; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G25620 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G25620
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRWP-RK domain-containing protein
Genome locationChr4:22942533..22943757
RNA-Seq ExpressionCSPI04G25620
SyntenyCSPI04G25620
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR003035 - RWP-RK domain
IPR044607 - Transcription factor RKD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064525.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa]8.5e-6475.96Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE
        MVEEYSALPEPLSDFYDILCIGLDWNDD+AP +SH QPLSSYP    +S          +  + QS                   QRQRAGRMTVNDLKE
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE

Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD
        YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDA TRARAEAEMERLRQELAQFCAGIVPD
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD

KAG6608345.1 Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6677.3Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDE---APHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVND
        M +EY+A+PEPLSDFYD+LCIGLDWND+    +PH ++ QPL   P   E  + EEERE+ Q++M++Q    PE  G RRVPQT LARQRQRAGRMTVND
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDE---APHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVND

Query:  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVP
        LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALG RLRSRDA TRARAEAEM+RLRQELAQFCAGIVP
Subjt:  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVP

KAG7037698.1 Protein RKD3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6576.63Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDE---APHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVND
        M +EY+A+PEPLSDFYD+LCIGLDWND+    +PH ++ QPL   P   E  + EEERE+ Q++M++Q    PE  G RRVPQT LARQRQRAGRMTVND
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDE---APHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVND

Query:  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIV
        LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALG RLRSRDA TRARAEAEM+RLRQELAQFCAGI+
Subjt:  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIV

KGN55364.1 hypothetical protein Csa_012951 [Cucumis sativus]3.4e-97100Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE
        MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE

Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD
        YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD

TYK20065.1 protein RKD2-like isoform X1 [Cucumis melo var. makuwa]1.2e-8994.54Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE
        MVEEYSALPEPLSDFYDILCIGLDWNDD+AP +SH QPLSSYPEGGEES+GEEEREE QIQME+QSHPPPE GG RRVPQTPLARQRQRAGRMTVNDLKE
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE

Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD
        YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDA TRARAEAEMERLRQELAQFCAGIVPD
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD

TrEMBL top hitse value%identityAlignment
A0A0A0L2U8 RWP-RK domain-containing protein1.7e-97100Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE
        MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE

Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD
        YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD

A0A5A7VF79 Protein RKD2-like isoform X14.1e-6475.96Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE
        MVEEYSALPEPLSDFYDILCIGLDWNDD+AP +SH QPLSSYP    +S          +  + QS                   QRQRAGRMTVNDLKE
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE

Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD
        YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDA TRARAEAEMERLRQELAQFCAGIVPD
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD

A0A5D3D916 Protein RKD2-like isoform X15.7e-9094.54Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE
        MVEEYSALPEPLSDFYDILCIGLDWNDD+AP +SH QPLSSYPEGGEES+GEEEREE QIQME+QSHPPPE GG RRVPQTPLARQRQRAGRMTVNDLKE
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKE

Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD
        YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDA TRARAEAEMERLRQELAQFCAGIVPD
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD

A0A6J1BQU6 protein RKD3-like8.6e-3850Show/hide
Query:  MVEEYSALPEPLSDFYDILCIGLDWNDD-EAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGS--RRVPQTP-LARQRQRAGRMTVN
        ++E+Y+ +P+P+S+FYD LC+G+DW ++        L P           N E+E  +Q         PPPE       R P+ P LA QR R GRMTVN
Subjt:  MVEEYSALPEPLSDFYDILCIGLDWNDD-EAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGS--RRVPQTP-LARQRQRAGRMTVN

Query:  DLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGI
        D+ +YLHLPISEA+KK+N+C TV+KKICRRSGL RWPYRK++SY+R++ AL   + S    TRARAEAE+ER+++ELA FCAGI
Subjt:  DLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGI

A0A6J1CQA6 protein RKD1-like2.2e-4988.43Show/hide
Query:  MEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRAR
        + +Q  P PE  G RR+PQT LARQRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDA TR R
Subjt:  MEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRAR

Query:  AEAEMERLRQELAQFCAGIVP
        AEAEMERLRQELAQFCAGIVP
Subjt:  AEAEMERLRQELAQFCAGIVP

SwissProt top hitse value%identityAlignment
O81791 Protein RKD52.1e-0427.18Show/hide
Query:  QPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRK
        Q L+  P+   ES      + +  + E       E      + +       +    +++ +L +Y  L I EA++ + + LTV+KK CR  G+ RWP+RK
Subjt:  QPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRK

Query:  VKS
        +KS
Subjt:  VKS

Q9FGD1 Protein RKD32.1e-0425.81Show/hide
Query:  WNDDEAPHISHLQP----LSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVV
        WN++   + + ++P    +S     G+ +  +   E+     EK S         +R+      R+      M+   +K+Y ++PI++AAK++N+ +T++
Subjt:  WNDDEAPHISHLQP----LSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVV

Query:  KKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQ
        KK CR  G+ RWP+RK+ S    + AL   L+     T+ R      R   EL +
Subjt:  KKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQ

Q9LVU8 Protein RKD44.5e-0742.59Show/hide
Query:  QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS
        +++R  ++ ++++K++   PI +AAK++N+ LTV+KK CR  G+ RWP+RK+KS
Subjt:  QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS

Q9M1B0 Protein NLP96.4e-0631.33Show/hide
Query:  EVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS
        E+ G+RR+ +   + ++     +++N L++Y    + +AAK + +C T +K+ICR+ G+ RWP RK+    R +  + T L S
Subjt:  EVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS

Q9M9U9 Protein RKD13.2e-0531.94Show/hide
Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQE
        Y ++PI++AA+++N+ LT++KK CR  G++RWP+RK+ S Q+ +  +    +        +    +E+L +E
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQE

Arabidopsis top hitse value%identityAlignment
AT1G18790.1 RWP-RK domain-containing protein2.3e-0631.94Show/hide
Query:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQE
        Y ++PI++AA+++N+ LT++KK CR  G++RWP+RK+ S Q+ +  +    +        +    +E+L +E
Subjt:  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQE

AT3G59580.1 Plant regulator RWP-RK family protein4.6e-0731.33Show/hide
Query:  EVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS
        E+ G+RR+ +   + ++     +++N L++Y    + +AAK + +C T +K+ICR+ G+ RWP RK+    R +  + T L S
Subjt:  EVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS

AT3G59580.2 Plant regulator RWP-RK family protein4.6e-0731.33Show/hide
Query:  EVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS
        E+ G+RR+ +   + ++     +++N L++Y    + +AAK + +C T +K+ICR+ G+ RWP RK+    R +  + T L S
Subjt:  EVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRS

AT4G35590.1 RWP-RK domain-containing protein1.5e-0527.18Show/hide
Query:  QPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRK
        Q L+  P+   ES      + +  + E       E      + +       +    +++ +L +Y  L I EA++ + + LTV+KK CR  G+ RWP+RK
Subjt:  QPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRK

Query:  VKS
        +KS
Subjt:  VKS

AT5G53040.1 RWP-RK domain-containing protein3.2e-0842.59Show/hide
Query:  QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS
        +++R  ++ ++++K++   PI +AAK++N+ LTV+KK CR  G+ RWP+RK+KS
Subjt:  QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGGAGTACTCAGCTCTTCCAGAGCCATTATCTGATTTTTATGATATTTTGTGCATCGGATTGGATTGGAATGACGATGAAGCCCCTCACATATCCCACCTTCA
ACCACTCTCGTCTTATCCAGAGGGTGGAGAGGAATCCAATGGAGAAGAAGAGAGAGAAGAACAACAAATCCAAATGGAGAAACAATCACATCCACCGCCGGAAGTCGGGG
GTAGTCGGCGAGTTCCCCAAACACCTCTAGCAAGACAGAGACAGAGAGCTGGAAGAATGACGGTGAACGATTTGAAAGAATATCTTCACCTTCCAATCAGCGAGGCTGCG
AAGAAGATGAACCTTTGTCTCACAGTCGTCAAGAAAATTTGCCGCCGGAGTGGACTCCGCCGCTGGCCTTACAGAAAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTT
AGGGACGAGACTGAGATCGAGAGATGCAGGGACGAGGGCCAGAGCTGAGGCTGAAATGGAAAGGCTACGCCAAGAATTGGCACAGTTTTGTGCTGGAATTGTACCTGATT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGGAGTACTCAGCTCTTCCAGAGCCATTATCTGATTTTTATGATATTTTGTGCATCGGATTGGATTGGAATGACGATGAAGCCCCTCACATATCCCACCTTCA
ACCACTCTCGTCTTATCCAGAGGGTGGAGAGGAATCCAATGGAGAAGAAGAGAGAGAAGAACAACAAATCCAAATGGAGAAACAATCACATCCACCGCCGGAAGTCGGGG
GTAGTCGGCGAGTTCCCCAAACACCTCTAGCAAGACAGAGACAGAGAGCTGGAAGAATGACGGTGAACGATTTGAAAGAATATCTTCACCTTCCAATCAGCGAGGCTGCG
AAGAAGATGAACCTTTGTCTCACAGTCGTCAAGAAAATTTGCCGCCGGAGTGGACTCCGCCGCTGGCCTTACAGAAAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTT
AGGGACGAGACTGAGATCGAGAGATGCAGGGACGAGGGCCAGAGCTGAGGCTGAAATGGAAAGGCTACGCCAAGAATTGGCACAGTTTTGTGCTGGAATTGTACCTGATT
AA
Protein sequenceShow/hide protein sequence
MVEEYSALPEPLSDFYDILCIGLDWNDDEAPHISHLQPLSSYPEGGEESNGEEEREEQQIQMEKQSHPPPEVGGSRRVPQTPLARQRQRAGRMTVNDLKEYLHLPISEAA
KKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD