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CSPI04G24670 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G24670
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRan-binding protein like
Genome locationChr4:22314979..22316231
RNA-Seq ExpressionCSPI04G24670
SyntenyCSPI04G24670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3975031.1 hypothetical protein CMV_001685 [Castanea mollissima]1.5e-1856.47Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL
        MEWW K+  P+R     VA RLG RK GL+KL  DV  CEYEDV VMWEMLKR+ET+Q+I     + K++S WNIF WA   P L
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL

KAF7819640.1 elongation factor [Senna tora]5.3e-1955.29Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL
        ME W K+  P+RS   RVA RLG RK GL+KL  DV+ACEY+D+HVMW ML+RN  D +  S E+ +KR++ W +F WAR APC+
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL

KAG6591414.1 hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sororia]7.1e-2466.67Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARS
        M WW +M++PLR F+FR+A RLGFRKRGL+KLGRDV+ACEY DV VMWEM+KRNE  +++G  ERR+KR+SL NI WW  S
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARS

KAG6608437.1 hypothetical protein SDJN03_01779, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3274.42Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLG
        MEWWIK+++PLR FT RVA RLG+RKRGL+KLGRDVKACEYEDVHVMWEMLKRNET+ +     RR+K++ +WNIFWWARSAPC+G
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLG

KAG7024293.1 hypothetical protein SDJN02_13107, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2665.12Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLG
        M WW +M++PLR F+FR+A RLGFRKRGL+KLGRDV+ACEY DV VMWEM+KRNE  +++G  ERR+KR+SL NI WW  S  C+G
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLG

TrEMBL top hitse value%identityAlignment
A0A059BJK4 Uncharacterized protein8.2e-1855.29Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL
        M  W +   PL++    VA RLG RK G +KL  DV+ CEY+DVHVMWEML+RNE +  I  S RR K +S W+IF WAR APCL
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL

A0A0A0L522 Uncharacterized protein7.1e-46100Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLGKI
        MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLGKI
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLGKI

A0A218WD46 uncharacterized protein LOC1162151546.3e-1856.47Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL
        ++ W KM  PLR+    VA RLG R RGL+KL +DV+ CEY+DVHVMW MLK+NET+    S +RR+KR S W+ F WAR AP L
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL

A0A7N2RF01 Uncharacterized protein2.3e-2057.65Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL
        MEWW K+  P+R     VA RLG RK GL+KL  DV  CEYEDV VMWEMLKR+ET+Q++     + K++S WNIF WAR  PCL
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCL

B9R721 Uncharacterized protein6.3e-1850.57Show/hide
Query:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLGK
        MEWW K+  P+R     VA R+G RKRGL+KL  DV+ACEYEDV +MWEML+R ET+    S   + K++  W  F WAR +P  G+
Subjt:  MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43150.1 unknown protein5.4e-1442.67Show/hide
Query:  EWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKS-LWNI
        EWW  M+ P R    R   R+GFR  GL++L  DV +CEYED+H+MW +L +NE    +   +++Q+RK   WN+
Subjt:  EWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKS-LWNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGGTGGATCAAGATGAGCGCTCCGTTGAGAAGTTTTACCTTCAGAGTCGCCTGTCGTCTCGGATTTCGCAAACGCGGTTTAGTGAAATTGGGCCGAGATGTGAA
GGCCTGTGAATACGAGGACGTCCACGTGATGTGGGAGATGCTGAAGAGAAACGAAACGGATCAACTAATTGGATCGTCAGAAAGGCGCCAGAAAAGGAAATCGCTATGGA
ATATATTTTGGTGGGCTCGATCAGCTCCATGCCTCGGCAAAATCTGA
mRNA sequenceShow/hide mRNA sequence
AGTAATTAAAAACAAAAATATATTTTTACAAAGCTGCAGAGTGAGTGCCACGTAGTGGCACTGTCCTGAGTACACGAGGATCGTCCACAGTGTACAACAATGAGCGTGAC
CATCACGCGAGCGTTTTAGAGGGACCGTGATTACACGCGCCTCAAAGTCCTGAAGTTACGAAGTTTTGTAACGGAACGGAGAGTACGTGTGGTCCACGAAGCGAAGAAAG
AGGATATGCCAATGAGAAAGTCCCACGTGGCGAGAGAAGAGCAAAATCTGAATGAAAAGAGGCCGTCAGGATCAACGCAACGGTCGCGTTGGAATCGGGGAAAGGCGGAA
GTGTAGAGTGAGATTGGGCGGAAAGCGGTTAATATTTTCGAATTAGGTTCCACTGTTTGCTAACATTATTCTTTAGAGAAGGGAGAAGAGAGAGCGAGTTTCGCCAAGTG
AATTTTCTGTTTGTTCAGATTTGAGATCTTAGCGTCCCTTTCTCTTTTTGATCTCTTCTCTCACTGGAGTAGAAGCAGAGGAGAACCCCAAAATGGAATGGTGGATCAAG
ATGAGCGCTCCGTTGAGAAGTTTTACCTTCAGAGTCGCCTGTCGTCTCGGATTTCGCAAACGCGGTTTAGTGAAATTGGGCCGAGATGTGAAGGCCTGTGAATACGAGGA
CGTCCACGTGATGTGGGAGATGCTGAAGAGAAACGAAACGGATCAACTAATTGGATCGTCAGAAAGGCGCCAGAAAAGGAAATCGCTATGGAATATATTTTGGTGGGCTC
GATCAGCTCCATGCCTCGGCAAAATCTGAAGAATCCCAACACCATGAATTTGGGTTATATGGTAACCAAATCAAGAAAAGAAAAAAAAAACATCTATCCAAATATCACTT
TTGTTAGAAAAATAGTCCCCCACTACTACCACATAAGAGATAACAAAAATTATCTATTTTTGATCCAATCTTGACCATGGCCCCTCTCTTCTCTTCTCTCCTTTGCTTTT
TTTTATCTATATATCTATCAAAATAATAAAAACTAGATTTGTTCTTAT
Protein sequenceShow/hide protein sequence
MEWWIKMSAPLRSFTFRVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIFWWARSAPCLGKI