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CSPI04G27180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G27180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLate embryogenesis abundant protein group 8 protein
Genome locationChr4:23965405..23965680
RNA-Seq ExpressionCSPI04G27180
SyntenyCSPI04G27180
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]3.6e-3995.4Show/hide
Query:  MEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI
        MEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYG EGHL PKPNQGGGTDAPTLSGSG PEVQPTTID+VTKQGLI
Subjt:  MEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI

KAE8649966.1 hypothetical protein Csa_012992 [Cucumis sativus]2.4e-43100Show/hide
Query:  MSNMEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLIR
        MSNMEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLIR
Subjt:  MSNMEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLIR

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]1.9e-2772Show/hide
Query:  MSNMEEQGQHQM------MGKM-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQ---GGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI
        MS  EEQ Q Q+      MGK  EEKA VE+LLPLESSPYVKYKDLEEYKR+GYG EGHL PKPNQ   GGGTDAPTLSG+G PEV+P+TID+ T QGLI
Subjt:  MSNMEEQGQHQM------MGKM-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQ---GGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]3.4e-2976.09Show/hide
Query:  MSNMEE--QGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI
        MSN EE  Q Q Q++ + EEK  VE+LLPLESSPYVKYKDLEEYKRKGYG EGHL PKPNQGGGTDAPTLSGSG PEV+P TID VT  GL+
Subjt:  MSNMEE--QGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]6.8e-3077.17Show/hide
Query:  MSNMEE--QGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI
        MSN EE  Q Q Q++ + EEKA VE+LLPLESSPYVKYKDLEEYKRKGYG EGHL PKPNQGGGTDAPTLSGSG PEV+P TID VT  GL+
Subjt:  MSNMEE--QGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein4.5e-35100Show/hide
Query:  MEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLIR
        MEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLIR
Subjt:  MEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLIR

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein1.8e-3995.4Show/hide
Query:  MEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI
        MEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYG EGHL PKPNQGGGTDAPTLSGSG PEVQPTTID+VTKQGLI
Subjt:  MEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI

A0A5C7HU36 Uncharacterized protein6.7e-1551.11Show/hide
Query:  MSNMEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQ-GGGTDAPTLSGSGLPEVQPTTIDIVTKQGL
        MSN  EQ       + +EK    + L +ESSPY+KY DLE+YKR+ YG +GHL  KPNQ GGGTDAPTL+G+GL + Q   +D   +QG+
Subjt:  MSNMEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQ-GGGTDAPTLSGSGLPEVQPTTIDIVTKQGL

A0A6J1C2A9 uncharacterized protein LOC1110076219.0e-2872Show/hide
Query:  MSNMEEQGQHQM------MGKM-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQ---GGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI
        MS  EEQ Q Q+      MGK  EEKA VE+LLPLESSPYVKYKDLEEYKR+GYG EGHL PKPNQ   GGGTDAPTLSG+G PEV+P+TID+ T QGLI
Subjt:  MSNMEEQGQHQM------MGKM-EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQ---GGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI

A0A6J1FA12 uncharacterized protein LOC1114436391.6e-2976.09Show/hide
Query:  MSNMEE--QGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI
        MSN EE  Q Q Q++ + EEK  VE+LLPLESSPYVKYKDLEEYKRKGYG EGHL PKPNQGGGTDAPTLSGSG PEV+P TID VT  GL+
Subjt:  MSNMEE--QGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 67.1e-0940.74Show/hide
Query:  KMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGG-TDAPTLS-----GSGLPEVQPTTIDIVTKQGL
        + E K    D L    +PY+ Y +LE+YK KGYG +GH  PK   GGG TDAPT S     G G      ++ D + +QG+
Subjt:  KMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGG-TDAPTLS-----GSGLPEVQPTTIDIVTKQGL

AT2G23110.2 Late embryogenesis abundant protein, group 67.1e-0940.74Show/hide
Query:  KMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGG-TDAPTLS-----GSGLPEVQPTTIDIVTKQGL
        + E K    D L    +PY+ Y +LE+YK KGYG +GH  PK   GGG TDAPT S     G G      ++ D + +QG+
Subjt:  KMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGG-TDAPTLS-----GSGLPEVQPTTIDIVTKQGL

AT2G23120.1 Late embryogenesis abundant protein, group 63.3e-0660.98Show/hide
Query:  SPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGG-TDAPTLSG
        SPY+    LE+YK K YG EGH  P P  GGG TDAPT SG
Subjt:  SPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGG-TDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 61.5e-1155.56Show/hide
Query:  MGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGG-TDAPTLSGSGLP
        M K EEK      LPLE+SPY KY+D+E+YK+  YG  GH   KP  GGG TDAPT SG   P
Subjt:  MGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGG-TDAPTLSGSGLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAACATGGAAGAGCAAGGACAGCACCAAATGATGGGGAAGATGGAAGAGAAGGCCCCGGTGGAAGATTTGCTGCCATTAGAGAGCAGTCCGTACGTGAAATATAA
AGACTTGGAAGAGTATAAAAGGAAAGGGTATGGGGTGGAGGGGCATCTTGTGCCCAAGCCTAATCAGGGCGGCGGCACCGATGCACCCACCTTGTCCGGCAGCGGCTTAC
CGGAGGTGCAGCCTACCACCATTGATATCGTTACCAAACAAGGCCTTATTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAACATGGAAGAGCAAGGACAGCACCAAATGATGGGGAAGATGGAAGAGAAGGCCCCGGTGGAAGATTTGCTGCCATTAGAGAGCAGTCCGTACGTGAAATATAA
AGACTTGGAAGAGTATAAAAGGAAAGGGTATGGGGTGGAGGGGCATCTTGTGCCCAAGCCTAATCAGGGCGGCGGCACCGATGCACCCACCTTGTCCGGCAGCGGCTTAC
CGGAGGTGCAGCCTACCACCATTGATATCGTTACCAAACAAGGCCTTATTCGTTGA
Protein sequenceShow/hide protein sequence
MSNMEEQGQHQMMGKMEEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQGGGTDAPTLSGSGLPEVQPTTIDIVTKQGLIR