; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G24090 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G24090
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCold regulated protein 27
Genome locationChr4:21992401..21994764
RNA-Seq ExpressionCSPI04G24090
SyntenyCSPI04G24090
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649861.1 hypothetical protein Csa_012756 [Cucumis sativus]2.9e-12899.58Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGP+RASDSDLSQQYISNN
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ
        KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ

XP_008452552.1 PREDICTED: uncharacterized protein LOC103493542 [Cucumis melo]3.1e-10991.96Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLP NLD+LN RE R+DSLVSEFVKD STEF RPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCP+KDNSSRTKLLSKSQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHF+AARKNKNV CKSQAIGSRGRNSLSL AANNSGP+RAS+SDLSQQYIS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNA
        KEVSDQNFVDEV+EVEKGS DCNA
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNA

XP_011654107.2 cold-regulated protein 27 [Cucumis sativus]4.5e-12999.17Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGP+RASDSDLSQQYISNN
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVI
        KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV+
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVI

XP_038896198.1 cold-regulated protein 27 isoform X1 [Benincasa hispida]3.9e-10482.5Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLP NL++L   ETR+DS+VSEF KD+STEF+ P+ SSS+GTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDS HSVGSCP+K+NSSR KLL +SQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFEPTESRSN LN+YQALSHNPWIHHFRAARKNKNV CKSQ+IGSRGRNSL  GAANNSG +RASDSDLSQQ+IS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV
        KEVSDQNFVDE  E EKGS DCNAKR    +TNALINDQV
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV

XP_038896200.1 cold-regulated protein 27 isoform X3 [Benincasa hispida]1.1e-10382.43Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLP NL++L   ETR+DS+VSEF KD+STEF+ P+ SSS+GTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDS HSVGSCP+K+NSSR KLL +SQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFEPTESRSN LN+YQALSHNPWIHHFRAARKNKNV CKSQ+IGSRGRNSL  GAANNSG +RASDSDLSQQ+IS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ
        KEVSDQNFVDE  E EKGS DCNAKR    +TNALINDQ
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ

TrEMBL top hitse value%identityAlignment
A0A0A0L0A2 Polyketide_cyc domain-containing protein1.4e-12899.17Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGP+RASDSDLSQQYISNN
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV
        KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ+
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV

A0A1S3BU49 uncharacterized protein LOC1034935421.5e-10991.96Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLP NLD+LN RE R+DSLVSEFVKD STEF RPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCP+KDNSSRTKLLSKSQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHF+AARKNKNV CKSQAIGSRGRNSLSL AANNSGP+RAS+SDLSQQYIS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNA
        KEVSDQNFVDEV+EVEKGS DCNA
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNA

A0A6J1F6L8 uncharacterized protein LOC111442637 isoform X11.1e-9678.51Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLPPNL++ N  ETR DSL+SE  KD+STEF+ P+ESSS GTHMTDSVPSDWTDEKHHLFLESME SFVSQMFDS HSVGSCP K+NSS TKL  +SQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFE TESRSN LN++QALS NPWIHHFRA RKNKNV CKSQAIGS GRN   LGAAN+S PLRA DSDLS QYIS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDC-NAKRANASETNALINDQVI
        +EVSDQNFVDE  EV  GS DC NAKR N  ETNALIN+Q I
Subjt:  KEVSDQNFVDEVIEVEKGSIDC-NAKRANASETNALINDQVI

A0A6J1FBV0 uncharacterized protein LOC111442637 isoform X21.9e-9678.75Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLPPNL++ N  ETR DSL+SE  KD+STEF+ P+ESSS GTHMTDSVPSDWTDEKHHLFLESME SFVSQMFDS HSVGSCP K+NSS TKL  +SQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFE TESRSN LN++QALS NPWIHHFRA RKNKNV CKSQAIGS GRN   LGAAN+S PLRA DSDLS QYIS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDC-NAKRANASETNALINDQ
        +EVSDQNFVDE  EV  GS DC NAKR N  ETNALIN+Q
Subjt:  KEVSDQNFVDEVIEVEKGSIDC-NAKRANASETNALINDQ

A0A6J1IFL9 uncharacterized protein LOC111476815 isoform X12.7e-9577.59Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLPPNL++    ETR D L+SE  KD STEF+ P+ESSS GTHMTDSVPSDWTDEKHHLFLESME SFVSQMFDS HSVGSCP K+NSS TKL  +SQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN
        SASH H+ FGQFKVLRRGSWKNINFE TESRSN LN++QALS NPWIHHFRA RKNKNV CKSQAIGS GRN   LGAANNS PLRA  SDLS QYIS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVI
        +EVSDQNFVDE  EV  GS DCNAKR N  ETNALIN+Q I
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVI

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 272.8e-1231.56Show/hide
Query:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN
        D S++ +  +E   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       QFKVL  G W+ IN
Subjt:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN

Query:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNVVC---KSQAI-GSRGRNSL-SLGAANNSGPLRASDSDLSQQYISNNKEVSDQNFVDEVIEVE
         +  E R N     N ++ L  +PWI H++   K +  V    ++Q +  S G+  + S G+A++   L +   D  Q  +    EVSDQNFV+E I+ E
Subjt:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNVVC---KSQAI-GSRGRNSL-SLGAANNSGPLRASDSDLSQQYISNNKEVSDQNFVDEVIEVE

Query:  KGSIDCNAKRANASETNALINDQVI
         GS   + K      + +   DQV+
Subjt:  KGSIDCNAKRANASETNALINDQVI

Q8L983 Cold-regulated protein 283.3e-0525.77Show/hide
Query:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA
        WT+EKH+ +L+ +E+SFV Q++                 T+ LS+++   S+ H    QF VL+ G W+ +NF   +S     +E++        H    
Subjt:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA

Query:  ARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRAS---DSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVIQV
                          RNSL     N++G          D+     + + E S QNF +E  E EKG +    +R   ++ ++L  DQV+ V
Subjt:  ARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRAS---DSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVIQV

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)2.3e-0625.77Show/hide
Query:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA
        WT+EKH+ +L+ +E+SFV Q++                 T+ LS+++   S+ H    QF VL+ G W+ +NF   +S     +E++        H    
Subjt:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA

Query:  ARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRAS---DSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVIQV
                          RNSL     N++G          D+     + + E S QNF +E  E EKG +    +R   ++ ++L  DQV+ V
Subjt:  ARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRAS---DSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVIQV

AT4G33980.2 FUNCTIONS IN: molecular_function unknown2.3e-0625.77Show/hide
Query:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA
        WT+EKH+ +L+ +E+SFV Q++                 T+ LS+++   S+ H    QF VL+ G W+ +NF   +S     +E++        H    
Subjt:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA

Query:  ARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRAS---DSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVIQV
                          RNSL     N++G          D+     + + E S QNF +E  E EKG +    +R   ++ ++L  DQV+ V
Subjt:  ARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRAS---DSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVIQV

AT5G42900.1 cold regulated gene 272.0e-1331.56Show/hide
Query:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN
        D S++ +  +E   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       QFKVL  G W+ IN
Subjt:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN

Query:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNVVC---KSQAI-GSRGRNSL-SLGAANNSGPLRASDSDLSQQYISNNKEVSDQNFVDEVIEVE
         +  E R N     N ++ L  +PWI H++   K +  V    ++Q +  S G+  + S G+A++   L +   D  Q  +    EVSDQNFV+E I+ E
Subjt:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNVVC---KSQAI-GSRGRNSL-SLGAANNSGPLRASDSDLSQQYISNNKEVSDQNFVDEVIEVE

Query:  KGSIDCNAKRANASETNALINDQVI
         GS   + K      + +   DQV+
Subjt:  KGSIDCNAKRANASETNALINDQVI

AT5G42900.2 cold regulated gene 272.0e-1331.56Show/hide
Query:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN
        D S++ +  +E   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       QFKVL  G W+ IN
Subjt:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN

Query:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNVVC---KSQAI-GSRGRNSL-SLGAANNSGPLRASDSDLSQQYISNNKEVSDQNFVDEVIEVE
         +  E R N     N ++ L  +PWI H++   K +  V    ++Q +  S G+  + S G+A++   L +   D  Q  +    EVSDQNFV+E I+ E
Subjt:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNVVC---KSQAI-GSRGRNSL-SLGAANNSGPLRASDSDLSQQYISNNKEVSDQNFVDEVIEVE

Query:  KGSIDCNAKRANASETNALINDQVI
         GS   + K      + +   DQV+
Subjt:  KGSIDCNAKRANASETNALINDQVI

AT5G42900.3 cold regulated gene 273.0e-1432.44Show/hide
Query:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN
        D S++ +  +E   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       QFKVL  G W+ IN
Subjt:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN

Query:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNVVC---KSQAI-GSRGRNSL-SLGAANNSGPLRASDSDLSQQYISNNKEVSDQNFVDEVIEVE
         +  E R N     N ++ L  +PWI H++   K +  V    ++Q +  S G+  + S G+A++   L +   D  Q  IS  +EVSDQNFV+E I+ E
Subjt:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNVVC---KSQAI-GSRGRNSL-SLGAANNSGPLRASDSDLSQQYISNNKEVSDQNFVDEVIEVE

Query:  KGSIDCNAKRANASETNALINDQVI
         GS   + K      + +   DQV+
Subjt:  KGSIDCNAKRANASETNALINDQVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGTTGCCTCCAAATTTGGACAGTCTCAACCCTAGAGAAACTCGTGCTGACTCACTTGTTTCTGAATTCGTCAAGGACCAGTCTACCGAGTTTTCCCGCCCGAT
TGAATCTTCTAGCCGGGGCACTCATATGACGGATTCTGTACCTTCTGATTGGACCGACGAGAAGCACCATTTGTTTCTTGAATCCATGGAAGCATCATTTGTCAGCCAAA
TGTTTGATTCTGGGCATTCTGTTGGCTCCTGCCCCACCAAGGATAATTCTTCACGCACAAAATTGCTCAGCAAAAGCCAGTCCGCCTCTCACGGCCATTCACAGTTTGGC
CAGTTTAAGGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCAACTGAATCTCGATCAAATTTTTTGAATGAATACCAAGCTCTCTCACATAATCCTTGGAT
ACATCACTTTAGAGCTGCTCGTAAAAACAAAAATGTCGTTTGCAAAAGTCAAGCTATCGGTTCAAGAGGAAGAAACTCGTTGTCATTAGGAGCAGCTAATAATTCAGGAC
CTCTACGTGCTTCCGACTCTGATTTGTCCCAACAATATATCAGCAATAATAAAGAAGTTTCGGATCAGAACTTTGTTGATGAAGTTATAGAAGTTGAAAAGGGAAGCATT
GATTGCAATGCCAAAAGGGCCAACGCATCAGAAACAAATGCTTTGATCAATGACCAGGTAATTCAAGTGATATCAACTTAA
mRNA sequenceShow/hide mRNA sequence
CATGACAACTGTGAAGGTTCTTTCGTCCCAAGAACACCGCCTCTCTCTCTCTCTCTCTCCTCTTCAATATCTCTCCCACTGGCCCGCTTCCATCTTTCTTCCCTTCATCT
CTCTCTCGCCATTGCAAATCTGGAGATAATCCTTCTTCCTCTTCCCCATTCATGGAATTGTTGCCTCCAAATTTGGACAGTCTCAACCCTAGAGAAACTCGTGCTGACTC
ACTTGTTTCTGAATTCGTCAAGGACCAGTCTACCGAGTTTTCCCGCCCGATTGAATCTTCTAGCCGGGGCACTCATATGACGGATTCTGTACCTTCTGATTGGACCGACG
AGAAGCACCATTTGTTTCTTGAATCCATGGAAGCATCATTTGTCAGCCAAATGTTTGATTCTGGGCATTCTGTTGGCTCCTGCCCCACCAAGGATAATTCTTCACGCACA
AAATTGCTCAGCAAAAGCCAGTCCGCCTCTCACGGCCATTCACAGTTTGGCCAGTTTAAGGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCAACTGAATC
TCGATCAAATTTTTTGAATGAATACCAAGCTCTCTCACATAATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAAAATGTCGTTTGCAAAAGTCAAGCTATCG
GTTCAAGAGGAAGAAACTCGTTGTCATTAGGAGCAGCTAATAATTCAGGACCTCTACGTGCTTCCGACTCTGATTTGTCCCAACAATATATCAGCAATAATAAAGAAGTT
TCGGATCAGAACTTTGTTGATGAAGTTATAGAAGTTGAAAAGGGAAGCATTGATTGCAATGCCAAAAGGGCCAACGCATCAGAAACAAATGCTTTGATCAATGACCAGGT
AATTCAAGTGATATCAACTTAAC
Protein sequenceShow/hide protein sequence
MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFG
QFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAANNSGPLRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSI
DCNAKRANASETNALINDQVIQVIST