CuGenDBv2

Gene ID	CSPI04G26310
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	symplekin-like isoform X1
Genome location	Chr4:23461960..23462385
RNA-Seq Expression	CSPI04G26310
Synteny	CSPI04G26310
Gene Ontology terms	GO:0071333 - cellular response to glucose stimulus (biological process)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008466106.1 PREDICTED: uncharacterized protein LOC103503628 isoform X2 [Cucumis melo]

5.7e-35

98.75

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Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
        GHELALHVLYHLHSLNILDS ESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN

XP_008466107.1 PREDICTED: uncharacterized protein LOC103503628 isoform X3 [Cucumis melo]

5.7e-35

98.75

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Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
        GHELALHVLYHLHSLNILDS ESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN

XP_008466108.1 PREDICTED: uncharacterized protein LOC103503628 isoform X4 [Cucumis melo]

5.7e-35

98.75

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Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
        GHELALHVLYHLHSLNILDS ESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN

XP_011652605.1 uncharacterized protein LOC101202828 isoform X1 [Cucumis sativus]

3.0e-36

97.59

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Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNRSE
        GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNR +
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNRSE

XP_011652606.1 uncharacterized protein LOC101202828 isoform X2 [Cucumis sativus]

3.0e-36

97.59

Show/hide

Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNRSE
        GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNR +
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNRSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGZ1 Symplekin_C domain-containing protein

1.5e-36

97.59

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Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNRSE
        GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNR +
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNRSE

A0A1S3CQF9 uncharacterized protein LOC103503628 isoform X2

2.8e-35

98.75

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Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
        GHELALHVLYHLHSLNILDS ESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN

A0A1S3CQG3 uncharacterized protein LOC103503628 isoform X3

2.8e-35

98.75

Show/hide

Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
        GHELALHVLYHLHSLNILDS ESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN

A0A1S3CQH3 uncharacterized protein LOC103503628 isoform X1

2.8e-35

98.75

Show/hide

Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
        GHELALHVLYHLHSLNILDS ESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN

A0A1S3CQS1 uncharacterized protein LOC103503628 isoform X4

2.8e-35

98.75

Show/hide

Query:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
        GHELALHVLYHLHSLNILDS ESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN
Subjt:  GHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G27595.1 CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075)

5.9e-22

69.33

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Query:  GHELALHVLYHLHSLNILDSVESSSFA-VYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCS
        GH+L LHVLYHLHS+ ILD+ ESS +A VYE FL+ VA+S LDA PASDKSFSRL GE P LPDS + LL +LCS
Subjt:  GHELALHVLYHLHSLNILDSVESSSFA-VYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCS

AT5G01400.1 HEAT repeat-containing protein

1.4e-10

46.05

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Query:  GHELALHVLYHLHSLNILDS---VESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLC
        GHEL + VLY L+     +      +++ + YE FLL VA++L D+FP SDKS S+LLG+ P LP S L LL   C
Subjt:  GHELALHVLYHLHSLNILDS---VESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLC

Sequences

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CDS sequence

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ATGGCGGGGCATGAGCTTGCGTTGCATGTCTTATATCATCTGCATTCACTTAATATTCTGGATTCAGTGGAAAGTTCTTCTTTTGCTGTGTACGAGAAGTTTCTTCTAGT
TGTGGCTAAATCGTTGCTAGATGCTTTTCCAGCTTCGGACAAATCTTTTAGTAGACTTCTTGGTGAAGTTCCAGTTTTGCCGGACTCTACCTTGGAACTATTACATAAAC
TTTGCTCTTGTGATATTACTGACAACCGAAGTGAAGGAAAGTTATTCTACAGTTATTATGATCATGTATAA

mRNA sequence

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Protein sequence

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MAGHELALHVLYHLHSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVLPDSTLELLHKLCSCDITDNRSEGKLFYSYYDHV

CSPI04G26310 (gene) of Cucumber (PI 183967) v1 genome