGAGCTCACTGAAGCCTTCCGATATATCGGTGCCTTTCTCCCGACCTACCGAGCTCGCCACGCTCTTCTTCATGCCGACTCTGACAGAGATGGATTCATCGGCGAGAAGG
ATTTCGAGTCACTTGTTAATTATGCTGAGCAACGCCAATATACCATCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGAAAAAGCAAAAACTACTACCCAAGGGCAAAGCTATCAAGAGAACAGTTACTTCTGATCTTCAGAAACCATGACAGCGACAAGGACGGCCGTCTCAGCACCAC
CGAGCTCACTGAAGCCTTCCGATATATCGGTGCCTTTCTCCCGACCTACCGAGCTCGCCACGCTCTTCTTCATGCCGACTCTGACAGAGATGGATTCATCGGCGAGAAGG
ATTTCGAGTCACTTGTTAATTATGCTGAGCAACGCCAATATACCATCATTTGA
Protein sequenceShow/hide protein sequence
MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALLHADSDRDGFIGEKDFESLVNYAEQRQYTII