; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G25000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G25000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationChr4:22553227..22554239
RNA-Seq ExpressionCSPI04G25000
SyntenyCSPI04G25000
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649895.1 hypothetical protein Csa_012205 [Cucumis sativus]9.2e-13598.32Show/hide
Query:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG
        MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG
Subjt:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG

Query:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYI
        VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGS NIASDGWW+GPNF SVGMLPPLCRNSLMHPSKGIYI
Subjt:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYI

Query:  GSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDRSS
        GSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDR+S
Subjt:  GSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDRSS

XP_004141412.1 RNA-binding protein 1 [Cucumis sativus]9.2e-13598.32Show/hide
Query:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG
        MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG
Subjt:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG

Query:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYI
        VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGS NIASDGWW+GPNF SVGMLPPLCRNSLMHPSKGIYI
Subjt:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYI

Query:  GSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDRSS
        GSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDR+S
Subjt:  GSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDRSS

XP_022982410.1 RNA-binding protein 1-like [Cucurbita maxima]2.0e-6558.68Show/hide
Query:  TRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHI
        TRM+   DQ RGRKIFVGGLSAELTE++F++YFE FG++TDVVVM DSVT RPRGFGF+TF+S++SVDSVLQ NFHELNGRRVEVKRAIPKKGNYNG HI
Subjt:  TRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHI

Query:  PNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYIGSR
             +KSPL     NV   YPYY  GY +YPGFT FP YG     YGS+ YGNWF P  G +AS   WYGPNF   GM PP  +NSL++P+      S 
Subjt:  PNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYIGSR

Query:  NGMANTRNG--------EIKQNTAGKRIMSADAAPFQIKDRS
        NG++    G        +++  T  ++ MSADA PF  KDR+
Subjt:  NGMANTRNG--------EIKQNTAGKRIMSADAAPFQIKDRS

XP_023524364.1 RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]6.5e-6457.85Show/hide
Query:  TRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHI
        TRM+   DQ RGRKIFVGGLSAELTE++F++YFE FG++TDVVVM DSVT RPRGFGF+TF+S++SVDSVLQ NFHELNGRRVEVKRAIPKKGNYNG HI
Subjt:  TRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHI

Query:  PNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYIGSR
             +KSPL     NV   YPYY  GY +YPGFT FP YG     YGS+ YGNWF P  G +AS   WY PNF   GM PP  +NSL++P+      S 
Subjt:  PNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYIGSR

Query:  NGMA------NTRNG--EIKQNTAGKRIMSADAAPFQIKDRS
        NG++       T +G  +++  +  ++ MSADA PF  KD++
Subjt:  NGMA------NTRNG--EIKQNTAGKRIMSADAAPFQIKDRS

XP_038898856.1 RNA-binding protein 1-like [Benincasa hispida]1.6e-10278.37Show/hide
Query:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG
        MSTTRM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FG+ITDVVVMHDSVTNRPRGFGF+TFES+ESVDSVLQ NFHELNGRRVEVKRAIPKKGNYNG
Subjt:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG

Query:  VHIPNAR--AAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGA-AVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHP---
         HIPNAR    KSPL N NRNVPFPYPYYGS YP+YPGFT FPHYG   VD YGS+ YGNWFPP  GN+AS+G WYGPNF  VG+ PP  RNSL+ P   
Subjt:  VHIPNAR--AAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGA-AVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHP---

Query:  SKGIY-IGSRNGMANT-RNGEIKQNTAGKRIMSADAAPFQIKDRS
        SKG+   G+ NGM +T RNGEIKQNT GKRIMSADA PFQIKDR+
Subjt:  SKGIY-IGSRNGMANT-RNGEIKQNTAGKRIMSADAAPFQIKDRS

TrEMBL top hitse value%identityAlignment
A0A0A0L563 RRM domain-containing protein4.4e-13598.32Show/hide
Query:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG
        MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG
Subjt:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG

Query:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYI
        VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGS NIASDGWW+GPNF SVGMLPPLCRNSLMHPSKGIYI
Subjt:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYI

Query:  GSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDRSS
        GSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDR+S
Subjt:  GSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDRSS

A0A2I4DTF8 heterogeneous nuclear ribonucleoprotein 1-like9.2e-4049.05Show/hide
Query:  DNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNA
        DN ++  R +KIFVGGLSA +TEEEF++YFE FG++TDVVVMHDS T+RPRGFGF+TF+S E+V +V+Q +FHELNGR VEVKRA+PK+ N    +  N 
Subjt:  DNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNA

Query:  RAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDS-YGSNFYGNWFPP-GSGNIAS-------DGWWYGPNFLSVGMLPPLCRNSLMHPSKG
        R      + G    P  YP Y  GY I PG+  FP + +   S YG+  YG W+P  GSG I S          WYGP   S+G + P     L H S  
Subjt:  RAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDS-YGSNFYGNWFPP-GSGNIAS-------DGWWYGPNFLSVGMLPPLCRNSLMHPSKG

Query:  IYIGSRNGMA
        IY G  +G A
Subjt:  IYIGSRNGMA

A0A6J1C724 RNA-binding protein 1-like1.9e-5351.44Show/hide
Query:  STTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGV
        S+ RM++NNDQ RG+KIFVGGL ++LTE EF+SYFE FGQITDVVVM DSVTNRPRGFGF+TF+S+ESV+ VLQ NFHELNGRRVEVKRA+PK  N N  
Subjt:  STTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGV

Query:  HIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPP---GSGNIAS----DGWWYGPNFLSVGMLPPLCRNSLMHP
           N +  KSPL   + +VP  YP++ SG  +YPG+  FPHY      YGS+ YG+W      G+G+ A        WY PN    GM P    NS++HP
Subjt:  HIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPP---GSGNIAS----DGWWYGPNFLSVGMLPPLCRNSLMHP

Query:  SKGIYIGSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDRS
           +Y      + +   G  ++N      MSADA PFQ+ +R+
Subjt:  SKGIYIGSRNGMANTRNGEIKQNTAGKRIMSADAAPFQIKDRS

A0A6J1FS87 RNA-binding protein 1-like4.1e-6458.3Show/hide
Query:  DQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAK
        DQ RGRKIFVGGLSAELTE++F++YFE FG++TDVVVM DSVT RPRGFGF+TF+S++SVDSVLQ NFHELNGRRVEVKRAIPKKGNYNG HI     +K
Subjt:  DQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAK

Query:  SPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYIGSRNGMANTR
        SPL     NV   YPYY  GY +YPGFT FP YG     YGS+ YGNWF P  G +AS   WY PNF   GM PP  +NSL++P+      S NG++   
Subjt:  SPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYIGSRNGMANTR

Query:  NG--------EIKQNTAGKRIMSADAAPFQIKDRS
         G        ++   T  ++ MSADA PF  KD++
Subjt:  NG--------EIKQNTAGKRIMSADAAPFQIKDRS

A0A6J1J2K5 RNA-binding protein 1-like9.7e-6658.68Show/hide
Query:  TRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHI
        TRM+   DQ RGRKIFVGGLSAELTE++F++YFE FG++TDVVVM DSVT RPRGFGF+TF+S++SVDSVLQ NFHELNGRRVEVKRAIPKKGNYNG HI
Subjt:  TRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHI

Query:  PNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYIGSR
             +KSPL     NV   YPYY  GY +YPGFT FP YG     YGS+ YGNWF P  G +AS   WYGPNF   GM PP  +NSL++P+      S 
Subjt:  PNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYIGSR

Query:  NGMANTRNG--------EIKQNTAGKRIMSADAAPFQIKDRS
        NG++    G        +++  T  ++ MSADA PF  KDR+
Subjt:  NGMANTRNG--------EIKQNTAGKRIMSADAAPFQIKDRS

SwissProt top hitse value%identityAlignment
Q8W034 Heterogeneous nuclear ribonucleoprotein 16.6e-2742.78Show/hide
Query:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG
        ++T+R    +   + +KIFVGGL   LT+EEFR YFE +G +TDV +M+D  TNRPRGFGFV+F+S ++VDSVL + FH+L+G++VEVKRA+PK  N  G
Subjt:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG

Query:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPG------FTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYG
                 +S    G+      Y  YG     Y G      F      G  + SYGS+ YG     G GN  S+G  YG
Subjt:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPG------FTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYG

Q920Q6 RNA-binding protein Musashi homolog 21.5e-1840.14Show/hide
Query:  RGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAKSPL
        R +KIFVGGLSA    E+ + YFE FG++ D ++M D  TNR RGFGFVTFE+ + V+ V + +FHE+N + VE K+A PK+     V  P     ++  
Subjt:  RGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAKSPL

Query:  LNGNRNVPFPYPYY--GSGYPIYPGF--THFPHYGAAVDSYGSNFYG
            R +P+    +  G G   YP F  T+   Y     SYG  F G
Subjt:  LNGNRNVPFPYPYY--GSGYPIYPGF--THFPHYGAAVDSYGSNFYG

Q96DH6 RNA-binding protein Musashi homolog 21.5e-1840.14Show/hide
Query:  RGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAKSPL
        R +KIFVGGLSA    E+ + YFE FG++ D ++M D  TNR RGFGFVTFE+ + V+ V + +FHE+N + VE K+A PK+     V  P     ++  
Subjt:  RGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAKSPL

Query:  LNGNRNVPFPYPYY--GSGYPIYPGF--THFPHYGAAVDSYGSNFYG
            R +P+    +  G G   YP F  T+   Y     SYG  F G
Subjt:  LNGNRNVPFPYPYY--GSGYPIYPGF--THFPHYGAAVDSYGSNFYG

Q9C652 RNA-binding protein 13.4e-3157.14Show/hide
Query:  MDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKG----NYNGV
        M +N    R +KIFVGGLS+  TEEEF+SYFE FG+ TDVVVMHD VTNRPRGFGFVT++S +SV+ V+Q NFHEL+ +RVEVKRAIPK+G    N N V
Subjt:  MDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKG----NYNGV

Query:  HIPNARAAKS-----PLLNGNRNV-PFPYPYYG
        +IP + ++       P  NG   V  FP P +G
Subjt:  HIPNARAAKS-----PLLNGNRNV-PFPYPYYG

Q9VVE5 RNA-binding protein Musashi homolog Rbp61.0e-1944.6Show/hide
Query:  RGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIP--------N
        R +KIFVGGLSA  T E+ +SYFE FG I D ++M D  TNR RGFGFVTF+S + VD V + +FHE+N + VE K+A PK+     V +P         
Subjt:  RGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIP--------N

Query:  ARAAKSPLLNGNRNVP--FPYPYY-----GSGYPIYPGF
         R+A   ++ G   +P  FP   Y     G GY  YP F
Subjt:  ARAAKSPLLNGNRNVP--FPYPYY-----GSGYPIYPGF

Arabidopsis top hitse value%identityAlignment
AT1G58470.1 RNA-binding protein 12.4e-3257.14Show/hide
Query:  MDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKG----NYNGV
        M +N    R +KIFVGGLS+  TEEEF+SYFE FG+ TDVVVMHD VTNRPRGFGFVT++S +SV+ V+Q NFHEL+ +RVEVKRAIPK+G    N N V
Subjt:  MDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKG----NYNGV

Query:  HIPNARAAKS-----PLLNGNRNV-PFPYPYYG
        +IP + ++       P  NG   V  FP P +G
Subjt:  HIPNARAAKS-----PLLNGNRNV-PFPYPYYG

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.7e-2842.78Show/hide
Query:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG
        ++T+R    +   + +KIFVGGL   LT+EEFR YFE +G +TDV +M+D  TNRPRGFGFV+F+S ++VDSVL + FH+L+G++VEVKRA+PK  N  G
Subjt:  MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNG

Query:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPG------FTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYG
                 +S    G+      Y  YG     Y G      F      G  + SYGS+ YG     G GN  S+G  YG
Subjt:  VHIPNARAAKSPLLNGNRNVPFPYPYYGSGYPIYPG------FTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYG

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-2844.59Show/hide
Query:  NNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARA
        N    R +KIFVGGL + +TE EF++YF+ FG I DVVVM+D  T RPRGFGF+TF+S ESVD VL + FHELNG+ VEVKRA+PK+       + +   
Subjt:  NNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARA

Query:  AKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGN
         +SPL+            YG+ Y + P            +   +N Y N FPPG  N
Subjt:  AKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGN

AT4G26650.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-2844.59Show/hide
Query:  NNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARA
        N    R +KIFVGGL + +TE EF++YF+ FG I DVVVM+D  T RPRGFGF+TF+S ESVD VL + FHELNG+ VEVKRA+PK+       + +   
Subjt:  NNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARA

Query:  AKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGN
         +SPL+            YG+ Y + P            +   +N Y N FPPG  N
Subjt:  AKSPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGN

AT5G55550.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-2744Show/hide
Query:  RGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAKSPL
        R +KIFVGGL + +TEEEF++YF+ FG I DVVVM+D  T RPRGFGF+TF+S ++VD VL + FHELNG+ VEVKRA+PK+       I      +SPL
Subjt:  RGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAKSPL

Query:  LNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGS-NFYGNWFPP--GSGNIASDGWWYGPNF-LSVGMLP
         +G          YG G    P  ++F ++      Y S    G  F P  GSG  A   +  G N  LS+ + P
Subjt:  LNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGS-NFYGNWFPP--GSGNIASDGWWYGPNF-LSVGMLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACTACTAGGATGGACAATAACAATGATCAGTGTAGGGGAAGAAAGATTTTTGTTGGTGGCTTATCGGCTGAACTAACTGAGGAGGAGTTCAGAAGTTACTTTGA
AAATTTTGGTCAGATAACTGATGTAGTTGTGATGCATGATAGTGTAACCAATCGCCCTAGAGGATTTGGATTTGTCACATTTGAATCTTTAGAATCTGTTGACTCAGTTC
TGCAAAGGAACTTTCATGAACTGAATGGGAGGCGTGTGGAGGTGAAGAGAGCTATCCCAAAAAAGGGCAACTACAATGGTGTTCATATTCCCAATGCTAGAGCAGCAAAA
AGTCCACTTCTTAATGGTAATAGGAATGTTCCTTTCCCTTACCCTTATTATGGTTCGGGTTATCCAATTTATCCCGGTTTTACACATTTTCCACATTATGGAGCAGCAGT
TGATTCGTATGGTTCTAACTTCTATGGGAATTGGTTTCCCCCTGGTTCTGGTAACATAGCTTCAGATGGATGGTGGTATGGACCTAATTTTCTTAGTGTTGGGATGTTAC
CTCCACTTTGTAGAAATTCTTTAATGCATCCAAGCAAGGGGATCTATATAGGGAGCAGAAATGGAATGGCTAATACCAGAAACGGGGAGATAAAGCAGAACACGGCCGGA
AAACGAATTATGTCGGCTGATGCAGCTCCATTTCAGATCAAAGACAGATCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
AATTGGAAGTTGAAAAGAAAAAAAAAAACCATACGTGATAAAATCTTTGGAGCCAACAAGGTTGAATATGAGTACTACTAGGATGGACAATAACAATGATCAGTGTAGGG
GAAGAAAGATTTTTGTTGGTGGCTTATCGGCTGAACTAACTGAGGAGGAGTTCAGAAGTTACTTTGAAAATTTTGGTCAGATAACTGATGTAGTTGTGATGCATGATAGT
GTAACCAATCGCCCTAGAGGATTTGGATTTGTCACATTTGAATCTTTAGAATCTGTTGACTCAGTTCTGCAAAGGAACTTTCATGAACTGAATGGGAGGCGTGTGGAGGT
GAAGAGAGCTATCCCAAAAAAGGGCAACTACAATGGTGTTCATATTCCCAATGCTAGAGCAGCAAAAAGTCCACTTCTTAATGGTAATAGGAATGTTCCTTTCCCTTACC
CTTATTATGGTTCGGGTTATCCAATTTATCCCGGTTTTACACATTTTCCACATTATGGAGCAGCAGTTGATTCGTATGGTTCTAACTTCTATGGGAATTGGTTTCCCCCT
GGTTCTGGTAACATAGCTTCAGATGGATGGTGGTATGGACCTAATTTTCTTAGTGTTGGGATGTTACCTCCACTTTGTAGAAATTCTTTAATGCATCCAAGCAAGGGGAT
CTATATAGGGAGCAGAAATGGAATGGCTAATACCAGAAACGGGGAGATAAAGCAGAACACGGCCGGAAAACGAATTATGTCGGCTGATGCAGCTCCATTTCAGATCAAAG
ACAGATCTTCTTGAAGATATTTTAACTTAAATATTTGTTATTGGATTTGCATCTTACGTAATGGCATTTGATTTGTAAATTCTGTTGGGATAGATCTATGTCTCTCATTC
TTAGAATTTTTGGGATATAATTGTTCTGTGAATAAATCTCTCCTTTGGGGTATGACAATGCTTGTGAATAATTTTTGTGGACCAAGACAATGATTATGATTAATTGCTTA
TGGTGCACTGAAATATTGAAGGG
Protein sequenceShow/hide protein sequence
MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAK
SPLLNGNRNVPFPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNWFPPGSGNIASDGWWYGPNFLSVGMLPPLCRNSLMHPSKGIYIGSRNGMANTRNGEIKQNTAG
KRIMSADAAPFQIKDRSS