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CSPI04G26810 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G26810
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMediator of RNA polymerase II transcription subunit 26
Genome locationChr4:23773823..23774385
RNA-Seq ExpressionCSPI04G26810
SyntenyCSPI04G26810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649958.1 hypothetical protein Csa_012377 [Cucumis sativus]2.4e-31100Show/hide
Query:  PLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSYFQ
        PLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSYFQ
Subjt:  PLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSYFQ
KAG6591229.1 hypothetical protein SDJN03_13575, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3278.43Show/hide
Query:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
        ME  QK+EMEREQQRREE+KK+EQEPP+YIS MQPLTE AYGGGMYGT++ G Q SLQ  K PAS TQSADGPV + MK KH PPPSSGDRDIDITGQSY
Subjt:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
XP_008452943.1 PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo]4.3e-4189.22Show/hide
Query:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
        MENKQ+IEMEREQQRRE+SKKIEQEPPYYIS MQPLTE AYGGGMYGT++ GDQ+SLQ+KKVPAS TQSADGPV AEMKLKHPPPPSSGDRDIDITGQSY
Subjt:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
XP_011654420.1 uncharacterized protein LOC105435391 [Cucumis sativus]7.4e-49100Show/hide
Query:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
        MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
Subjt:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
XP_022936823.1 uncharacterized protein LOC111443294 [Cucurbita moschata]6.3e-3277.45Show/hide
Query:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
        ME  QK+EMEREQQRREE+KK+EQEPP+YIS MQPLTE AYGGGMYG ++ G Q SLQ  K PAS TQSADGPV + MK KH PPPSSGDRDIDITGQSY
Subjt:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
TrEMBL top hitse value%identityAlignment
A0A0A0L393 Uncharacterized protein3.6e-49100Show/hide
Query:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
        MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
Subjt:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
A0A1S3BV26 uncharacterized protein LOC1034938022.1e-4189.22Show/hide
Query:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
        MENKQ+IEMEREQQRRE+SKKIEQEPPYYIS MQPLTE AYGGGMYGT++ GDQ+SLQ+KKVPAS TQSADGPV AEMKLKHPPPPSSGDRDIDITGQSY
Subjt:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
A0A6J1BT98 uncharacterized protein LOC1110055588.3e-3075.49Show/hide
Query:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
        ME  QKIEMERE+QRREE+KK+EQ+PP  IS MQPLTE AYGGGMYG ++ G Q  L  KK PAS TQSADGPV A MK KH PPPSSGDRDIDITGQSY
Subjt:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
A0A6J1FEB2 uncharacterized protein LOC1114432943.0e-3277.45Show/hide
Query:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
        ME  QK+EMEREQQRREE+KK+EQEPP+YIS MQPLTE AYGGGMYG ++ G Q SLQ  K PAS TQSADGPV + MK KH PPPSSGDRDIDITGQSY
Subjt:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
A0A6J1IJZ9 uncharacterized protein LOC1114769713.0e-3277.45Show/hide
Query:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY
        ME  QK+EMEREQQRREE+KK+EQEPP+YIS MQPLTE AYGGGMYG ++ G Q SLQ  K PAS TQSADGPV + MK KH PPPSSGDRDIDITGQSY
Subjt:  MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSY

Query:  FQ
        FQ
Subjt:  FQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42290.1 transcription activator-related1.6e-1748.18Show/hide
Query:  MEREQQRREESKKIEQEP----PYYISRMQPLTECAYGGGMYGTDDKGDQDSL-----------QIKKVPASTTQSADGP-VVAEMKLKHPPPPSSGDRD
        ME+E ++  E  + + EP    P YIS+MQP+T  AYGGG+YG DD+ +  +L           Q ++ PAS TQSADGP  V  +  KH  P SSGDRD
Subjt:  MEREQQRREESKKIEQEP----PYYISRMQPLTECAYGGGMYGTDDKGDQDSL-----------QIKKVPASTTQSADGP-VVAEMKLKHPPPPSSGDRD

Query:  IDITGQSYFQ
        +DITGQSY Q
Subjt:  IDITGQSYFQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACAAGCAGAAGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAAGAATCCAAGAAGATAGAGCAAGAACCGCCGTACTATATTTCTCGGATGCAGCCATTGAC
AGAATGTGCTTACGGCGGAGGAATGTACGGCACCGACGATAAAGGAGATCAGGACAGCCTGCAGATCAAGAAAGTACCTGCGAGCACAACGCAGAGCGCCGATGGACCAG
TTGTAGCGGAAATGAAGCTGAAGCATCCGCCTCCGCCGTCCTCAGGCGACAGAGACATCGATATCACCGGGCAATCGTATTTCCAGTAG
mRNA sequenceShow/hide mRNA sequence
GTGTTTTTTGGTGGAATTACCCTAAAATGGAAAACAAGCAGAAGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAAGAATCCAAGAAGATAGAGCAAGAACCGCCGTAC
TATATTTCTCGGATGCAGCCATTGACAGAATGTGCTTACGGCGGAGGAATGTACGGCACCGACGATAAAGGAGATCAGGACAGCCTGCAGATCAAGAAAGTACCTGCGAG
CACAACGCAGAGCGCCGATGGACCAGTTGTAGCGGAAATGAAGCTGAAGCATCCGCCTCCGCCGTCCTCAGGCGACAGAGACATCGATATCACCGGGCAATCGTATTTCC
AGTAGCCTGAAAAGCTCGTGAAGGCTTCCCCGGTCCGGTTGCGTATTGTAAATGCGTTTTAATAATGGCGATCGAGAGGTGTAGTTTGTTTATTCGTGTAATTTGGTTCG
TTTTCTTTACTCGATTAACGCGTTTCTTGTGGATCTATGAATGATTGAAACAGTTATTTCTAAGAGATTGAGTATACAACTTAACCTAAATTAATATGTAAAATTAGGAG
AAAACGAATTCAT
Protein sequenceShow/hide protein sequence
MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIKKVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSYFQ