; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G24940 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G24940
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMixed-linked glucan synthase
Genome locationChr4:22511983..22512764
RNA-Seq ExpressionCSPI04G24940
SyntenyCSPI04G24940
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064464.1 hypothetical protein E6C27_scaffold255G001780 [Cucumis melo var. makuwa]8.9e-5098.08Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG
        MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQ+GTA GRRRAG
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

KAG6591437.1 hypothetical protein SDJN03_13783, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4489.42Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG
        MAAITSTCSSFFSIRS+SMEPRVRTSSP+H SP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND PLIPNDGNL+Q+GTA GRRR  
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

XP_022977101.1 uncharacterized protein LOC111477268 [Cucurbita maxima]2.5e-4489.42Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG
        MAAITSTCSSFFSIRS+SMEPRVRTSSPSH SP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND PLIPNDGNL+Q+G A GRRR  
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

XP_038897734.1 uncharacterized protein LOC120085674 isoform X1 [Benincasa hispida]2.4e-4793.27Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG
        MAAITSTCSSFFSIRSNSMEPR+RTSS SHGSP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND+PLIPNDGNLRQ+GTA GRRRAG
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

XP_038897735.1 uncharacterized protein LOC120085674 isoform X2 [Benincasa hispida]2.4e-4793.27Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG
        MAAITSTCSSFFSIRSNSMEPR+RTSS SHGSP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND+PLIPNDGNLRQ+GTA GRRRAG
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

TrEMBL top hitse value%identityAlignment
A0A0A0L2M3 Uncharacterized protein3.9e-51100Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG
        MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

A0A2P5CWX9 Uncharacterized protein3.4e-3173.33Show/hide
Query:  MAAITST-CSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRA
        MAA TST C+SFFS+RSN MEP+VRTSS SHGSP CGK+DGVA WLIN   TAFF SLERCSCIRIAT  DDGD+ ND+PLI NDGNLR +G    RRR 
Subjt:  MAAITST-CSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRA

Query:  GKGKK
        GKG K
Subjt:  GKGKK

A0A2R6R383 Protease2.0e-3169.52Show/hide
Query:  MAAIT-STCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRA
        MAA T S+CSSFF++R+N +EPRVR SSPSHGSP CGK DGV  WLING  +AFF SL+RCSCIRI+T EDDGD+ N++PLI NDGN R +  +GGRRR 
Subjt:  MAAIT-STCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRA

Query:  GKGKK
        GKGKK
Subjt:  GKGKK

A0A5D3D9D4 Uncharacterized protein4.3e-5098.08Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG
        MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQ+GTA GRRRAG
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

A0A6J1IIU9 uncharacterized protein LOC1114772681.2e-4489.42Show/hide
Query:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG
        MAAITSTCSSFFSIRS+SMEPRVRTSSPSH SP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND PLIPNDGNL+Q+G A GRRR  
Subjt:  MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein2.6e-0740.3Show/hide
Query:  SNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDD--GDEGNDIPL
        S+S+     T+S +  + S  KLD  A+W+    ++AFF SLERCSC+ ++T++DD  G+E ++ PL
Subjt:  SNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDD--GDEGNDIPL

AT4G24026.1 unknown protein1.3e-0635.59Show/hide
Query:  MEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGND
        M+  +  +S    + S  K+D  A+W+    ++AFF SLERC+C+ ++T+ DD D+ +D
Subjt:  MEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCATTACTTCCACTTGCAGTAGCTTCTTCTCCATCAGATCAAATTCTATGGAGCCAAGAGTTAGAACTTCTTCACCAAGCCATGGCTCTCCATCATGTGGGAA
GCTTGATGGGGTGGCAACTTGGCTCATCAATGGCTTTGTCACAGCTTTCTTTGGATCGTTGGAACGATGCTCTTGTATTCGTATTGCAACGGCTGAGGACGATGGCGATG
AGGGGAACGACATCCCCTTGATTCCGAACGACGGAAATCTTCGACAGGAGGGCACTGCAGGTGGGCGGAGGAGGGCTGGGAAAGGCAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
CTTTGTTTAGTGATTTAACTTCCACTGTCTTTTACAAAATTTATACTCACCTTGTCGGTAATTTTAACAGTATGAAAGGGCATGCTTCAAAAATTCAACCCTTAATTATT
AAAACAGGATCTATAGAAGATGCTTCTTTAGAACTTATAAACTGCTATAGGTTTAGAGCTTTCATAACTTTGTCTCTGTGTTTTCTCTCTCTGTTTCTGACTCACGGCTA
AGGAAAGAGCTTAAAATTTCCTTTTTCATGGCTGCCATTACTTCCACTTGCAGTAGCTTCTTCTCCATCAGATCAAATTCTATGGAGCCAAGAGTTAGAACTTCTTCACC
AAGCCATGGCTCTCCATCATGTGGGAAGCTTGATGGGGTGGCAACTTGGCTCATCAATGGCTTTGTCACAGCTTTCTTTGGATCGTTGGAACGATGCTCTTGTATTCGTA
TTGCAACGGCTGAGGACGATGGCGATGAGGGGAACGACATCCCCTTGATTCCGAACGACGGAAATCTTCGACAGGAGGGCACTGCAGGTGGGCGGAGGAGGGCTGGGAAA
GGCAAGAAGTAAATGCAATCTAATGAGTTGCTTGCTTCTCATGTTGTATAATCCAATTTCAAATCGAAAAAGCTCCTCTTTCTCTTTGGTAAGTGATATAAAGGAGCTTC
TGAATCTGAAATATTTACTACTTTTTCTTCTTCTTTTAATTTAGTTTTGTGGTGATGAAATCAACCAAATTACTTATAATATTTGTTCAGTGCTTTTAGAATCTATGAAT
CAAGAACTAAAA
Protein sequenceShow/hide protein sequence
MAAITSTCSSFFSIRSNSMEPRVRTSSPSHGSPSCGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEGNDIPLIPNDGNLRQEGTAGGRRRAGKGKK