; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G27140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G27140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-H2 finger protein ATL80
Genome locationChr4:23953512..23954069
RNA-Seq ExpressionCSPI04G27140
SyntenyCSPI04G27140
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608649.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]2.3e-9392.47Show/hide
Query:  MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVK+EG+DK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

XP_004145558.1 RING-H2 finger protein ATL8 [Cucumis sativus]3.6e-102100Show/hide
Query:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
        MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
Subjt:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS

Query:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
Subjt:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

XP_008453009.1 PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo]5.2e-10198.92Show/hide
Query:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
        MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG GAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
Subjt:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS

Query:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        DCAICLAEFAVGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
Subjt:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

XP_022941514.1 RING-H2 finger protein ATL80-like [Cucurbita moschata]3.0e-9392.47Show/hide
Query:  MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MR FRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK+EG+DK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

XP_038898612.1 RING-H2 finger protein ATL8 [Benincasa hispida]2.3e-9396.15Show/hide
Query:  MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGA STR PPPPASNKGLKKKILRSLPKYTFTAEFSAQF
Subjt:  MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTN
        SDCAICLAEF VGDEIRVLPQCGHGFHMSCID WFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTN
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTN

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y2 RING-type domain-containing protein1.7e-102100Show/hide
Query:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
        MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
Subjt:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS

Query:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
Subjt:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

A0A1S3BWC1 RING-H2 finger protein ATL802.5e-10198.92Show/hide
Query:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
        MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG GAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
Subjt:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS

Query:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        DCAICLAEFAVGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
Subjt:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

A0A5A7VGL3 RING-H2 finger protein ATL802.5e-10198.92Show/hide
Query:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
        MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG GAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS
Subjt:  MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFS

Query:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        DCAICLAEFAVGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
Subjt:  DCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

A0A6J1FA06 RING-H2 finger protein ATL80-like9.5e-9392.47Show/hide
Query:  MRPFRYLAGVNSSATSDTFEPR-YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MRPFRYLAGVNSSA SD+ EP+ YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAG+  G  STRPPPPPASNKGLKKKILRSLPKY FTAEFSAQF
Subjt:  MRPFRYLAGVNSSATSDTFEPR-YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        SDCAICLAEFAVGDEIRVLPQCGHGFH+SCID WFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT+RFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

A0A6J1FNK0 RING-H2 finger protein ATL80-like1.5e-9392.47Show/hide
Query:  MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF
        MR FRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQF

Query:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK+EG+DK NRFLP
Subjt:  SDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL441.3e-3547.65Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEI
        +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L+SLP+ TFTA  S           ++CAICL +FA G+EI
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEI

Query:  RVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        RVLP CGH FH+ CID W  S SSCPSCR+IL   +C +CG    +   +     +  +        FLP
Subjt:  RVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

Q8LC69 RING-H2 finger protein ATL84.9e-5457.78Show/hide
Query:  FRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFSD
        FR L   NS++ ++   P ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     +  T PPP  A+NKGLKKK+LRSLPK T++ +   + +  +
Subjt:  FRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFSD

Query:  CAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTN
        CAICL EFA GDE+RVLPQCGHGFH+SCIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K+  D   N
Subjt:  CAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTN

Q9LM69 RING-H2 finger protein ATL805.8e-5560.42Show/hide
Query:  FRYLAGVNS-SATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHL-AGDGGGAGS-TRPPPPP--ASNKGLKKKILRSLPKYTFTAEF--S
        FR L   N+ S   D      +SD V+ILAALLCALICVLGL+AV+RC WLR L AG+   +GS T+ P PP  A+NKGLKKK+L+SLPK TF+ E   S
Subjt:  FRYLAGVNS-SATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHL-AGDGGGAGS-TRPPPPP--ASNKGLKKKILRSLPKYTFTAEF--S

Query:  AQFSDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK---EEGDDKTNRFLP
         +F++CAICLAEF+ GDE+RVLPQCGHGFH++CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   +E  ++   ++G+D  N FLP
Subjt:  AQFSDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK---EEGDDKTNRFLP

Q9LZV8 RING-H2 finger protein ATL742.1e-2548.48Show/hide
Query:  TFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIR
        T +  +D++ VIILAALLCALI  LGL ++ RCA        G G  S+      A   GLKK+ L+  P   + + E     ++CAICL EFA G+ +R
Subjt:  TFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIR

Query:  VLPQCGHGFHMSCIDTWFRSHSSCPSCRQILV
        VLP C H FHMSCIDTW  SHSSCP+CR  L+
Subjt:  VLPQCGHGFHMSCIDTWFRSHSSCPSCRQILV

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL459.3e-3748.21Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSA----------------QFSDCAICLA
        ++D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L++LPK T+TA  S                   ++CAIC+ 
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSA----------------QFSDCAICLA

Query:  EFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEE
        EF+ G+EIR+LP C H FH++CID W  S SSCPSCR+ILV  +C +CG   +++      E++VK++
Subjt:  EFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEE

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein4.1e-5660.42Show/hide
Query:  FRYLAGVNS-SATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHL-AGDGGGAGS-TRPPPPP--ASNKGLKKKILRSLPKYTFTAEF--S
        FR L   N+ S   D      +SD V+ILAALLCALICVLGL+AV+RC WLR L AG+   +GS T+ P PP  A+NKGLKKK+L+SLPK TF+ E   S
Subjt:  FRYLAGVNS-SATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHL-AGDGGGAGS-TRPPPPP--ASNKGLKKKILRSLPKYTFTAEF--S

Query:  AQFSDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK---EEGDDKTNRFLP
         +F++CAICLAEF+ GDE+RVLPQCGHGFH++CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   +E  ++   ++G+D  N FLP
Subjt:  AQFSDCAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK---EEGDDKTNRFLP

AT1G76410.1 RING/U-box superfamily protein3.5e-5557.78Show/hide
Query:  FRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFSD
        FR L   NS++ ++   P ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     +  T PPP  A+NKGLKKK+LRSLPK T++ +   + +  +
Subjt:  FRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFSD

Query:  CAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTN
        CAICL EFA GDE+RVLPQCGHGFH+SCIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K+  D   N
Subjt:  CAICLAEFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTN

AT2G17450.1 RING-H2 finger A3A9.5e-3747.65Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEI
        +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L+SLP+ TFTA  S           ++CAICL +FA G+EI
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEI

Query:  RVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP
        RVLP CGH FH+ CID W  S SSCPSCR+IL   +C +CG    +   +     +  +        FLP
Subjt:  RVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

AT4G35480.1 RING-H2 finger A3B6.6e-3848.21Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSA----------------QFSDCAICLA
        ++D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L++LPK T+TA  S                   ++CAIC+ 
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSA----------------QFSDCAICLA

Query:  EFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEE
        EF+ G+EIR+LP C H FH++CID W  S SSCPSCR+ILV  +C +CG   +++      E++VK++
Subjt:  EFAVGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEE

AT5G01880.1 RING/U-box superfamily protein1.5e-2648.48Show/hide
Query:  TFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIR
        T +  +D++ VIILAALLCALI  LGL ++ RCA        G G  S+      A   GLKK+ L+  P   + + E     ++CAICL EFA G+ +R
Subjt:  TFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIR

Query:  VLPQCGHGFHMSCIDTWFRSHSSCPSCRQILV
        VLP C H FHMSCIDTW  SHSSCP+CR  L+
Subjt:  VLPQCGHGFHMSCIDTWFRSHSSCPSCRQILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCCCTTCAGGTACCTTGCCGGCGTCAACTCCTCCGCCACCTCCGATACGTTCGAGCCTAGGTATGATTCTGACTTCGTCATAATCCTCGCCGCCCTCCTCTGTGC
TTTGATTTGCGTCCTCGGTCTTGTTGCTGTTGCTCGTTGCGCCTGGCTACGCCACCTTGCTGGTGATGGTGGTGGCGCTGGTTCCACTCGTCCTCCGCCGCCTCCTGCTT
CCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCCAAGTACACCTTCACTGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCT
GTCGGTGATGAAATTCGTGTGCTGCCGCAGTGTGGCCATGGGTTTCACATGTCCTGCATCGATACCTGGTTCCGATCTCACTCTTCCTGTCCTTCCTGTCGTCAGATTCT
GGTGGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCGGCGAGCTCGAGTTCGAACGGCGGAACGGAATCCAGAGTGAAAGAGGAAGGAGATGATAAGACGAATAGGTTCT
TACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTCCCTTCAGGTACCTTGCCGGCGTCAACTCCTCCGCCACCTCCGATACGTTCGAGCCTAGGTATGATTCTGACTTCGTCATAATCCTCGCCGCCCTCCTCTGTGC
TTTGATTTGCGTCCTCGGTCTTGTTGCTGTTGCTCGTTGCGCCTGGCTACGCCACCTTGCTGGTGATGGTGGTGGCGCTGGTTCCACTCGTCCTCCGCCGCCTCCTGCTT
CCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCCAAGTACACCTTCACTGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCT
GTCGGTGATGAAATTCGTGTGCTGCCGCAGTGTGGCCATGGGTTTCACATGTCCTGCATCGATACCTGGTTCCGATCTCACTCTTCCTGTCCTTCCTGTCGTCAGATTCT
GGTGGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCGGCGAGCTCGAGTTCGAACGGCGGAACGGAATCCAGAGTGAAAGAGGAAGGAGATGATAAGACGAATAGGTTCT
TACCTTAG
Protein sequenceShow/hide protein sequence
MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFA
VGDEIRVLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP