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CSPI04G25080 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G25080
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEmbryo defective 1273, putative
Genome locationChr4:22610136..22612300
RNA-Seq ExpressionCSPI04G25080
SyntenyCSPI04G25080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064476.1 putative Embryo defective 1273 [Cucumis melo var. makuwa]8.2e-10994.14Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPKEQSLFVGQ
        WLWRNLP+ERNQP EQS FVGQ
Subjt:  WLWRNLPRERNQPKEQSLFVGQ

XP_004141304.1 uncharacterized protein LOC101205191 [Cucumis sativus]9.6e-11899.56Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPKEQSLFVGQATS
        WLWRNLPRERNQP EQSLFVGQATS
Subjt:  WLWRNLPRERNQPKEQSLFVGQATS

XP_008452688.1 PREDICTED: uncharacterized protein LOC103493634 [Cucumis melo]5.6e-11093.78Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPKEQSLFVGQATS
        WLWRNLP+ERNQP EQS FVGQ TS
Subjt:  WLWRNLPRERNQPKEQSLFVGQATS

XP_022159733.1 uncharacterized protein LOC111026039 [Momordica charantia]2.8e-8575.66Show/hide
Query:  MALPASISLPSLSSTSRIILFK-GKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKE
        MALPASI L SLS  S IIL K     LNSCF LH  R+A+L SS K +M++FMDSN +P++IENLKEKMQEVVPEPVK+FPWKEAEK+++ERL FMGKE
Subjt:  MALPASISLPSLSSTSRIILFK-GKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKE

Query:  TLKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQV
          KWSLL+FFV SS SD VASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+  GS F+LVKLI YGFA QA  FPLHVANGGLMQV
Subjt:  TLKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQV

Query:  LWLWRNLPRERNQPKEQSLFVGQATS
        LWLWRN  RERN+P EQS FV Q TS
Subjt:  LWLWRNLPRERNQPKEQSLFVGQATS

XP_038900238.1 uncharacterized protein LOC120087328 [Benincasa hispida]9.4e-9784.58Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLS TSRIILFK K + NSC  L+G R+ATL +S+KVKMARFMDSN +PIEIE+LKEKMQEVVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFG--NSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQ
        LKWSLLLFFVLSS SD VASIVRN+ELLIPIGLFIGVLLTDLLKEISQEVFG  NSEES FKKQLYG GSFF+LVKLI YGF IQA  FPLHVANGGLMQ
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFG--NSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQ

Query:  VLWLWRNLPRERNQPKEQSLFVGQATS
        VLWLWRNL RERN+P EQS FVGQ TS
Subjt:  VLWLWRNLPRERNQPKEQSLFVGQATS

TrEMBL top hitse value%identityAlignment
A0A0A0L2N8 Uncharacterized protein4.7e-11899.56Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPKEQSLFVGQATS
        WLWRNLPRERNQP EQSLFVGQATS
Subjt:  WLWRNLPRERNQPKEQSLFVGQATS

A0A1S3BVL5 uncharacterized protein LOC1034936342.7e-11093.78Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPKEQSLFVGQATS
        WLWRNLP+ERNQP EQS FVGQ TS
Subjt:  WLWRNLPRERNQPKEQSLFVGQATS

A0A5A7VDP4 Putative Embryo defective 12733.9e-10994.14Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPKEQSLFVGQ
        WLWRNLP+ERNQP EQS FVGQ
Subjt:  WLWRNLPRERNQPKEQSLFVGQ

A0A5D3D973 Putative Embryo defective 12732.7e-11093.78Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPKEQSLFVGQATS
        WLWRNLP+ERNQP EQS FVGQ TS
Subjt:  WLWRNLPRERNQPKEQSLFVGQATS

A0A6J1DZN6 uncharacterized protein LOC1110260391.4e-8575.66Show/hide
Query:  MALPASISLPSLSSTSRIILFK-GKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKE
        MALPASI L SLS  S IIL K     LNSCF LH  R+A+L SS K +M++FMDSN +P++IENLKEKMQEVVPEPVK+FPWKEAEK+++ERL FMGKE
Subjt:  MALPASISLPSLSSTSRIILFK-GKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKE

Query:  TLKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQV
          KWSLL+FFV SS SD VASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+  GS F+LVKLI YGFA QA  FPLHVANGGLMQV
Subjt:  TLKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQV

Query:  LWLWRNLPRERNQPKEQSLFVGQATS
        LWLWRN  RERN+P EQS FV Q TS
Subjt:  LWLWRNLPRERNQPKEQSLFVGQATS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGCCGGCGTCAATATCACTGCCCTCCTTATCATCCACTTCCAGGATTATACTATTCAAGGGGAAAACAACTCTTAATAGCTGCTTCCCGTTGCATGGTGGTCG
CCGAGCTACTCTTACATCTTCAGTGAAAGTAAAAATGGCACGGTTTATGGATTCTAATTTTGTGCCTATAGAGATTGAAAATTTAAAAGAGAAGATGCAGGAGGTTGTAC
CTGAACCCGTTAAAATTTTTCCTTGGAAAGAAGCAGAGAAGATAGTGGTGGAGAGACTGGCTTTTATGGGGAAGGAGACACTGAAGTGGTCTCTTCTCTTGTTCTTTGTC
CTTAGCTCATGTTCAGATATTGTAGCATCCATAGTTAGAAACCAGGAGTTACTGATCCCTATTGGTCTTTTTATTGGTGTCTTGTTGACTGACCTTTTAAAAGAGATATC
TCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAACAACTTTATGGTTTTGGTTCCTTCTTCATTCTTGTGAAGCTAATTGTTTATGGCTTTGCAATTCAAG
CACCGGTGTTTCCTCTACATGTTGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAGAAATTTACCAAGAGAAAGAAATCAACCGAAAGAACAGAGCCTGTTCGTA
GGCCAAGCTACATCTTAA
mRNA sequenceShow/hide mRNA sequence
GTTGGATCGGAACAAGTTTTTGTCTTTAATTTTTTTACCAAATCTAAACAGTTGTTTTAAACAGGATGGTCGGGTTAATAAAAATAGAAGTTTAAGAGTAAAAATAAAAC
TTAAAAAAAAAAAAAAGAGGAAAAAACCGAGGCTTCTGGGTTTGGAACCCCGAAACGGAGAACCCACCCAAGTTGAACCCTACATAGATAGATAGAGAGAGAGAAATAGA
GGGAGAGATTAATGAAAGGAAGGCGAAGACGATAAGGGCTAACGGCGAATTCCGGGACATCAAATGGCGCTGCCGGCGTCAATATCACTGCCCTCCTTATCATCCACTTC
CAGGATTATACTATTCAAGGGGAAAACAACTCTTAATAGCTGCTTCCCGTTGCATGGTGGTCGCCGAGCTACTCTTACATCTTCAGTGAAAGTAAAAATGGCACGGTTTA
TGGATTCTAATTTTGTGCCTATAGAGATTGAAAATTTAAAAGAGAAGATGCAGGAGGTTGTACCTGAACCCGTTAAAATTTTTCCTTGGAAAGAAGCAGAGAAGATAGTG
GTGGAGAGACTGGCTTTTATGGGGAAGGAGACACTGAAGTGGTCTCTTCTCTTGTTCTTTGTCCTTAGCTCATGTTCAGATATTGTAGCATCCATAGTTAGAAACCAGGA
GTTACTGATCCCTATTGGTCTTTTTATTGGTGTCTTGTTGACTGACCTTTTAAAAGAGATATCTCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAACAAC
TTTATGGTTTTGGTTCCTTCTTCATTCTTGTGAAGCTAATTGTTTATGGCTTTGCAATTCAAGCACCGGTGTTTCCTCTACATGTTGCAAATGGTGGGTTAATGCAAGTT
TTGTGGCTGTGGAGAAATTTACCAAGAGAAAGAAATCAACCGAAAGAACAGAGCCTGTTCGTAGGCCAAGCTACATCTTAAACATGGATGAATAAGATTGTTTCAGATGT
TAATATTTGCTTCCTTGAAGAATTTGGTCGTCATGTAAGGATGGGAGACAACAATATTATGATATGTACTGGAAACTTGTTTAACATTGGAGACACAGTGGCGAGCCCTG
GCTATGTATGAGTAGGTTTTCTTTTCCTTTTGAGATCAACAACGCATGAAGCAGTAGAGAGATTTGAACTTTTGACGTCTTGGTTGAAGGCATTTTCATAGACCGGTTGA
GTTATGCTCGAGTTTGCTTAGACCGGTTGAGTTATGGTTGAGTTATGCTCGAGTTTGCTTGTATGAGTAGGTTGTATCAAAACTCTTGCTCTGAGAGGTAATGCTAGCTA
GGTATTGTGTATCGGCTGCATAATTAATTTGGTAATGAGCTATGTTTTGGCACCATCTTCCTTTTGCCCTGCCTCGTTTTTGTCAACTTTGGTTCTATTTTGTGGTTGTT
TCGTTCTTTTGCAGAGTTGGATTTGAGTTTTATTAGTTATGCTTTTGTGATATAAAGCATGGAGATAAGAAATTATTTGTGGCAAATTTGCTCTAAAGAATTAAAACATT
TTTCTTGGAGGT
Protein sequenceShow/hide protein sequence
MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKETLKWSLLLFFV
LSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVLWLWRNLPRERNQPKEQSLFV
GQATS