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CSPI04G25180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G25180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCRG16
Genome locationChr4:22699183..22699569
RNA-Seq ExpressionCSPI04G25180
SyntenyCSPI04G25180
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1686.15Show/hide
Query:  MAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA
        MAAVSK SFMALVAVLF V++VAVAQSAESPAP PASPA SVVPSLS ACVGAF+AL+FGSALKA
Subjt:  MAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0556.25Show/hide
Query:  MAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALK
        MA VS+ S +AL+A++FAV +VA   + E+PAP PASPA S+ PS   ACV AF+AL FGS L+
Subjt:  MAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALK

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1578.67Show/hide
Query:  FLLSFFWKLPMAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA
        FLL+      MAAVSK SFMALVAVLF V++VAVAQSAESPAP PASPA SVVPSLS ACVGAF+AL+FGSALKA
Subjt:  FLLSFFWKLPMAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]1.4e-2098.46Show/hide
Query:  MAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA
        MAAVSKVSFMALVAVLFAVL+VAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA
Subjt:  MAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]1.9e-0648.45Show/hide
Query:  SFFSLTILSFFLS-------KPYFLLSFFWKLPMAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALK
        SF + T+LS  LS       +P++L       PMAA+SKVS +AL+A++FA+ +VA   + E+PAP PASPA S+ PS   AC+ AFLAL FGS L+
Subjt:  SFFSLTILSFFLS-------KPYFLLSFFWKLPMAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALK

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein9.4e-0748.45Show/hide
Query:  SFFSLTILSFFLS-------KPYFLLSFFWKLPMAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALK
        SF + T+LS  LS       +P++L       PMAA+SKVS +AL+A++FA+ +VA   + E+PAP PASPA S+ PS   AC+ AFLAL FGS L+
Subjt:  SFFSLTILSFFLS-------KPYFLLSFFWKLPMAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALK

Q96504 CRG166.7e-2198.46Show/hide
Query:  MAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA
        MAAVSKVSFMALVAVLFAVL+VAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA
Subjt:  MAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLSFACVGAFLALLFGSALKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCTTTGTAATTCCGCCATCTCCTCCACTCCTTTCTTTCTCTCCTCTCTCTCTCTATTATATAAACACTCCCACCTTTCTCTTTCTCCGCTGCCAAACCTTCCA
TTCCTTTTTCTCACTTACTATTCTTTCTTTCTTTCTTTCAAAACCCTACTTTCTTCTCTCTTTTTTTTGGAAGCTACCAATGGCCGCCGTCTCTAAGGTTTCTTTCATGG
CTCTTGTTGCCGTTTTGTTCGCCGTCCTCGCCGTTGCTGTTGCACAATCTGCAGAGTCTCCTGCTCCCCCTCCGGCTTCTCCGGCTAACTCTGTCGTTCCTTCCTTGAGC
TTTGCTTGTGTTGGTGCTTTCCTTGCTCTTCTCTTTGGATCTGCACTCAAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCTTTGTAATTCCGCCATCTCCTCCACTCCTTTCTTTCTCTCCTCTCTCTCTCTATTATATAAACACTCCCACCTTTCTCTTTCTCCGCTGCCAAACCTTCCA
TTCCTTTTTCTCACTTACTATTCTTTCTTTCTTTCTTTCAAAACCCTACTTTCTTCTCTCTTTTTTTTGGAAGCTACCAATGGCCGCCGTCTCTAAGGTTTCTTTCATGG
CTCTTGTTGCCGTTTTGTTCGCCGTCCTCGCCGTTGCTGTTGCACAATCTGCAGAGTCTCCTGCTCCCCCTCCGGCTTCTCCGGCTAACTCTGTCGTTCCTTCCTTGAGC
TTTGCTTGTGTTGGTGCTTTCCTTGCTCTTCTCTTTGGATCTGCACTCAAGGCTTGA
Protein sequenceShow/hide protein sequence
MASFVIPPSPPLLSFSPLSLYYINTPTFLFLRCQTFHSFFSLTILSFFLSKPYFLLSFFWKLPMAAVSKVSFMALVAVLFAVLAVAVAQSAESPAPPPASPANSVVPSLS
FACVGAFLALLFGSALKA