; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G24830 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G24830
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLIM domain-containing protein WLIM1
Genome locationChr4:22433119..22434664
RNA-Seq ExpressionCSPI04G24830
SyntenyCSPI04G24830
Gene Ontology termsGO:0051017 - actin filament bundle assembly (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR001781 - Zinc finger, LIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591426.1 LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. sororia]7.7e-10297.21Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKP DSE+PTATKVA
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMFVGTKDKCLGC  TVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

TYK20140.1 LIM domain-containing protein WLIM1 [Cucumis melo var. makuwa]8.2e-10498.88Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKI KPEKPGDSEKPTATKVA
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMF+GTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

XP_004141291.1 LIM domain-containing protein WLIM1 [Cucumis sativus]7.4e-105100Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

XP_008452649.1 PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo]9.7e-10599.44Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMF+GTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

XP_038900157.1 LIM domain-containing protein WLIM1 [Benincasa hispida]5.9e-10297.21Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKP DSEKP ATK+A
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMFVGTKDKCLGC  TVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

TrEMBL top hitse value%identityAlignment
A0A0A0L3T9 Uncharacterized protein3.6e-105100Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

A0A1S3BUC8 LIM domain-containing protein WLIM14.7e-10599.44Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMF+GTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

A0A5A7VG01 LIM domain-containing protein WLIM14.7e-10599.44Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMF+GTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

A0A5D3D9H2 LIM domain-containing protein WLIM14.0e-10498.88Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKI KPEKPGDSEKPTATKVA
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMF+GTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

A0A6J1FCP1 LIM domain-containing protein WLIM11.4e-10196.65Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKP DSE+PTATKVA
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
        SMFVGTKDKCLGC  TVYPTEKVSVNGT YHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

SwissProt top hitse value%identityAlignment
O04193 LIM domain-containing protein WLIM2a8.4e-5960Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        M+F GT QKC AC+KTVY V+ L+AD   YHKACF+C HC   L+LSNY+S EGV+YCRPHF+QLFK +GS  K+F+ +P     +KP      T +++A
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL
         MF GT+DKC  C KTVYP EKV+V    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL

O80839 LIM domain-containing protein PLIM2a4.3e-5554.29Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        M+F GT  KC ACDKTVY++D LT +   YHK+CFRC HC GTL +SNY+S +GVLYC+PHF+QLFK +G+  K+F+     GK EKP D    T +K++
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL
        S F GT+DKC  C KTVYP EKV++ G SYHK+CF+C H GC ++ S+Y +  G LYCK H  QL  EKG+ + +
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL

P29675 Pollen-specific protein SF32.3e-7773.14Show/hide
Query:  AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVAS
        +F GTTQKC  C+KTVYLVDKL A+ RVYHKACFRCHHCN TLKLSN+NSF+GV+YCR HFDQLFKRTGSL+KSF+GTPK  KPE+    E  +A +++S
Subjt:  AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVAS

Query:  MFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLE
         F GT+DKC  C K VYP E+V V+GT+YH++CFKCCHGGCTISPSNYIAHEGRLYCKHHH QL K+KGN SQLE
Subjt:  MFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLE

Q94JX5 LIM domain-containing protein WLIM11.8e-9387.01Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRPHFDQ FKRTGSL+KSFEGTPKIGKP++P + E+P  TKV+
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG
        +MF GT++KC+GC+KTVYP EKVSVNGT YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHH QLIKEKGNLSQLEG
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG

Q9M047 LIM domain-containing protein WLIM2b3.5e-5757.54Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TA
        M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+PHF+QLFK +GS +K+F+       P K  D   P    T 
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TA

Query:  TKVASMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL
        ++VA  F GT++KC  C+KTVYP EKV+V   +YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Subjt:  TKVASMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL

Arabidopsis top hitse value%identityAlignment
AT1G10200.1 GATA type zinc finger transcription factor family protein1.3e-9487.01Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRPHFDQ FKRTGSL+KSFEGTPKIGKP++P + E+P  TKV+
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG
        +MF GT++KC+GC+KTVYP EKVSVNGT YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHH QLIKEKGNLSQLEG
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG

AT2G39900.1 GATA type zinc finger transcription factor family protein5.9e-6060Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA
        M+F GT QKC AC+KTVY V+ L+AD   YHKACF+C HC   L+LSNY+S EGV+YCRPHF+QLFK +GS  K+F+ +P     +KP      T +++A
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVA

Query:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL
         MF GT+DKC  C KTVYP EKV+V    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Subjt:  SMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL

AT3G55770.1 GATA type zinc finger transcription factor family protein2.5e-5857.54Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TA
        M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+PHF+QLFK +GS +K+F+       P K  D   P    T 
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TA

Query:  TKVASMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL
        ++VA  F GT++KC  C+KTVYP EKV+V   +YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Subjt:  TKVASMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL

AT3G55770.2 GATA type zinc finger transcription factor family protein2.5e-5857.54Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TA
        M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+PHF+QLFK +GS +K+F+       P K  D   P    T 
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TA

Query:  TKVASMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL
        ++VA  F GT++KC  C+KTVYP EKV+V   +YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Subjt:  TKVASMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL

AT3G55770.3 GATA type zinc finger transcription factor family protein2.5e-5857.54Show/hide
Query:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TA
        M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+PHF+QLFK +GS +K+F+       P K  D   P    T 
Subjt:  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TA

Query:  TKVASMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL
        ++VA  F GT++KC  C+KTVYP EKV+V   +YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Subjt:  TKVASMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTGCAGGAACCACCCAGAAATGCATGGCCTGCGACAAAACTGTCTATTTAGTAGACAAACTTACTGCTGACAATCGTGTCTACCACAAAGCTTGCTTCCGCTG
TCACCACTGCAATGGAACCCTCAAGTTAAGTAATTACAATTCGTTTGAAGGAGTGCTTTACTGTCGGCCACACTTTGATCAGCTCTTTAAAAGAACTGGAAGCTTAGACA
AGAGCTTTGAAGGAACACCAAAGATTGGAAAACCGGAGAAACCGGGTGATTCTGAGAAACCAACAGCGACTAAGGTTGCAAGTATGTTCGTCGGTACTAAAGATAAGTGT
CTTGGATGTAACAAGACTGTTTATCCAACTGAGAAGGTTTCAGTAAATGGAACTTCGTACCATAAGAGCTGTTTCAAGTGCTGCCATGGCGGATGTACAATCAGCCCATC
GAATTACATTGCACATGAAGGACGACTTTACTGCAAACATCACCATACCCAACTCATCAAAGAGAAAGGAAACTTGAGCCAGCTGGAAGGAAGCCATTAA
mRNA sequenceShow/hide mRNA sequence
AGCAATTTAATTCAAAGAAATAAGGGGGGAAGTGGGGAAAAAAATCAAAGGGAGAGAGAGAGGGATGGTTGGTTGGGTTGGATGCTTGCAAATCCAGACAAATTGATTAC
CATTTATGCCCTTCAACTTTAGATTTGTCTACTTGAATCTCTCTTATACATACACCCATATCTTTTGCATCCATAGCCCAATTTCTATCTCTCTGCCCTCTTCCTTATCT
CCTTCACATTGTCTTCTTCTTCCTCCTAACACCGACTCAAATTTCAACACCAAGAAACTATAGGATTCTTTTGCAATTGCTATGGCTTTTGCAGGAACCACCCAGAAATG
CATGGCCTGCGACAAAACTGTCTATTTAGTAGACAAACTTACTGCTGACAATCGTGTCTACCACAAAGCTTGCTTCCGCTGTCACCACTGCAATGGAACCCTCAAGTTAA
GTAATTACAATTCGTTTGAAGGAGTGCTTTACTGTCGGCCACACTTTGATCAGCTCTTTAAAAGAACTGGAAGCTTAGACAAGAGCTTTGAAGGAACACCAAAGATTGGA
AAACCGGAGAAACCGGGTGATTCTGAGAAACCAACAGCGACTAAGGTTGCAAGTATGTTCGTCGGTACTAAAGATAAGTGTCTTGGATGTAACAAGACTGTTTATCCAAC
TGAGAAGGTTTCAGTAAATGGAACTTCGTACCATAAGAGCTGTTTCAAGTGCTGCCATGGCGGATGTACAATCAGCCCATCGAATTACATTGCACATGAAGGACGACTTT
ACTGCAAACATCACCATACCCAACTCATCAAAGAGAAAGGAAACTTGAGCCAGCTGGAAGGAAGCCATTAAAGAACCTTACACTCGTAGGCCTTGTTTTTCATTTTTTTC
TTTTTTCTTTTTTTTATGTCCTCTGCTTTCTTCCTTATTTTAGTCCTGCTTTTACGCTGTTCCCTTTTTGAACTTTAGCACCTCTCTCTTTGAAATTTGAATTGTAAAAC
AAAAGAAGTAATCGTGTGGGTCTCCCTCTGATTTTCGTTTTGGTTGGTGAATTCAAATAAAACTTGCAAGTAAAAGGCCAACGTATTAATTGATCATCCGTTATTTAATC
ACACATCAACATGCTCCAAAAGAGGCCGTTTGTTAATTTGTCCATCTCTGGACGTCACAAATTACAATACAACAGCTGTTGAAATTTCAAC
Protein sequenceShow/hide protein sequence
MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKC
LGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH