; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G24640 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G24640
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1
Genome locationChr4:22309134..22311814
RNA-Seq ExpressionCSPI04G24640
SyntenyCSPI04G24640
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141282.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X2 [Cucumis sativus]1.4e-44100Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
XP_008452624.1 PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucumis melo]1.7e-4295.88Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFD+KDQNQSYD+KDSKD SRNSRK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
XP_022159826.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X1 [Momordica charantia]1.6e-4091.75Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQG+EFD KDQNQSYD KDS DLSR+S++V
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
XP_022937244.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita moschata]3.7e-4295.83Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRK
        MVLTNFNGAGVGFGFG+GCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME DNKDQNQSYD KDSKDLSRNSRK
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRK
XP_022977146.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita maxima]8.3e-4294.79Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRK
        MVLTNFNGAGVGFGFG+GCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME DNKDQNQ+YD KDSKDLSRNSRK
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRK
TrEMBL top hitse value%identityAlignment
A0A0A0L0F8 Uncharacterized protein6.6e-45100Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
A0A1S3BVF8 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X18.1e-4395.88Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFD+KDQNQSYD+KDSKD SRNSRK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
A0A6J1E543 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X17.6e-4191.75Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQG+EFD KDQNQSYD KDS DLSR+S++V
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV
A0A6J1F9U6 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X11.8e-4295.83Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRK
        MVLTNFNGAGVGFGFG+GCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME DNKDQNQSYD KDSKDLSRNSRK
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRK
A0A6J1IHM9 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X14.0e-4294.79Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRK
        MVLTNFNGAGVGFGFG+GCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME DNKDQNQ+YD KDSKDLSRNSRK
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRK
SwissProt top hitse value%identityAlignment
Q8VY77 Protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic2.4e-2870.79Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKD
        MVL++F G GVGFGFGVGCGFG+GWGFGGMP+N LG+GAGGGCGVGLGLGWGFGTAFGS YRSSR+ FQG+E +  D+ +      SK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKD
Arabidopsis top hitse value%identityAlignment
AT1G27695.1 glycine-rich protein1.7e-2970.79Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKD
        MVL++F G GVGFGFGVGCGFG+GWGFGGMP+N LG+GAGGGCGVGLGLGWGFGTAFGS YRSSR+ FQG+E +  D+ +      SK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKD
AT1G27695.2 glycine-rich protein1.7e-2970.79Show/hide
Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKD
        MVL++F G GVGFGFGVGCGFG+GWGFGGMP+N LG+GAGGGCGVGLGLGWGFGTAFGS YRSSR+ FQG+E +  D+ +      SK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKD
AT4G10330.1 glycine-rich protein7.3e-0448.48Show/hide
Query:  GVGFGFGVGCGFGI------GWGFG-GMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIF
        G  FG GVGCGFG       G GFG G+P    GLG G GCG+G+G G+G G   G+ Y  SR  +
Subjt:  GVGFGFGVGCGFGI------GWGFG-GMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTCACCAACTTCAATGGAGCTGGCGTTGGATTCGGTTTTGGTGTCGGTTGTGGGTTCGGCATAGGATGGGGTTTCGGAGGAATGCCTTTGAACTTCTTGGGCCT
TGGCGCGGGTGGTGGGTGTGGCGTTGGATTAGGACTTGGATGGGGATTTGGCACAGCTTTCGGGAGTAAGTATCGGTCCTCAAGGATGATATTTCAGGGAATGGAATTTG
ACAACAAGGATCAAAATCAGAGTTATGATATGAAGGACTCAAAAGATTTATCCAGAAATTCCAGAAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
AATAAAGTTAAAGTTCTTGACATCCCCTCGTTTCTTTTGAAATTGGAAGTTTATCCCCAAAATTTATACGGATTGTTCTACAAAAGAAATAAAACTTATTGTGGGCTTTC
ATTAAACAAAATCCCTTATCGCTGCCGCTGAGGTATACAATGAAACCGTTCGATCTCAACATCTCTTTCCGTTCGTGCTAATTGTCGTTTTTTCTACTTCATTCTTGATT
CCACTCGTTATCGGCTTTCTCCGTCTGTGGCGCCTCAGCTTCGAGCAATGGTACTCACCAACTTCAATGGAGCTGGCGTTGGATTCGGTTTTGGTGTCGGTTGTGGGTTC
GGCATAGGATGGGGTTTCGGAGGAATGCCTTTGAACTTCTTGGGCCTTGGCGCGGGTGGTGGGTGTGGCGTTGGATTAGGACTTGGATGGGGATTTGGCACAGCTTTCGG
GAGTAAGTATCGGTCCTCAAGGATGATATTTCAGGGAATGGAATTTGACAACAAGGATCAAAATCAGAGTTATGATATGAAGGACTCAAAAGATTTATCCAGAAATTCCA
GAAAAGTTTGAGCTTAATAGCTAGTTTAAATCCTTTGAACTCTTTTTGGATGGAATTGTGACAACATCTGATCGTATACTTGCACCGCACTACATCTGATTGTATAGAAA
TTACCTTTCTTTTGTCCACTAATTTTTCAGAAAAACAGTAAAGTTTATAAATCTCTTAACCGTAAGGTCACTCACGATCTCTGCACCAATCTTCATGCGGATTGTGCTTT
CAACCAGAATTACTTTGCATGGTTTCAAAAGCTTGGTCATGTGATCCATGGCGGCTACTTTGTTCGTTCTATTGCCTTCTTATATATATGTAGCGTTATTTTTTCTTCCA
TCGTGCAGTTGCAATTAGTTGGCAAATAGACATGACAAGAAATTGTTTGATTTCACGGGGGCACATCCTTTTCTGTCTTTTCCTCTTCAATAATATTCTTGACGCTG
Protein sequenceShow/hide protein sequence
MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMIFQGMEFDNKDQNQSYDMKDSKDLSRNSRKV