; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G24460 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G24460
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein DCL, chloroplastic
Genome locationChr4:22212631..22217718
RNA-Seq ExpressionCSPI04G24460
SyntenyCSPI04G24460
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649869.1 hypothetical protein Csa_012968 [Cucumis sativus]1.6e-111100Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
        SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
Subjt:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS

KAG6608449.1 Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.7e-8980.1Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        M AS L RGHPL+RLGL+ RG CTGIVQVT R CC+A  ASTP  G L++ +N TSV+S ++PPKY RWDEP YRKWKNQEEEIL DI+P+I LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
        S+RY DGERLT EDE+ VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFR SRC FVIRTDGGWIDFSYQKCLRAYIRNKYP +AERFIREHFKRGS
Subjt:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS

XP_004141276.2 protein DCL, chloroplastic [Cucumis sativus]1.1e-118100Show/hide
Query:  MLSSQLLSTRTFVILMAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEIL
        MLSSQLLSTRTFVILMAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEIL
Subjt:  MLSSQLLSTRTFVILMAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEIL

Query:  GDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAE
        GDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAE
Subjt:  GDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAE

Query:  RFIREHFKRGS
        RFIREHFKRGS
Subjt:  RFIREHFKRGS

XP_008452601.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]1.8e-10595.41Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAASFLFRGHPLLRLGLKRRG CTG+VQVT R CCSAT ASTPSDGDLTAGDNATS+VS SEPPKY RWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
        SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFR SRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
Subjt:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS

XP_022135338.1 protein DCL, chloroplastic isoform X1 [Momordica charantia]1.4e-9183.67Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAAS L RGHPLLRLGL+ RG CTGIVQVT R CC+ATAA TP DG+LT+ +N TSV+S S+PPKY RWDEPDYRKWK+QEEE+L DIEPII LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
        S+RY DGERLT  DER VV+RLLAHHPHAEDKIGCGLESIMVDRHPQFR SRC FVIRTDGGWIDFSYQKCLRAYIRNKYPS+AERFIREHFKRGS
Subjt:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS

TrEMBL top hitse value%identityAlignment
A0A0A0L0D6 Uncharacterized protein5.2e-119100Show/hide
Query:  MLSSQLLSTRTFVILMAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEIL
        MLSSQLLSTRTFVILMAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEIL
Subjt:  MLSSQLLSTRTFVILMAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEIL

Query:  GDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAE
        GDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAE
Subjt:  GDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAE

Query:  RFIREHFKRGS
        RFIREHFKRGS
Subjt:  RFIREHFKRGS

A0A1S3BU88 protein DCL, chloroplastic8.5e-10695.41Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAASFLFRGHPLLRLGLKRRG CTG+VQVT R CCSAT ASTPSDGDLTAGDNATS+VS SEPPKY RWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
        SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFR SRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
Subjt:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS

A0A6J1C4J4 protein DCL, chloroplastic isoform X17.0e-9283.67Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAAS L RGHPLLRLGL+ RG CTGIVQVT R CC+ATAA TP DG+LT+ +N TSV+S S+PPKY RWDEPDYRKWK+QEEE+L DIEPII LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
        S+RY DGERLT  DER VV+RLLAHHPHAEDKIGCGLESIMVDRHPQFR SRC FVIRTDGGWIDFSYQKCLRAYIRNKYPS+AERFIREHFKRGS
Subjt:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS

A0A6J1FNQ4 protein DCL homolog, chloroplastic-like2.8e-8879.59Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        M AS L RGHPL+RLGL+ RG C GIVQVT R CC+A  ASTP  G L++ +N TSV+S ++PPKY RW+EP YRKWKNQEEEIL DI+PII LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
        S+RY DGERLT EDE+ VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFR SRC FVIRTDGGWIDFSYQKCLRAYIRNKYP +AERFIREHFKRGS
Subjt:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS

A0A6J1J4G4 protein DCL homolog, chloroplastic-like isoform X11.2e-8879.59Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        M AS L RGHPL+RLGL+ RG CTGI+QVT R CC+A  ASTP  G L++ +N TSV+S ++PPKY RWDEP YRKWKNQEEEIL DI+PII LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS
        S+RY DGERLT EDE+ VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFR SRC FVIRTDGGWIDFSYQKCLRAYIRNKYP +A+RFIREHFKRGS
Subjt:  SHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS

SwissProt top hitse value%identityAlignment
Q42463 Protein DCL, chloroplastic1.4e-2836.72Show/hide
Query:  CSATAASTPSDGDLTAGDNA---------TSVVSVSEPPKYLRWDEPDY--------RKWKNQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERT
        C   A  T S+G     DNA         T + + SE  + ++ +  D           W + E++IL D  P++   + ILHS +YA G+RL+ + +RT
Subjt:  CSATAASTPSDGDLTAGDNA---------TSVVSVSEPPKYLRWDEPDY--------RKWKNQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERT

Query:  VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        ++ RLL +HP  + KIG G++ I V  HP F  SRC F++R DG  +DFSY KC++  IR  YP +A+ FI  HF++
Subjt:  VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Q5D869 DNA-directed RNA polymerase V subunit 17.1e-2542.24Show/hide
Query:  NQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRN
        ++E+E+L D+EP++   ++I+H   Y DG+ ++ +D+  V++++L  HP  E K+G G++ I VD+H  F  SRCFFV+ TDG   DFSY+K L  Y+  
Subjt:  NQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRN

Query:  KYPSFAERFIREHFKR
        KYP  AE FI ++F +
Subjt:  KYPSFAERFIREHFKR

Q8L557 Protein EMBRYO DEFECTIVE 5141.3e-0530.19Show/hide
Query:  RKWKNQEEEILGDIE--PIIFLTKEILHS------HRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDF
        +K K  EEE  G ++  P  F+T   +        H +     +   +   ++D +   H   E KIG G+++  V  HP ++ SRCFF++R D    DF
Subjt:  RKWKNQEEEILGDIE--PIIFLTKEILHS------HRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDF

Query:  SYQKCL
        S++KC+
Subjt:  SYQKCL

Q9C642 Protein DCL homolog, chloroplastic8.1e-2947.37Show/hide
Query:  EEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKY
        E++IL    P++   + ILHS +YA+ +RL+ E ERT+++ LL +HP  E KIGCG++ IMV  HP F  SRC F++R DG  +DFSY KC++  I+ KY
Subjt:  EEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKY

Query:  PSFAERFIREHFKR
        P +A+ FI  HF++
Subjt:  PSFAERFIREHFKR

Q9LQ02 DNA-directed RNA polymerase IV subunit 13.9e-0734.17Show/hide
Query:  WKNQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYI
        WKN        IE +    K ILHS  Y   E L   DE  +V  +L  HP++ +KIG G++ I V +  +   S CF V+R DG + DFSY KC+    
Subjt:  WKNQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYI

Query:  RNKYPSFAERFIREHFKRGS
        +   P     +  ++ K G+
Subjt:  RNKYPSFAERFIREHFKRGS

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)5.8e-3047.37Show/hide
Query:  EEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKY
        E++IL    P++   + ILHS +YA+ +RL+ E ERT+++ LL +HP  E KIGCG++ IMV  HP F  SRC F++R DG  +DFSY KC++  I+ KY
Subjt:  EEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKY

Query:  PSFAERFIREHFKR
        P +A+ FI  HF++
Subjt:  PSFAERFIREHFKR

AT1G45230.2 Protein of unknown function (DUF3223)1.3e-2947.37Show/hide
Query:  EEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKY
        E++IL    P++   + ILHS +YA+ +RL+ E ERT+++ LL +HP  E KIGCG++ IMV  HP F  SRC F++R DG  +DFSY KC++  I+ KY
Subjt:  EEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKY

Query:  PSFAERFIREHFKR
        P +A+ FI  HF++
Subjt:  PSFAERFIREHFKR

AT1G63020.1 nuclear RNA polymerase D1A2.8e-0834.17Show/hide
Query:  WKNQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYI
        WKN        IE +    K ILHS  Y   E L   DE  +V  +L  HP++ +KIG G++ I V +  +   S CF V+R DG + DFSY KC+    
Subjt:  WKNQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYI

Query:  RNKYPSFAERFIREHFKRGS
        +   P     +  ++ K G+
Subjt:  RNKYPSFAERFIREHFKRGS

AT2G40030.1 nuclear RNA polymerase D1B5.1e-2642.24Show/hide
Query:  NQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRN
        ++E+E+L D+EP++   ++I+H   Y DG+ ++ +D+  V++++L  HP  E K+G G++ I VD+H  F  SRCFFV+ TDG   DFSY+K L  Y+  
Subjt:  NQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRN

Query:  KYPSFAERFIREHFKR
        KYP  AE FI ++F +
Subjt:  KYPSFAERFIREHFKR

AT3G46630.1 Protein of unknown function (DUF3223)2.3e-5857.14Show/hide
Query:  MAASFLFRGHPLLRLG-LKRRGQ----CTGIVQVTCRFCCSA---------TAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILG
        M +  L R  PLLR G L  R Q      GI+    R  CS            + +P +G   A  N TS V  +      R+++PDYRKWKN E EIL 
Subjt:  MAASFLFRGHPLLRLG-LKRRGQ----CTGIVQVTCRFCCSA---------TAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILG

Query:  DIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAER
        DIEPI  L KEILHS RY DGERL  EDE+ V+++LL +HP+++DKIGCGL+ IMVDRHPQFR SRC FV+RTDGGWIDFSYQKCLRAY+R+KYPS AER
Subjt:  DIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAER

Query:  FIREHFKRGS
        FIREHFKR S
Subjt:  FIREHFKRGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAGCTCTCAGCTGCTCTCCACACGAACGTTTGTGATCCTCATGGCTGCTTCTTTTCTTTTCAGAGGTCATCCGCTCCTGCGGTTAGGGCTTAAGCGCCGGGGGCA
GTGTACTGGGATTGTGCAAGTGACTTGCCGGTTTTGCTGCAGTGCGACTGCGGCGTCTACTCCATCGGACGGCGACTTAACAGCTGGTGATAATGCTACCTCAGTGGTGA
GTGTCAGTGAGCCACCAAAGTACCTAAGATGGGACGAGCCTGATTATCGAAAGTGGAAGAACCAGGAGGAGGAAATTCTTGGCGATATTGAGCCTATCATATTCCTCACT
AAAGAGATCCTCCACTCCCATAGGTATGCGGATGGGGAGCGACTGACATTGGAGGATGAGAGAACTGTGGTAGACAGACTTCTGGCACATCATCCACATGCTGAAGATAA
AATTGGATGTGGACTTGAATCCATCATGGTTGATCGGCATCCCCAATTTCGGCAATCAAGATGCTTCTTTGTTATAAGGACCGATGGTGGATGGATTGACTTCTCATATC
AAAAATGTCTTCGGGCATATATCCGAAATAAATACCCATCGTTTGCAGAGCGGTTTATTCGCGAGCATTTCAAACGTGGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
GTAAAGCCCAATAACCCGAGACGAAGGCACCTTCGTCCAGTCACTTCATGCTCAGCTCTCAGCTGCTCTCCACACGAACGTTTGTGATCCTCATGGCTGCTTCTTTTCTT
TTCAGAGGTCATCCGCTCCTGCGGTTAGGGCTTAAGCGCCGGGGGCAGTGTACTGGGATTGTGCAAGTGACTTGCCGGTTTTGCTGCAGTGCGACTGCGGCGTCTACTCC
ATCGGACGGCGACTTAACAGCTGGTGATAATGCTACCTCAGTGGTGAGTGTCAGTGAGCCACCAAAGTACCTAAGATGGGACGAGCCTGATTATCGAAAGTGGAAGAACC
AGGAGGAGGAAATTCTTGGCGATATTGAGCCTATCATATTCCTCACTAAAGAGATCCTCCACTCCCATAGGTATGCGGATGGGGAGCGACTGACATTGGAGGATGAGAGA
ACTGTGGTAGACAGACTTCTGGCACATCATCCACATGCTGAAGATAAAATTGGATGTGGACTTGAATCCATCATGGTTGATCGGCATCCCCAATTTCGGCAATCAAGATG
CTTCTTTGTTATAAGGACCGATGGTGGATGGATTGACTTCTCATATCAAAAATGTCTTCGGGCATATATCCGAAATAAATACCCATCGTTTGCAGAGCGGTTTATTCGCG
AGCATTTCAAACGTGGTAGTTGATGAATTTATGCTATCGTTGATGTTGAGCTGTGGTTTAAATGAATTAGTTTTAATCAAGAGAGATGTATGAATGATAAGGGTATGTTT
GGTTTGCAACTAAATTCTGTTTATGTTCACAGACTTACCGAGCTGTAAATATGGTAGGCAACCCCAA
Protein sequenceShow/hide protein sequence
MLSSQLLSTRTFVILMAASFLFRGHPLLRLGLKRRGQCTGIVQVTCRFCCSATAASTPSDGDLTAGDNATSVVSVSEPPKYLRWDEPDYRKWKNQEEEILGDIEPIIFLT
KEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS